Public SmartTables Directory

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A SmartTable is a collection of BioCyc objects, such as genes or metabolites, together with associated data, that can be created, edited, manipulated, and shared on the web.

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	SmartTable	Description	Organism	Type	Size	Owner	Update Time
1	Enriched with FEPCU from FeC Vs NaC during anaerobic growth up-regulated proteins		K. oxytoca 10-5243	pathways	17	Giuseppe Gallo	Wed May 09 2018 09:52 am
2	Enriched with FEPCU from anaerobic Vs aerobic growth on FeC up-regulated proteins		K. oxytoca 10-5243	pathways	22	Giuseppe Gallo	Wed May 09 2018 09:51 am
3	essential genes of Clostridioides difficile R20291 from Dembek et al. (2015)	This is a table generated from a list of unambiguous essential genes in supplementary table S1 of De...	P. difficile R20291	string, all-genes	403	Ingrid Keseler	Fri May 04 2018 01:36 pm
4	BM25113_Gulucose_cum_mass_genome_view		E. coli K-12 substr. MG1655	transcription-units, promoters, all-genes	854	Neeraj Kumar	Wed Apr 18 2018 12:57 am
5	MetaCyc proteins with no genes and no Uniprot links		MetaCyc	compounds, proteins	2449	Ron Caspi	Tue Apr 10 2018 10:07 am
6	All genes of E. coli K-12 substr. MG1655		E. coli K-12 substr. MG1655	all-genes	4665	Peter Midford	Thu Apr 05 2018 05:05 pm
7	All genes of E. coli K-12 substr. MG1655		E. coli K-12 substr. MG1655	all-genes	4665	Peter Midford	Wed Mar 21 2018 01:09 pm
8	All compounds of MetaCyc		MetaCyc	proteins, compounds	14411	Joanna Wolthuis	Wed Mar 07 2018 06:30 am
9	Divisome		E. coli K-12 substr. MG1655	all-genes	4	John Sauls	Mon Mar 05 2018 11:20 am
10	Nitrogen cycling functional genes with and without Mussels	Frozen: CPM-normalized protein clusters (UniRef90) are given for each metagenomic sample (4 without ...		string	1919	ellen black	Mon Jan 29 2018 09:32 am
11	Mussel vs No mussel metagenomic potential (GO)	Relative abundance of protein clusters were mapped with Gene ontology functions.		string	2732	ellen black	Mon Jan 29 2018 09:31 am
12	Nitrogen cycling functional genes with and without Mussels	CPM-normalized protein clusters (UniRef90) are given for each metagenomic sample (4 without mussels,...		string	1919	ellen black	Sun Jan 28 2018 10:06 pm
13	Mussel vs No mussel metagenomic potential (ko)			string	2754	ellen black	Sat Jan 27 2018 04:57 am
14	Pathways from New column from N-metabolism		AraCyc col	pathways	4	Marco Salgado	Sat Jan 27 2018 01:10 am
15	Combined Membrane and Whole Proteome Only Erythromycin Proteins		E. coli K-12 substr. MG1655	proteins	205	Peijia Yuan	Fri Jan 26 2018 02:58 pm
16	UNION of Membrane Proteome Only Erythromycin Peptides and Whole Proteome Only Erythromycin Peptides		E. coli K-12 substr. MG1655	complexes, proteins	182	Peijia Yuan	Fri Jan 26 2018 02:56 pm
17	E. coli Protein Copy Number Data, estimates derived from genome-wide ribosome profiling	This table contains the absolute protein synthesis rates of E. coli proteins, derived from genome-wi...	E. coli K-12 substr. MG1655	all-genes	3402	Suzanne Paley	Mon Jan 22 2018 03:34 pm
18	Bioluminescence pathways		MetaCyc	pathways	7	Jeremy Zucker	Thu Dec 07 2017 03:46 pm
19	5 STRING from a list		E. coli K-12 substr. MG1655	all-genes	5	Anamika Kothari	Tue Nov 28 2017 11:51 am
20	Copy of all members of the class Transport Reactions			symbol	486	J. ENRIQUE SALCEDO-SORA	Tue Nov 21 2017 06:55 am

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