Public SmartTables Directory

Welcome to SmartTables

A SmartTable is a collection of BioCyc objects, such as genes or metabolites, together with associated data, that can be created, edited, manipulated, and shared on the web.

[SmartTables Documentation] [Directory of SmartTables Users]

	SmartTable	Description	Organism	Type	Size	Owner	Update Time
1	Enzymes of a reaction from all reactions that involve the compound 3'-phosphoadenylyl-sulfate		H. sapiens	complexes, proteins	40	Tim Fallon	Mon Aug 19 2019 04:52 pm
2	Genes from H2O2 time series with \|TP7\| >1		E. coli K-12 substr. MG1655	all-genes	144	Suzanne Paley	Wed Aug 14 2019 04:28 pm
3	all reactions that involve one or more of the compounds (bromide, iodide, chloride)		MetaCyc	reactions	98	Tim Fallon	Sat Aug 10 2019 03:30 pm
4	3amFetal_cKO vs time		MetaCyc	pathways	8	Michael Jochum	Fri Jul 12 2019 11:28 am
5	Neo_cko 11pm and 3am vs time		MetaCyc	pathways	10	Michael Jochum	Fri Jul 12 2019 09:04 am
6	All promoters of E. coli K-12 substr. MG1655	Trying to get only s54..	E. coli K-12 substr. MG1655	promoters	3868	Amanda Wilczek	Fri Jun 07 2019 08:04 am
7	ST000061: Human metabolomics study of subcutaneous vs. visceral adipose tissue	This data is derived from dataset ST000061 in the Metabolomics Workbench data repository, and contai...	H. sapiens	compounds	107	Suzanne Paley	Tue Jun 04 2019 10:52 am
8	Essential genes in Mtb rich_Uncertain_Short_included	Table S2, S3, and S4	M. tuberculosis H37Rv	string, all-genes	601	Yusuke Minato	Fri May 24 2019 09:06 am
9	More essential in Mtb minimal		M. tuberculosis H37Rv	all-genes	130	Yusuke Minato	Fri May 24 2019 09:04 am
10	Pwys for Pathway Collage test.		E. coli K-12 substr. MG1655	pathways	5	Suzanne Paley	Mon May 20 2019 09:15 am
11	all_genes_pathways_reactions		E. coli B str. REL606	all-genes	4366	John Favate	Thu May 09 2019 09:37 am
12	Essential genes in Mtb YM rich identified by Tn-seq but not predicted by FBA		M. tuberculosis H37Rv	all-genes	136	Yusuke Minato	Tue May 07 2019 01:30 pm
13	Essential genes in Mtb rich predicted by FBA but not identified by Tn-seq		M. tuberculosis H37Rv	all-genes	42	Yusuke Minato	Tue May 07 2019 10:11 am
14	Tn-seq essential and highly conserved genes		M. tuberculosis H37Rv	all-genes	356	Yusuke Minato	Tue Apr 16 2019 04:26 pm
15	Essential genes in all three studies (Griffin et.al. DeJesus et al. Minato et.al.)		M. tuberculosis H37Rv	all-genes	458	Yusuke Minato	Tue Apr 16 2019 09:29 am
16	operon information	Description: gene name, function, operon name, regulation diagram, transcription factor regulator, b...	E. coli K-12 substr. MG1655	all-genes	95	Amanda Wilczek	Fri Mar 15 2019 11:53 am
17	More essential in Mtb rich		M. tuberculosis H37Rv	all-genes	98	Yusuke Minato	Mon Feb 25 2019 03:50 pm
18	All compounds of MetaCyc		MetaCyc	proteins, compounds	15263	Richard Billington	Fri Feb 22 2019 05:52 pm
19	Filtered rows from All reactions of E. coli K-12 substr. MG1655	Genes of Enzymatic-Reactions	E. coli K-12 substr. MG1655	reactions	720	Peter Midford	Tue Jan 15 2019 11:39 am
20	New SmartTable with isoprene		MetaCyc	pathways, compounds	2	Angel Mojarro	Tue Dec 18 2018 10:39 am

1 2 3 4 5 6 7 8 9 Next Show all

Specify List of Organism Databases

A
B
C
D
E
F
G
H
I
J
K
L
M
N
O
P
Q
R
S
T
U
V
W
X
Y
Z

Find in tree:

Find organisms whose property:

Database lists are saved as SmartTables that you can edit from your My SmartTables page.

Tier 1 and Tier 2 databases are displayed with orange and gray backgrounds, respectively.

Current Selection

0 databases or taxonomic groups currently selected.

Note: if you create a user account and log in, you can save your database lists for next time.