Public SmartTables Directory

Welcome to SmartTables

A SmartTable is a collection of BioCyc objects, such as genes or metabolites, together with associated data, that can be created, edited, manipulated, and shared on the web.

[SmartTables Documentation]  [Directory of SmartTables Users]

Sort upSort down SmartTable
Sort upSort down Description
Organism
Type
Size
Sort upSort down Owner
Sort upSort down Update Time
1Gold_standard_TF_binding_sites
Escherichia coli K-12 substr. MG1655
dna-binding-sites
57
Scott SaundersToday 11:47 am
2Gold_Standard_Transcription_units_public
Escherichia coli K-12 substr. MG1655
transcription-units
15
Scott SaundersToday 11:46 am
3New SmartTable with trpA
Bacillus subtilis subtilis 168, [Propionibacterium] humerusii P08, Mageeibacillus indolicus UPII9...
all-genes
4
Anamika KothariWed Nov 11 2020 09:39 am
4All compounds of MetaCyc
MetaCyc
compounds
16179
Joanna WolthuisWed Oct 28 2020 01:50 pm
5Cornerstone Cheeses
MetaCyc
reactions
5869
Ben RobinsonSun Oct 25 2020 03:32 pm
6Essential genes in Clostridioides difficile R20291SmartTable created from essential genes reported in Dembek et al., MBio 6(2):e02383 (2015).
Clostridioides difficile R20291
all-genes
377
Ingrid KeselerWed Sep 30 2020 09:23 am
7Growth-Status of all genes (E. coli K-12 substr. MG1655)
Escherichia coli K-12 substr. MG1655
all-genes
4708
Tatsuya SakaguchiThu Sep 24 2020 04:02 pm
8Copy number and essentiality of all genes (E. coli K-12 substr. MG1655)
Escherichia coli K-12 substr. MG1655
all-genes
4703
Tatsuya SakaguchiTue Sep 15 2020 08:41 am
9front-door regulatory motifsMatches all regulatory motifs of the form Cause -> Mediator -> Effect and Cause <- Regulator -> ...
Escherichia coli K-12 substr. MG1655
all-genes
151
Jeremy ZuckerTue Sep 01 2020 12:00 am
10New SmartTable - 2020-08-20T04:13:12-07:00
MetaCyc
pathways
387
Paschalis NatsidisThu Aug 20 2020 05:00 am
11COG-annotations-and-functional-groupsCOG annotations and functional classes Based on: Galperin MY, Makarova KS, Wolf YI, Koonin EV. Exp...
Escherichia coli K-12 substr. MG1655
all-genes
2834
H DeterTue Jul 21 2020 08:11 am
12Cellular state biomarkers
Bacillus subtilis subtilis 168
all-genes
11
YIMING HUANGSat Jul 04 2020 11:48 am
13All compounds of S. cerevisiae S288c
Saccharomyces cerevisiae S288c
proteins, compounds
1569
John W. K. OliverTue Jun 16 2020 10:35 pm
14GeneGO_Desulfovibriovulgaris
Desulfovibrio vulgaris Miyazaki F
all-genes
3226
Bryant ChambersWed May 13 2020 11:38 am
15RNA-seq data for RpoD_WT at 37C
Escherichia coli K-12 substr. MG1655
all-genes
4418
Bokyung SonWed May 06 2020 07:45 am
16All CG data E. coi vs TelluriteAll Chemical Genomics data from E. coli vs tellurite
Escherichia coli K-12 substr. MG1655
string, all-genes
3521
Roberto LuraschiTue May 05 2020 09:27 am
17E. coli binding-sitesTo generate this ST, I started with the special ST for all transcription factors. I then added the t...
Escherichia coli K-12 substr. MG1655
dna-binding-sites
3153
Suzanne PaleyMon Apr 27 2020 12:47 am
18DESeq ZC vs YC

string, all-genes
243
Matthew HinderhoferThu Apr 16 2020 10:07 am
19DESeq YC vs YMC

all-genes
43
Matthew HinderhoferThu Apr 16 2020 10:05 am
20DESeq ZC vs ZB

string, all-genes
548
Matthew HinderhoferThu Apr 16 2020 10:04 am
 1 2 3 4 5 6 7 8 9 10 11 Next Show all 

Report Errors or Provide Feedback
Page generated by Pathway Tools version 24.0 (software by SRI International) on Wed Nov 25, 2020, BIOCYC15.
MetaCyc version 24.1.