hide
show operations
OPERATIONS
Searching
change organism database
Sites
BioCyc
EcoCyc
MetaCyc
HumanCyc
BsubCyc
Pathway Tools
Search
Search Genes, Proteins or RNAs
Search Compounds
Search Reactions
Search Pathways
Search Growth Media
Advanced Search
Cross Organism Search
BLAST Search
BLAST All BioCyc
Google Search of this Site
Genome
Genome Browser
Genome Overview
Regulatory Overview
Browse Gene Ontology
Map Sequence Coordinates
Metabolism
Cellular Overview
Run Metabolic Model
Dead-end Metabolites
Chokepoint Reactions
Metabolic Route Search
Metabolite Translation Service
Pathway Collages
Browse Pathway Ontology
Browse Enzyme Commission Ontology
Browse Compound Ontology
Generate Metabolic Map Poster
Analysis
Comparative Analysis
Omics Data Analysis
Omics Dashboard
Summary Statistics
Metabolomics Pathway Coverage
List Functional Gene Clusters
Update Notifications
Reports
History of updates
Pathway evidence (sorted by score)
Pathway evidence (sorted by class)
Pathway holes
SmartTables
Public SmartTables
Special SmartTables
Help
Searching
Website User Guide
Webinars
Glossary
PGDB Concepts Guide
Guide to BioCyc
Contact Us/Licensing/Support
News
News
Update History
Information
Introduction to BioCyc
17043 Databases
Guided Tour
Pathway Tools Software
Pathway Tools Blog
Publications
Linking to BioCyc
Webinars
Contact Us
Services
Subscribe to BioCyc
Metabolic Posters
Genome Posters
Software/Database Downloads
Registry
Web Services
Request New BioCyc Genome
News
April 11, 2016
BioCyc to Adopt Subscription Model
Feb 14, 2018
Querying BioCyc Genomes by Gene Name
May 24, 2018
Announcing the New BioCyc RNA-Seq Data Analysis Service
Sep 3, 2019
Pathway Tools Newsletter
Dec 9, 2019
Pathway Tools Newsletter
©2019 SRI International, 333 Ravenswood Avenue, Menlo Park, CA 94025-3493
SRI International is an independent, nonprofit corporation.
Privacy policy
Disclaimer
Specify List of Organism Databases
Select One or More Databases:
By Name
By Taxonomy
By Organism Properties
My Lists
A
B
C
D
E
F
G
H
I
J
K
L
M
N
O
P
Q
R
S
T
U
V
W
X
Y
Z
Find in tree:
Find organisms whose property:
Select Property
has values
does not have values
has any value
has no value
Exact Match
Substring Match
= (approx.)
<
≤
>
≥
Select Values
AND
OR
Select Property
has values
does not have values
has any value
has no value
Exact Match
Substring Match
= (approx.)
<
≤
>
≥
Select Values
AND
OR
Select Property
has values
does not have values
has any value
has no value
Exact Match
Substring Match
= (approx.)
<
≤
>
≥
Select Values
AND
OR
Select Property
has values
does not have values
has any value
has no value
Exact Match
Substring Match
= (approx.)
<
≤
>
≥
Select Values
AND
OR
Select Property
has values
does not have values
has any value
has no value
Exact Match
Substring Match
= (approx.)
<
≤
>
≥
Select Values
AND
OR
Select Property
has values
does not have values
has any value
has no value
Exact Match
Substring Match
= (approx.)
<
≤
>
≥
Select Values
Shift-click to select a range; Ctrl-click to select multiple non-contiguous organisms.
Database lists are saved as SmartTables that you can edit from your
My SmartTables
page. To add organisms from a saved list, check the box next to the list name and then click the "Add" button.
Log in and reload this page to access your saved database lists.
Tier 1
and
Tier 2
databases are displayed with orange and gray backgrounds, respectively.
Current Selection
0
databases or taxa currently selected.
Note: if you create a user account and log in, you can save your database lists for next time.
hide
show operations