The pathways in MetaCyc were curated from a wide variety of organisms. Every pathway is labeled with the name of one or more taxonomic groups in which experiments have indicated that the pathway is present. These taxonomic designations include species names, species and strain names, and names of higher taxa such as genus names. When a high-level taxon, such as a genus, is present as a pathway label, the interpretation is that experimental evidence suggests that the pathway is present in all members of that taxon. This table provides the number of pathways associated with each of these taxonomic designations in the current version of MetaCyc.
Note that the fact that a pathway is labeled as occurring in a given taxon does not mean that the pathway does not in fact occur in other taxa. It may be that relevant experiments have not been done, or that MetaCyc curators have not yet curated the relevant literature.
| Organism | Number of pathways |
| Escherichia coli K-12 substr. MG1655 | 358 |
| Arabidopsis thaliana col | 345 |
| Homo sapiens | 319 |
| Saccharomyces cerevisiae | 195 |
| Rattus norvegicus | 87 |
| Pseudomonas aeruginosa | 80 |
| Solanum lycopersicum | 67 |
| Glycine max | 65 |
| Bacillus subtilis | 63 |
| Nicotiana tabacum | 58 |
| Mus musculus | 56 |
| Pisum sativum | 52 |
| Pseudomonas putida | 51 |
| Zea mays | 51 |
| Mycobacterium tuberculosis H37Rv | 49 |
| Salmonella enterica enterica serovar Typhimurium | 48 |
| Solanum tuberosum | 47 |
| Oryza sativa | 47 |
| Bacillus subtilis subtilis 168 | 44 |
| Synechocystis sp. PCC 6803 | 36 |
| Pseudomonas fluorescens | 33 |
| Mycobacterium tuberculosis | 32 |
| Methanocaldococcus jannaschii | 31 |
| Catharanthus roseus | 30 |
| Spinacia oleracea | 29 |
| Klebsiella pneumoniae | 28 |
| Hordeum vulgare | 28 |
| Klebsiella aerogenes | 27 |
| Triticum aestivum | 26 |
| Agrobacterium tumefaciens | 25 |
| Methanosarcina barkeri | 25 |
| Bos taurus | 24 |
| Saccharolobus solfataricus | 24 |
| Mycolicibacterium smegmatis | 24 |
| Staphylococcus aureus | 21 |
| Petunia x hybrida | 21 |
| Corynebacterium glutamicum | 21 |
| Sus scrofa | 20 |
| Chlamydomonas reinhardtii | 20 |
| Methanosarcina thermophila | 20 |
| Thermotoga maritima | 19 |
| Aspergillus niger | 19 |
| Methanothermobacter thermautotrophicus | 19 |
| Pseudomonas aeruginosa PAO1 | 19 |
| Medicago truncatula | 18 |
| Rhodobacter sphaeroides | 18 |
| Brassica napus | 18 |
| Delftia acidovorans | 18 |
| Rhodobacter capsulatus | 18 |
| Lactococcus lactis | 18 |
| Mycoplasma pneumoniae M129 | 17 |
| Cupriavidus necator | 17 |
| Cucumis sativus | 17 |
| Haloferax volcanii | 16 |
| Enterococcus faecalis | 16 |
| Paracoccus denitrificans | 16 |
| Geobacillus stearothermophilus | 16 |
| Aspergillus nidulans | 16 |
| Euglena gracilis | 16 |
| Allochromatium vinosum | 15 |
| Cupriavidus sp. PS12 | 15 |
| Clostridium acetobutylicum | 15 |
| Arabidopsis thaliana | 15 |
| Mammalia | 15 |
| Pyrococcus furiosus | 15 |
| Sinorhizobium meliloti | 15 |
| Streptomyces griseus | 15 |
| Azotobacter vinelandii | 15 |
| Methanosarcina | 14 |
| Acidithiobacillus ferrooxidans | 14 |
| Campylobacter jejuni | 14 |
| Cicer arietinum | 14 |
| Rubrivivax gelatinosus | 14 |
| Neurospora crassa | 14 |
| Streptococcus pneumoniae | 14 |
| Corynebacterium glutamicum ATCC 13032 | 14 |
| Vitis vinifera | 14 |
| Mycobacterium tuberculosis variant bovis | 14 |
| Oryza sativa Japonica Group | 14 |
| Ricinus communis | 14 |
| Medicago sativa | 13 |
| Bradyrhizobium japonicum | 13 |
| Chlorobaculum tepidum | 13 |
| Abies grandis | 12 |
| Sinorhizobium meliloti Rm2011 | 12 |
| Drosophila melanogaster | 12 |
| Serratia marcescens | 12 |
| Dianthus caryophyllus | 12 |
| Archaeoglobus fulgidus | 12 |
| Phaseolus vulgaris | 12 |
| Vibrio cholerae | 12 |
| Rhodospirillum rubrum | 12 |
| Pyrococcus horikoshii | 12 |
| Burkholderia cepacia | 12 |
| Synechococcus elongatus PCC 7942 | 12 |
| Methanosarcina acetivorans | 12 |
| Bacillus megaterium | 12 |
| Synechococcus sp. PCC 7002 | 12 |
| Cupriavidus pinatubonensis JMP134 | 11 |
| Camellia sinensis | 11 |
| Micrococcus luteus | 11 |
| Capsicum annuum | 11 |
| Methylorubrum extorquens AM1 | 11 |
| Rhodococcus rhodochrous | 11 |
| Halobacterium salinarum | 11 |
| Lupinus luteus | 11 |
| Lactobacillus casei | 11 |
| Deinococcus radiodurans | 11 |
| Gallus gallus | 11 |
| Clostridium sporogenes | 11 |
| Streptomyces coelicolor A3(2) | 11 |
| Bacillus cereus | 11 |
| Proteus vulgaris | 11 |
| Xanthomonas campestris | 10 |
| Perilla frutescens | 10 |
| Pinus taeda | 10 |
| Picea abies | 10 |
| Thiobacillus thioparus | 10 |
| Malus domestica | 10 |
| Fusarium fujikuroi | 10 |
| Clostridium acetobutylicum ATCC 824 | 10 |
| Lotus japonicus | 10 |
| Methanosarcina TM-1 | 10 |
| Trichoderma reesei | 10 |
| Salmonella enterica enterica serovar Typhimurium str. LT2 | 10 |
| Agrobacterium fabrum C58 | 10 |
| Pseudomonas putida mt-2 | 10 |
| Vigna radiata radiata | 10 |
| Citrobacter freundii | 10 |
| Clostridium pasteurianum | 10 |
| Rhodopseudomonas palustris | 10 |
| Helicobacter pylori | 10 |
| Thermus thermophilus | 10 |
| Aquifex aeolicus | 10 |
| Aspergillus fumigatus | 10 |
| Trichormus variabilis | 10 |
| Papaver somniferum | 9 |
| Linum usitatissimum | 9 |
| Rosa hybrid cultivar | 9 |
| Allium cepa | 9 |
| Ocimum basilicum | 9 |
| Oryctolagus cuniculus | 9 |
| Bacteroides fragilis | 9 |
| Desulfovibrio desulfuricans | 9 |
| Petroselinum crispum | 9 |
| Glycyrrhiza echinata | 9 |
| Prevotella ruminicola | 9 |
| Daucus carota | 9 |
| Cupriavidus necator H16 | 9 |
| Acinetobacter calcoaceticus | 9 |
| Solanum habrochaites | 9 |
| Pseudomonas putida KT2440 | 9 |
| Lactobacillus plantarum | 9 |
| Bacteroides thetaiotaomicron | 9 |
| Sphingomonas sp. SYK6 | 9 |
| Sulfurisphaera tokodaii | 9 |
| Helicobacter pylori 26695 | 9 |
| Bordetella pertussis | 9 |
| Chlamydia trachomatis | 9 |
| Secale cereale | 9 |
| Yersinia pseudotuberculosis | 8 |
| Cavia porcellus | 8 |
| Comamonas testosteroni | 8 |
| Fagopyrum esculentum | 8 |
| Acinetobacter baylyi ADP1 | 8 |
| Stenotrophomonas maltophilia | 8 |
| Prevotella oralis | 8 |
| Moorella thermoacetica | 8 |
| Pantoea agglomerans | 8 |
| Aeromonas hydrophila | 8 |
| Lactuca sativa romaine | 8 |
| Pseudomonas denitrificans (nomen rejiciendum) | 8 |
| Saccharomyces cerevisiae S288C | 8 |
| Lactobacillus brevis | 8 |
| Streptomyces fradiae | 8 |
| Mycolicibacterium phlei | 8 |
| Aspergillus flavus | 8 |
| Streptomyces antibioticus | 8 |
| Glycyrrhiza glabra | 8 |
| Plasmodium falciparum | 8 |
| Sinorhizobium meliloti 1021 | 8 |
| Azospirillum brasilense | 8 |
| Thauera aromatica | 8 |
| Haemophilus influenzae Rd KW20 | 8 |
| Arthrobacter globiformis | 8 |
| Sulfolobus acidocaldarius | 8 |
| Clostridium botulinum | 8 |
| Nostoc sp. PCC 7120 | 8 |
| Carthamus tinctorius | 8 |
| Pseudomonas sp. P51 | 7 |
| Pinus sylvestris | 7 |
| Escherichia coli W | 7 |
| Artemisia annua | 7 |
| Streptomyces clavuligerus | 7 |
| Thermus aquaticus | 7 |
| Pseudomonas | 7 |
| Pseudomonas syringae | 7 |
| Clostridium beijerinckii | 7 |
| Desulfovibrio vulgaris | 7 |
| Avena strigosa | 7 |
| Rhodococcus jostii RHA1 | 7 |
| Gluconobacter oxydans | 7 |
| Ruegeria pomeroyi DSS-3 | 7 |
| Penicillium chrysogenum | 7 |
| Escherichia coli B | 7 |
| Thermococcus kodakarensis | 7 |
| Rhodococcus opacus | 7 |
| Streptomyces avermitilis | 7 |
| Streptomyces coelicolor | 7 |
| Streptococcus agalactiae | 7 |
| Bacteroides vulgatus | 7 |
| Alcaligenes faecalis | 7 |
| Chromobacterium violaceum | 7 |
| Haemophilus influenzae | 7 |
| Methanococcus maripaludis | 7 |
| Sorghum bicolor | 7 |
| Thermoplasma acidophilum | 7 |
| Bacillus licheniformis | 7 |
| Nostoc punctiforme | 7 |
| Pseudomonas knackmussii | 6 |
| Pseudomonas reinekei | 6 |
| Coptis japonica | 6 |
| Mentha x piperita | 6 |
| Acidianus ambivalens | 6 |
| Methanococci | 6 |
| Xanthophyllomyces dendrorhous | 6 |
| Pseudomonas sp | 6 |
| Acidithiobacillus thiooxidans | 6 |
| Pimelobacter simplex | 6 |
| Shewanella oneidensis MR-1 | 6 |
| Ipomoea batatas | 6 |
| Yersinia enterocolitica | 6 |
| Hevea brasiliensis | 6 |
| Pseudomonas stutzeri | 6 |
| Fusarium oxysporum | 6 |
| Desulfovibrio gigas | 6 |
| Desulfotomaculum nigrificans | 6 |
| Pectobacterium carotovorum | 6 |
| Proteus mirabilis | 6 |
| Corynebacterium diphtheriae | 6 |
| Paracoccus versutus | 6 |
| Myxococcus fulvus | 6 |
| Streptomyces rimosus | 6 |
| Oenococcus oeni | 6 |
| Aeromonas caviae | 6 |
| Ginkgo biloba | 6 |
| Aspergillus oryzae | 6 |
| Haloarcula marismortui | 6 |
| Brucella abortus | 6 |
| Propionibacterium freudenreichii shermanii | 6 |
| Rhizobium leguminosarum | 6 |
| Vicia faba | 6 |
| Avena sativa | 6 |
| Clarkia breweri | 6 |
| Physcomitrella patens | 6 |
| Ralstonia pickettii | 6 |
| Bacillus anthracis | 6 |
| Cyberlindnera jadinii | 6 |
| Schizosaccharomyces pombe | 6 |
| Panax ginseng | 6 |
| Chlorobium limicola | 6 |
| Ralstonia solanacearum | 6 |
| Mycobacterium leprae | 6 |
| Bacillus circulans | 6 |
| Ustilago maydis | 6 |
| Gloeobacter violaceus | 6 |
| Pseudomonas nitroreducens | 5 |
| Citrus x paradisi | 5 |
| Methanobacteria | 5 |
| Methanococcus voltae | 5 |
| Prochlorococcus marinus pastoris CCMP1986 | 5 |
| Streptomyces | 5 |
| Penicillium aethiopicum | 5 |
| Dahlia pinnata | 5 |
| Dickeya chrysanthemi | 5 |
| Amanita muscaria | 5 |
| Delphinium grandiflorum | 5 |
| Citrus sinensis | 5 |
| Acidiphilium acidophilum | 5 |
| Kitasatospora aureofaciens | 5 |
| Pseudomonas oleovorans | 5 |
| Prevotella melaninogenica | 5 |
| Leuconostoc mesenteroides cremoris | 5 |
| Foeniculum vulgare | 5 |
| Methylobacillus flagellatus | 5 |
| Prevotella brevis | 5 |
| Microbacterium testaceum | 5 |
| Microbacterium saperdae | 5 |
| Microbacterium lacticum | 5 |
| Microbacterium liquefaciens | 5 |
| Clostridium perfringens | 5 |
| Pseudomonas chlororaphis chlororaphis | 5 |
| Rhodococcus erythropolis | 5 |
| Streptococcus mutans | 5 |
| Methanothermobacter thermautotrophicus Delta H | 5 |
| Lithospermum erythrorhizon | 5 |
| Porphyromonas asaccharolytica | 5 |
| Mycobacterium avium | 5 |
| Lactococcus lactis cremoris | 5 |
| Gordonia rubripertincta | 5 |
| Starkeya novella | 5 |
| Salmonella enterica enterica serovar Typhi | 5 |
| Thermococcus kodakarensis KOD1 | 5 |
| Leptospira interrogans | 5 |
| Brucella melitensis | 5 |
| Pseudomonas protegens Pf-5 | 5 |
| Streptomyces hygroscopicus | 5 |
| Aspergillus parasiticus | 5 |
| Klebsiella oxytoca | 5 |
| Micromonospora megalomicea | 5 |
| Clostridium kluyveri | 5 |
| Lupinus albus | 5 |
| Xanthobacter autotrophicus Py2 | 5 |
| Trifolium pratense | 5 |
| Pueraria montana lobata | 5 |
| Saccharopolyspora erythraea NRRL 2338 | 5 |
| Rhodococcus hoagii | 5 |
| Cutibacterium acnes | 5 |
| Aspergillus terreus | 5 |
| Neisseria meningitidis | 5 |
| Halorubrum saccharovorum | 5 |
| Yarrowia lipolytica | 5 |
| Brassica juncea | 5 |
| Zymomonas mobilis | 5 |
| Mesorhizobium loti | 5 |
| Mortierella alpina | 5 |
| Tetrahymena pyriformis | 5 |
| Azoarcus evansii | 5 |
| Rhodopseudomonas palustris CGA009 | 5 |
| Pyrococcus abyssi | 5 |
| Aeropyrum pernix | 5 |
| Vibrio harveyi | 5 |
| Thermus thermophilus HB8 | 5 |
| Thermoproteus tenax | 5 |
| Propionibacterium freudenreichii | 5 |
| Synechocystis | 5 |
| Bacillus pumilus | 5 |
| Cucumis melo | 5 |
| Lysinibacillus sphaericus | 5 |
| Methanothermobacter marburgensis Marburg | 5 |
| Mycobacterium marinum | 5 |
| Cannabis sativa | 5 |
| Veillonella parvula | 5 |
| Pogostemon cablin | 4 |
| Cutaneotrichosporon cutaneum | 4 |
| Rhodococcus erythropolis DCL14 | 4 |
| Zobellia galactanivorans | 4 |
| Citrus maxima | 4 |
| Arthrospira platensis | 4 |
| Cucurbita maxima | 4 |
| Hungateiclostridium thermocellum ATCC 27405 | 4 |
| Eschscholzia californica | 4 |
| Alcaligenes sp. O-1 | 4 |
| Pseudomonas putida ATCC 17453 | 4 |
| Cichorium intybus | 4 |
| Musca domestica | 4 |
| Methanothermus | 4 |
| Methanomicrobia | 4 |
| Pedobacter heparinus | 4 |
| Manihot esculenta | 4 |
| Mycobacterium | 4 |
| Shewanella putrefaciens | 4 |
| Pasteurella multocida | 4 |
| Matthiola incana | 4 |
| Pseudomonas mendocina | 4 |
| Synechococcus elongatus | 4 |
| Chromohalobacter salexigens DSM 3043 | 4 |
| Agapanthus africanus | 4 |
| Serratia plymuthica | 4 |
| Arthrobacter sp | 4 |
| Chrysosplenium americanum | 4 |
| Lotus corniculatus | 4 |
| Datura stramonium | 4 |
| Atropa belladonna | 4 |
| Pseudomonas fragi | 4 |
| Solanum pennellii | 4 |
| Leifsonia aquatica | 4 |
| Bacteroides ovatus | 4 |
| Bacteroides eggerthii | 4 |
| Pimpinella anisum | 4 |
| Pinus contorta | 4 |
| Aloe arborescens | 4 |
| Salinivibrio costicola | 4 |
| Bacillus thuringiensis | 4 |
| Gossypium hirsutum | 4 |
| Xanthobacter | 4 |
| Brevibacillus brevis S1 | 4 |
| Ogataea methanolica | 4 |
| [Candida] boidinii | 4 |
| Fusarium graminearum | 4 |
| Microbacterium imperiale | 4 |
| Microbacterium barkeri | 4 |
| Agromyces mediolanus | 4 |
| Streptomyces collinus | 4 |
| Acetobacterium woodii | 4 |
| Hyphomicrobium zavarzinii ZV580 | 4 |
| Methylobacterium organophilum | 4 |
| Coffea arabica | 4 |
| Botrytis cinerea | 4 |
| Rhizobiaceae | 4 |
| Bilophila wadsworthia RZATAU | 4 |
| Micrococcus luteus B-P 26 | 4 |
| Lactobacillus mali | 4 |
| Eisenibacter elegans | 4 |
| Blastochloris viridis | 4 |
| Caenorhabditis elegans | 4 |
| Curtobacterium flaccumfaciens | 4 |
| Marinomonas mediterranea MMB-1 | 4 |
| Paracoccus pantotrophus | 4 |
| Bombyx mori | 4 |
| Raphanus sativus | 4 |
| Vibrio parahaemolyticus | 4 |
| Methanosarcina mazei | 4 |
| Xanthomonas oryzae | 4 |
| Methanosarcina mazei Go1 | 4 |
| Pelobacter acetylenicus | 4 |
| Fusobacterium nucleatum | 4 |
| Streptomyces venezuelae | 4 |
| Escherichia coli C | 4 |
| Escherichia coli O157:H7 | 4 |
| Clostridium tetanomorphum | 4 |
| Clostridium saccharobutylicum | 4 |
| Thermosynechococcus elongatus BP-1 | 4 |
| Arabidopsis thaliana ler | 4 |
| Anaerotignum propionicum | 4 |
| Rhodobacter sphaeroides 2.4.1 | 4 |
| Roseovarius nubinhibens ISM | 4 |
| Dictyostelium discoideum | 4 |
| Aminobacter aminovorans | 4 |
| Cupriavidus metallidurans CH34 | 4 |
| Nostoc punctiforme PCC 73102 | 4 |
| Candida albicans | 4 |
| Acetobacter aceti | 4 |
| Pseudomonas putida F1 | 4 |
| Amycolatopsis mediterranei | 4 |
| Pseudomonas putida TW3 | 4 |
| Paraburkholderia xenovorans LB400 | 4 |
| Bacteroides fragilis NCTC 9343 | 4 |
| Methylococcus capsulatus | 4 |
| Lupinus angustifolius | 4 |
| Haloferax mediterranei | 4 |
| Aliivibrio fischeri | 4 |
| Chlorobaculum thiosulfatiphilum | 4 |
| Myxococcus xanthus | 4 |
| Clostridioides difficile | 4 |
| Acetoanaerobium sticklandii | 4 |
| Pseudomonas putida U | 4 |
| Pelobacter propionicus | 4 |
| Clostridium formicaceticum | 4 |
| Humulus lupulus | 4 |
| Nostoc sp. 36 | 4 |
| Allium ampeloprasum | 3 |
| Pseudomonas putida AC866 | 3 |
| Rhizophora stylosa | 3 |
| Kandelia candel | 3 |
| Ralstonia eutropha JMP222 | 3 |
| Burkholderia sp. RASC | 3 |
| Bradyrhizobium sp. RD5-C2 | 3 |
| Xanthobacter flavus 14p1 | 3 |
| Pseudomonas sp. PS14 | 3 |
| Sesamum indicum | 3 |
| Oryza sativa Japonica Group cultivar Nipponbare | 3 |
| Sinopodophyllum hexandrum | 3 |
| Podophyllum peltatum | 3 |
| Aedes aegypti | 3 |
| Portulaca grandiflora | 3 |
| Methylosinus trichosporium OB3b | 3 |
| Manduca sexta | 3 |
| Pseudomonas putida GB-1 | 3 |
| Sphingomonas wittichii RW1 | 3 |
| Pseudomonas alcaligenes NCIMB 9867 | 3 |
| Fagopyrum tataricum | 3 |
| Phanerochaete chrysosporium | 3 |
| Petrotoga miotherma | 3 |
| Thiobacillus denitrificans | 3 |
| Rosa chinensis | 3 |
| Penicillium digitatum | 3 |
| Vigna angularis | 3 |
| Populus trichocarpa | 3 |
| Thalictrum flavum | 3 |
| Berberis wilsoniae | 3 |
| Desulfobacterium autotrophicum | 3 |
| Aspergillus fischeri | 3 |
| Comamonas testosteroni T-2 | 3 |
| Campylobacter coli | 3 |
| Campylobacter jejuni jejuni NCTC 11168 = ATCC 700819 | 3 |
| Streptococcus thermophilus | 3 |
| Arthrobacter citreus | 3 |
| Streptomyces maritimus | 3 |
| Capra hircus | 3 |
| Mentha spicata | 3 |
| Crocus sativus | 3 |
| Chlorobium phaeobacteroides BS1 | 3 |
| Chlorobaculum limnaeum | 3 |
| Chlorobium phaeobacteroides DSM 266 | 3 |
| Xanthobacter autotrophicus | 3 |
| Ruta graveolens | 3 |
| [Haemophilus] ducreyi | 3 |
| Aggregatibacter actinomycetemcomitans | 3 |
| Chromohalobacter beijerinckii | 3 |
| Methanogenium | 3 |
| Pantoea ananatis | 3 |
| Achromobacter xylosoxidans NCIMB 10751 | 3 |
| Gossypium barbadense | 3 |
| Gossypium arboreum | 3 |
| Komagataeibacter xylinus | 3 |
| Acremonium chrysogenum | 3 |
| Triglochin maritima | 3 |
| Streptomyces spectabilis | 3 |
| Brevibacterium helvolum | 3 |
| Fusarium solani | 3 |
| Aspergillus aculeatus | 3 |
| Ipomoea nil | 3 |
| Ochrobactrum anthropi ATCC 49188 | 3 |
| Agrobacterium radiobacter K84 | 3 |
| Trichormus variabilis ATCC 29413 | 3 |
| Enterococcus faecium | 3 |
| Amycolatopsis lactamdurans | 3 |
| Silene dioica | 3 |
| Dickeya dadantii 3937 | 3 |
| Vigna aconitifolia | 3 |
| Mesocricetus auratus | 3 |
| Bacteroides vulgatus ATCC 8482 | 3 |
| Flammulina velutipes | 3 |
| Juglans regia | 3 |
| Citrus unshiu | 3 |
| Phaeodactylum tricornutum | 3 |
| Thiobacillus sp. W5 | 3 |
| Rhodomicrobium vannielii | 3 |
| Hyoscyamus niger | 3 |
| Paracoccus denitrificans NKNIS | 3 |
| Mycolicibacterium vaccae | 3 |
| Corynebacterium flavescens | 3 |
| Brassica oleracea | 3 |
| Parabacteroides distasonis | 3 |
| Crocosphaera subtropica ATCC 51142 | 3 |
| Mycolicibacterium fortuitum | 3 |
| Rhodococcus hoagii 103S | 3 |
| Ovis aries | 3 |
| Methanohalophilus portucalensis | 3 |
| Halorhodospira halochloris | 3 |
| Aphanothece halophytica | 3 |
| Diaporthe amygdali | 3 |
| Sporosarcina ureae | 3 |
| Staphylococcus epidermidis | 3 |
| Staphylococcus haemolyticus | 3 |
| Staphylococcus warneri | 3 |
| Caulobacter vibrioides CB15 | 3 |
| Actinidia chinensis | 3 |
| Epichloe festucae | 3 |
| Chlamydia pneumoniae | 3 |
| Linum nodiflorum | 3 |
| Linum flavum | 3 |
| Aves | 3 |
| Xanthomonas arboricola | 3 |
| Zingiber officinale | 3 |
| Arthrobacter crystallopoietes | 3 |
| Leuconostoc lactis | 3 |
| Lactobacillus helveticus | 3 |
| Acidovorax citrulli | 3 |
| Salvia officinalis | 3 |
| Rhodococcus YH3-3 | 3 |
| Taxus cuspidata | 3 |
| Pinus strobus | 3 |
| Thermococcus litoralis | 3 |
| Leuconostoc mesenteroides | 3 |
| Bacillus methanolicus | 3 |
| Aromatoleum aromaticum EbN1 | 3 |
| Streptomyces bikiniensis | 3 |
| Staphylococcus capitis | 3 |
| Salmonella enterica | 3 |
| Phaseolus lunatus | 3 |
| Burkholderia glumae | 3 |
| Burkholderia pseudomallei | 3 |
| Chromohalobacter salexigens | 3 |
| Crithidia fasciculata | 3 |
| Sinomonas atrocyanea | 3 |
| Streptomyces roseochromogenus oscitans | 3 |
| Actinoalloteichus cyanogriseus | 3 |
| Mycobacterium gastri MN19 | 3 |
| Apis mellifera | 3 |
| Streptomyces peucetius caesius | 3 |
| Ogataea angusta | 3 |
| Komagataella pastoris | 3 |
| Ogataea minuta | 3 |
| Methylocystis pyriformis | 3 |
| Methylocystis parvus | 3 |
| Methylocystis minimus | 3 |
| Methylocystis echinoides | 3 |
| Methylobacter whittenburyi | 3 |
| Populus deltoides | 3 |
| Vibrio cholerae O1 | 3 |
| Streptomyces lavendulae | 3 |
| Nocardioides sp. JS614 | 3 |
| Metallosphaera sedula | 3 |
| Danio rerio | 3 |
| Camellia ptilophylla | 3 |
| Camellia sinensis assamica | 3 |
| Clostridium butyricum | 3 |
| Pseudomonas putida CBB5 | 3 |
| Pediococcus pentosaceus | 3 |
| Wolinella succinogenes | 3 |
| Lycopersicon hirsutum glabratum | 3 |
| Cyanidium caldarium | 3 |
| Tsukamurella paurometabola | 3 |
| Porphyromonas levii | 3 |
| Phaeospirillum molischianum | 3 |
| Phaeospirillum fulvum | 3 |
| Odoribacter splanchnicus | 3 |
| Mycobacterium intracellulare | 3 |
| Mycolicibacterium farcinogenes | 3 |
| Mycobacterium avium paratuberculosis | 3 |
| Jonesia denitrificans | 3 |
| Gordonia terrae | 3 |
| Gordonia bronchialis | 3 |
| Dermatophilus congolensis | 3 |
| Curtobacterium luteum | 3 |
| Curtobacterium citreum | 3 |
| Curtobacterium albidum | 3 |
| Clavibacter michiganensis sepedonicus | 3 |
| Clavibacter michiganensis nebraskensis | 3 |
| Clavibacter michiganensis insidiosus | 3 |
| Clavibacter michiganensis | 3 |
| Brevibacterium fuscum | 3 |
| Glutamicibacter protophormiae | 3 |
| Saccharopolyspora spinosa | 3 |
| Pseudoalteromonas phenolica O-BC30 | 3 |
| Pseudoalteromonas luteoviolacea 2ta16 | 3 |
| Pyrobaculum calidifontis | 3 |
| Burkholderia thailandensis | 3 |
| Aspergillus versicolor | 3 |
| Spodoptera littoralis | 3 |
| Raoultella terrigena | 3 |
| Vibrio vulnificus CMCP6 | 3 |
| Vibrio alginolyticus | 3 |
| Methanosarcina acetivorans C2A | 3 |
| Actinidia deliciosa | 3 |
| Bradyrhizobium elkanii | 3 |
| Porphyromonas gingivalis | 3 |
| Bifidobacterium longum | 3 |
| Entamoeba histolytica | 3 |
| Rhodococcus ruber | 3 |
| Arabidopsis thaliana Cvi | 3 |
| Giardia intestinalis | 3 |
| Petrotoga mobilis | 3 |
| Caldanaerobacter subterraneus tengcongensis | 3 |
| Pseudomonas fluorescens Pf0-1 | 3 |
| Hyphomicrobium sulfonivorans | 3 |
| Morganella morganii | 3 |
| Shewanella sp. ANA-3 | 3 |
| Saccharopolyspora erythraea | 3 |
| Acidipropionibacterium acidipropionici | 3 |
| Desulfobulbus propionicus | 3 |
| [Ruminococcus] gnavus ATCC 29149 | 3 |
| Aerococcus viridans | 3 |
| Saccharolobus solfataricus P2 | 3 |
| Eggerthella lenta DSM 2243 | 3 |
| Sinorhizobium fredii NGR234 | 3 |
| Fasciola hepatica | 3 |
| Crassostrea gigas | 3 |
| Ascaris suum | 3 |
| Ascaris lumbricoides | 3 |
| Clostridium | 3 |
| Pelomonas saccharophila | 3 |
| Limonium latifolium | 3 |
| Nicotiana attenuata | 3 |
| Shewanella oneidensis | 3 |
| Halococcus saccharolyticus | 3 |
| Legionella pneumophila | 3 |
| Pectobacterium atrosepticum SCRI1043 | 3 |
| Burkholderia cenocepacia J2315 | 3 |
| Aspergillus rugulosus | 3 |
| Pseudomonas sp. CF600 | 3 |
| Comamonas sp. JS765 | 3 |
| Limnanthes alba | 3 |
| Hypericum androsaemum | 3 |
| Allium sativum | 3 |
| Ralstonia sp. U2 | 3 |
| Pseudomonas sp. NCIB9816-4 | 3 |
| Rebecca salina | 3 |
| Pavlova sp. CCMP459 | 3 |
| Isochrysis galbana | 3 |
| Pseudomonas sp. NT4 | 3 |
| Stigmatella aurantiaca | 3 |
| Nannocystis exedens | 3 |
| Gemmata obscuriglobus | 3 |
| Scutellaria baicalensis | 3 |
| Methylococcus capsulatus Bath | 3 |
| Pyrobaculum islandicum | 3 |
| Treponema denticola | 3 |
| Nicotiana sylvestris | 3 |
| Hypericum perforatum | 3 |
| Virgibacillus pantothenticus | 3 |
| Sporosarcina pasteurii | 3 |
| Methanobacterium bryantii | 3 |
| Limnanthes douglasii | 3 |
| Amorpha fruticosa | 2 |
| Populus nigra | 2 |
| Aphanizomenon flos-aquae | 2 |
| Aspergillus sp. MF297-2 | 2 |
| Allium victorialis | 2 |
| Allium ochotense | 2 |
| Allium chinense | 2 |
| Allium ascalonicum | 2 |
| Allium altyncolicum | 2 |
| Allium altaicum | 2 |
| Allium aflatunense | 2 |
| Capsicum chinense | 2 |
| Aspergillus terricola | 2 |
| Beta vulgaris | 2 |
| Celosia cristata | 2 |
| Ralstonia eutropha NH9 | 2 |
| Bruguiera gymnorhiza | 2 |
| Betula platyphylla japonica | 2 |
| Pseudomonas citronellolis | 2 |
| Gentiana straminea | 2 |
| Adiantum capillus-veneris | 2 |
| Meyerozyma guilliermondii | 2 |
| Stellaria media | 2 |
| Brassica oleracea botrytis | 2 |
| Neisseria meningitidis Z2491 | 2 |
| Neisseria gonorrhoeae MS11 | 2 |
| Neisseria gonorrhoeae FA 1090 | 2 |
| Santalum album | 2 |
| Solidago canadensis | 2 |
| Tanacetum parthenium | 2 |
| Streptomyces sp. SA-COO | 2 |
| Anthriscus sylvestris | 2 |
| Zingiber zerumbet | 2 |
| Chlorobaculum tepidum TLS | 2 |
| Trichoderma brevicompactum | 2 |
| Trichoderma arundinaceum | 2 |
| Fusarium sporotrichioides | 2 |
| Lactobacillus reuteri | 2 |
| Aurantimonas manganoxydans SI85-9A1 | 2 |
| Linum perenne | 2 |
| Rhodococcus sp. strain MS11 | 2 |
| Sesamum radiatum | 2 |
| Vibrio furnissii | 2 |
| Vibrio cholerae O1 biovar El Tor str. N16961 | 2 |
| Vibrio cholerae non-O1 | 2 |
| Klebsiella michiganensis M5al | 2 |
| Ruminiclostridium papyrosolvens | 2 |
| Ruminiclostridium josui | 2 |
| Ruminiclostridium cellulolyticum | 2 |
| Ruminococcus albus | 2 |
| Hungateiclostridium thermocellum | 2 |
| Pseudobacteroides cellulosolvens | 2 |
| Clostridium cellulovorans | 2 |
| Hungateiclostridium cellulolyticum | 2 |
| Thiocapsa roseopersicina | 2 |
| Lens culinaris | 2 |
| Candida tropicalis | 2 |
| Candida maltosa | 2 |
| Anchusa officinalis | 2 |
| Plectranthus scutellarioides | 2 |
| Vibrio cholerae O139 | 2 |
| Salmonella enterica enterica serovar Agona | 2 |
| Pseudomonas chlororaphis B23 | 2 |
| Cupriavidus nantongensis | 2 |
| Flaveria bidentis | 2 |
| Pseudomonas sp. gs1 | 2 |
| Eustoma exaltatum russellianum | 2 |
| Castellaniella defragrans | 2 |
| Pinus densiflora | 2 |
| Ralstonia sp. JS668 | 2 |
| Burkholderia sp. JS667 | 2 |
| Glebionis segetum | 2 |
| Pseudoalteromonas carrageenovora | 2 |
| Pseudomonas putida NCIB 9869 | 2 |
| Coreopsis grandiflora | 2 |
| Antirrhinum majus | 2 |
| Pseudomonas sp. CA10 | 2 |
| Aspergillus japonicus | 2 |
| Sphingobium fuliginis | 2 |
| Ideonella sakaiensis | 2 |
| Dehalococcoides mccartyi | 2 |
| Rhodothermus marinus | 2 |
| Silene latifolia | 2 |
| Leucaena leucocephala | 2 |
| Citrus aurantium | 2 |
| Canavalia lineata | 2 |
| Canavalia ensiformis | 2 |
| Galleria mellonella | 2 |
| Methylovorus mays | 2 |
| Methyloversatilis universalis | 2 |
| Methylocella silvestris | 2 |
| Corynebacterium glutamicum R | 2 |
| Corallococcus coralloides | 2 |
| Xanthomonas sp. 35Y | 2 |
| Pseudomonas savastanoi pv. phaseolicola | 2 |
| Anemone leveillei | 2 |
| Methanococcus aeolicus | 2 |
| Methanobrevibacter smithii | 2 |
| Methanobrevibacter arboriphilus | 2 |
| Leptospira interrogans serovar Lai str. 56601 | 2 |
| Leptospira interrogans serovar Bataviae | 2 |
| Persea americana | 2 |
| Vanilla planifolia | 2 |
| Pseudomonas putida 77 | 2 |
| Azoarcus sp. T | 2 |
| Argemone mexicana | 2 |
| Persephonella marina | 2 |
| Aspergillus niger ATCC 1015 | 2 |
| Pseudomonas putida NCIMB 9866 | 2 |
| Pseudomonas mendocina (pWWO) or (pTOL) | 2 |
| Berberis stolonifera | 2 |
| Desulfuromonas acetoxidans | 2 |
| Magnolia grandiflora | 2 |
| Cryptosporidium parvum | 2 |
| Streptococcus sanguinis | 2 |
| Streptococcus salivarius | 2 |
| Chloroflexus aurantiacus J-10-fl | 2 |
| Thermotoga neapolitana | 2 |
| Phaseolus coccineus | 2 |
| Coptis chinensis | 2 |
| Claviceps purpurea | 2 |
| Paenarthrobacter ureafaciens | 2 |
| Corydalis vaginans | 2 |
| Sanguinaria canadensis | 2 |
| Pseudomonas putida HS12 | 2 |
| Comamonas testosteroni CNB-1 | 2 |
| Rauvolfia serpentina | 2 |
| Streptomyces olivaceus | 2 |
| Oncorhynchus mykiss | 2 |
| Aliivibrio salmonicida LFI1238 | 2 |
| Plesiocystis pacifica | 2 |
| Enhygromyxa salina | 2 |
| Digitalis purpurea | 2 |
| Digitalis lanata | 2 |
| Weissella viridescens | 2 |
| Streptococcus pasteurianus | 2 |
| Pseudarthrobacter polychromogenes | 2 |
| Kocuria rosea | 2 |
| Cyberlindnera mrakii | 2 |
| Sorbus aucuparia | 2 |
| Lactococcus lactis lactis | 2 |
| Pseudomonas sp. NCIB 8858 | 2 |
| Ophiorrhiza pumila | 2 |
| Ophiorrhiza japonica | 2 |
| Nothapodytes nimmoniana | 2 |
| Camptotheca acuminata | 2 |
| Micromonospora sp. ACM2-092 | 2 |
| Micromonospora sp. ML1 | 2 |
| Gluconobacter cerinus | 2 |
| Gluconobacter albidus | 2 |
| Mastigocladus laminosus | 2 |
| Cyberlindnera saturnus | 2 |
| Bixa orellana | 2 |
| Arabidopsis lyrata | 2 |
| Gardenia jasminoides | 2 |
| Achromobacter denitrificans | 2 |
| Streptomyces albus | 2 |
| Clostridium botulinum A str. ATCC 19397 | 2 |
| Cyclotella meneghiniana | 2 |
| Daphne odora | 2 |
| Fragaria | 2 |
| Melilotus albus | 2 |
| Xanthomonas citri | 2 |
| Halorhodospira halophila | 2 |
| Acinetobacter calcoaceticus anitratus | 2 |
| Achromobacter ruhlandii | 2 |
| Acidovorax facilis | 2 |
| Streptomyces rimosus rimosus ATCC 10970 | 2 |
| Xanthomonas axonopodis | 2 |
| Cytophaga hutchinsonii | 2 |
| Trichophyton benhamiae | 2 |
| Coffea canephora | 2 |
| Desulfocapsa sulfexigens | 2 |
| [Pseudomonas] geniculata | 2 |
| Halomonas halodenitrificans | 2 |
| Halomonas halmophila | 2 |
| Acetobacter pasteurianus | 2 |
| Methanoculleus | 2 |
| Methanopyri | 2 |
| Streptomyces sp. XZQH13 | 2 |
| Streptomyces flaveolus | 2 |
| Brevundimonas sp. SD212 | 2 |
| Nocardia | 2 |
| Methanospirillum | 2 |
| Fusarium heterosporum | 2 |
| Lactobacillus fermentum | 2 |
| Bacteroides thetaiotaomicron VPI-5482 | 2 |
| Pelobacter carbinolicus | 2 |
| Brevibacterium linens | 2 |
| Adonis aestivalis palaestina | 2 |
| Synechococcus elongatus PCC 6301 | 2 |
| Prochlorococcus marinus MIT 9313 | 2 |
| Gloeobacter violaceus PCC 7421 | 2 |
| Cyanothece sp. PCC 7425 | 2 |
| Burkholderia lata | 2 |
| Acinetobacter | 2 |
| Ectocarpus siliculosus | 2 |
| Klebsiella oxytoca TauN1 | 2 |
| Desulfovibrio alaskensis G20 | 2 |
| Streptomyces griseus griseus NBRC 13350 | 2 |
| Desulfonispora thiosulfatigenes GKNTAU | 2 |
| Castellaniella denitrificans | 2 |
| Vigna radiata | 2 |
| Aureobasidium pullulans | 2 |
| Streptomyces sp. FR-008 | 2 |
| Trichoderma viride | 2 |
| Aspergillus awamori | 2 |
| Streptomyces triostinicus | 2 |
| Streptomyces lasaliensis | 2 |
| Streptomyces griseovariabilis bandungensis | 2 |
| Rhizobium leguminosarum bv. viciae | 2 |
| Rhizobium leguminosarum bv. trifolii | 2 |
| Pseudomonas chlororaphis aureofaciens 30-84 | 2 |
| Edwardsiella tarda | 2 |
| Streptomyces anulatus | 2 |
| Pectobacterium carotovorum carotovorum WPP14 | 2 |
| Paraburkholderia graminis C4D1M | 2 |
| Yersinia pestis | 2 |
| Corynebacterium sp | 2 |
| Streptomyces arginensis | 2 |
| Clitoria ternatea | 2 |
| Streptomyces chrestomyceticus | 2 |
| Candidatus Nitrososphaera gargensis Ga9.2 | 2 |
| Erwinia chrysanthemi EC16 | 2 |
| Salvia splendens | 2 |
| Glandularia x hybrida | 2 |
| Plasmodium falciparum 3D7 | 2 |
| Gentiana triflora | 2 |
| Halomonas elongata | 2 |
| Sinningia cardinalis | 2 |
| Saussurea medusa | 2 |
| Sesbania rostrata | 2 |
| Citrus japonica | 2 |
| Pseudomonas sp. WBC-3 | 2 |
| Pseudomonas sp. A3 | 2 |
| Escherichia coli CFT073 | 2 |
| Rhodotorula glutinis | 2 |
| Methylorubrum extorquens | 2 |
| Equisetum arvense | 2 |
| Sphingobium chlorophenolicum | 2 |
| Pseudomonas sp. 1-7 | 2 |
| Cupriavidus basilensis | 2 |
| Penicillium glabrum | 2 |
| Thermithiobacillus tepidarius | 2 |
| Pseudaminobacter salicylatoxidans | 2 |
| Annwoodia aquaesulis | 2 |
| Advenella mimigardefordensis | 2 |
| Desmodium uncinatum | 2 |
| Chlorella sp. (Roon 68) | 2 |
| Sinorhizobium fredii | 2 |
| Mycolicibacterium smegmatis MC2 155 | 2 |
| Hyoscyamus albus | 2 |
| Staphylococcus aureus aureus ATCC 25923 | 2 |
| Bifidobacterium longum SBT2928 | 2 |
| Rathayibacter iranicus | 2 |
| Rathayibacter tritici | 2 |
| Actinomyces bovis | 2 |
| Nocardiopsis dassonvillei | 2 |
| Pseudarthrobacter sulfonivorans | 2 |
| Arthrobacter methylotrophus | 2 |
| Rubia tinctorum | 2 |
| Mycobacterium kansasii | 2 |
| Galium mollugo | 2 |
| Comamonas testosteroni TA441 | 2 |
| Rhodococcus sp. SQ1 | 2 |
| Actinopolyspora halophila | 2 |
| Aquifex aeolicus VF5 | 2 |
| Bacillus alcalophilus | 2 |
| Domibacillus aminovorans | 2 |
| Bacillus amyloliquefaciens | 2 |
| Bacillus badius | 2 |
| Bacillus coagulans | 2 |
| Bacillus firmus | 2 |
| Psychrobacillus insolitus | 2 |
| Bacillus psychrosaccharolyticus | 2 |
| Bacillus racemilacticus | 2 |
| Sporolactobacillus inulinus | 2 |
| Brochothrix thermosphacta | 2 |
| Listeria grayi | 2 |
| Staphylococcus cohnii | 2 |
| Staphylococcus hominis | 2 |
| Staphylococcus saprophyticus | 2 |
| Staphylococcus simulans | 2 |
| Exiguobacterium acetylicum | 2 |
| Bacillus halotolerans | 2 |
| Desmonostoc muscorum | 2 |
| Acer pseudoplatanus | 2 |
| Geminocystis herdmanii PCC 6308 | 2 |
| Mesembryanthemum crystallinum | 2 |
| Musa acuminata | 2 |
| Beta vulgaris vulgaris | 2 |
| [Nectria] haematococca | 2 |
| Prevotella intermedia | 2 |
| Stevia rebaudiana | 2 |
| Thermobifida fusca | 2 |
| Streptomyces parvulus | 2 |
| Curcuma longa | 2 |
| Pseudomonas sp. ADP | 2 |
| Lactococcus lactis lactis bv. diacetylactis | 2 |
| Beauveria bassiana | 2 |
| Staphylococcus sciuri sciuri | 2 |
| Staphylococcus lentus | 2 |
| Capnocytophaga sputigena | 2 |
| Capnocytophaga ochracea | 2 |
| Capnocytophaga gingivalis | 2 |
| Cistus creticus | 2 |
| Herbaspirillum huttiense strain NRRL B-12228 | 2 |
| Amycolatopsis methanolica | 2 |
| Taxus chinensis | 2 |
| Piper methysticum | 2 |
| Methylophilus methylotrophus W3A1 | 2 |
| Methylophaga thalassica | 2 |
| Methylomonas sp. J | 2 |
| Brevundimonas vesicularis | 2 |
| Burkholderia gladioli | 2 |
| Rubus idaeus | 2 |
| Rheum palmatum | 2 |
| Polygonum cuspidatum | 2 |
| Listeria innocua | 2 |
| Aspergillus stellatus | 2 |
| Salinispora arenicola | 2 |
| Halorubrum trapanicum | 2 |
| Halococcus morrhuae | 2 |
| Glutamicibacter nicotianae | 2 |
| Enterococcus casseliflavus | 2 |
| Populus tremula x Populus tremuloides | 2 |
| Acinetobacter sp. NCIMB9871 | 2 |
| Neisseriaceae | 2 |
| Thauera butanivorans | 2 |
| Burkholderia plantarii | 2 |
| Halomonas elongata DSM 2581 | 2 |
| Streptomyces rishiriensis | 2 |
| Methylomonas aminofaciens 77a | 2 |
| Periplaneta americana | 2 |
| Streptomyces peucetius | 2 |
| Methylosinus trichosporium | 2 |
| Methylosinus sporium | 2 |
| Fusarium verticillioides | 2 |
| Lactobacillus buchneri | 2 |
| Trypanosoma cruzi | 2 |
| Burkholderia sp. WS | 2 |
| Pectobacterium carotovorum carotovorum | 2 |
| Paenarthrobacter nicotinovorans | 2 |
| Eubacterium limosum | 2 |
| Acetobacterium carbinolicum | 2 |
| Clostridium perfringens 13 | 2 |
| Chloroflexus aurantiacus | 2 |
| Hyphomicrobium methylovorum GM2 | 2 |
| Blautia producta | 2 |
| Agrobacterium sp. DSM 8888 | 2 |
| Pseudomonas sp. AK-1 | 2 |
| Alicycliphilus denitrificans | 2 |
| Camellia irrawadiensis | 2 |
| Sulfurisphaera tokodaii 7 | 2 |
| Azospirillum lipoferum | 2 |
| Streptomyces venezuelae ATCC 10712 | 2 |
| Rhizobium phaseoli | 2 |
| Methylomicrobium alcaliphilum 20Z | 2 |
| Aneurinibacillus thermoaerophilus L420-91 | 2 |
| Staphylococcus xylosus | 2 |
| Halobacterium salinarum NRC-1 | 2 |
| Thermoanaerobacterium thermosaccharolyticum | 2 |
| Pseudomonas aeruginosa PA14 | 2 |
| Mycobacterium tuberculosis CDC1551 | 2 |
| Dechloromonas aromatica | 2 |
| Streptomyces lincolnensis | 2 |
| Coix lacryma-jobi | 2 |
| Aphelandra squarrosa | 2 |
| Erwinia amylovora | 2 |
| Thermodesulfobacterium commune | 2 |
| Desulfovibrio sulfodismutans | 2 |
| Desulfovibrio multispirans | 2 |
| Haemophilus parainfluenzae | 2 |
| Streptomyces argillaceus | 2 |
| Leptospira borgpetersenii | 2 |
| Chlamydia muridarum | 2 |
| Chlamydia felis | 2 |
| Chlamydia caviae | 2 |
| Chlamydia abortus | 2 |
| Pyrobaculum aerophilum | 2 |
| Bacillus lentus | 2 |
| Penicillium paxilli ATCC 26601 | 2 |
| Penicillium paxilli | 2 |
| Cellulomonas biazotea | 2 |
| Candidatus Methylomirabilis oxyfera | 2 |
| Thioalkalivibrio thiocyanoxidans ARh 4 | 2 |
| Hormoscilla spongeliae SP12 | 2 |
| Ignicoccus hospitalis | 2 |
| Ustilago cynodontis | 2 |
| Moorea producens | 2 |
| Brassica rapa | 2 |
| Pseudoalteromonas luteoviolacea | 2 |
| Methanothermobacter marburgensis | 2 |
| Fischerella ambigua UTEX 1903 | 2 |
| Archaea | 2 |
| Escherichia coli | 2 |
| Enterobacter cloacae | 2 |
| Vibrio vulnificus | 2 |
| Vibrio alginolyticus NBRC 15630 = ATCC 17749 | 2 |
| Helianthus tuberosus | 2 |
| Strobilanthes cusia | 2 |
| Persicaria tinctoria | 2 |
| Burkholderia pyrrocinia | 2 |
| Fragaria x ananassa | 2 |
| Thermoanaerobacter brockii | 2 |
| Penicillium expansum | 2 |
| Campylobacter jejuni jejuni 81116 | 2 |
| Apium graveolens | 2 |
| Micromonospora carbonacea | 2 |
| Selenomonas ruminantium | 2 |
| Bifidobacterium bifidum | 2 |
| Bifidobacterium animalis lactis | 2 |
| Bifidobacterium adolescentis | 2 |
| Astragalus mongholicus | 2 |
| Trypanosoma brucei | 2 |
| Trichomonas vaginalis | 2 |
| Neocallimastix sp. LM-2 | 2 |
| Mycobacterium lacticola | 2 |
| Lepidium sativum | 2 |
| Rhodovulum sulfidophilum | 2 |
| Thiobacillus thioparus TK-m | 2 |
| Hyphomicrobium sp. S | 2 |
| Hyphomicrobium sp. EG | 2 |
| Cryptomeria japonica | 2 |
| Asparagus officinalis | 2 |
| Rhus typhina | 2 |
| Quercus robur | 2 |
| Micromonospora griseorubida | 2 |
| Clostridium cochlearium | 2 |
| Citrobacter amalonaticus | 2 |
| Shewanella sp. MR-7 | 2 |
| Shewanella sp. MR-4 | 2 |
| Gerbera hybrid cultivar | 2 |
| Sporobolus alterniflorus | 2 |
| Croton stellatopilosus | 2 |
| Botryococcus braunii | 2 |
| Pyrococcus woesei | 2 |
| Hyperthermus butylicus | 2 |
| Rubrobacter xylanophilus | 2 |
| Methanothermus fervidus | 2 |
| Megasphaera elsdenii | 2 |
| Sulfolobus acidocaldarius DSM 639 | 2 |
| Asclepias syriaca | 2 |
| Marinomonas sp. MWYL1 | 2 |
| Marinomonas sp. MED121 | 2 |
| Emiliania huxleyi | 2 |
| Oceanimonas doudoroffii | 2 |
| Peptoniphilus asaccharolyticus | 2 |
| Mytilus edulis | 2 |
| Arenicola marina | 2 |
| Thunbergia alata | 2 |
| Clostridium cylindrosporum | 2 |
| Gottschalkia acidurici | 2 |
| Physaria kathryn | 2 |
| Physaria lindheimeri | 2 |
| Physaria fendleri | 2 |
| Lachancea kluyveri | 2 |
| Brevibacillus agri | 2 |
| Salmonella enterica enterica serovar Typhimurium str. 14028S | 2 |
| Hapsidospora irregularis | 2 |
| Felis catus | 2 |
| Treponema pallidum | 2 |
| Halobacteria | 2 |
| Borreliella burgdorferi | 2 |
| Pseudomonas mevalonii | 2 |
| Astragalus bisulcatus | 2 |
| Astragalus | 2 |
| Calendula officinalis | 2 |
| Impatiens balsamina | 2 |
| Bordetella sp. 10d | 2 |
| Acidovorax sp. JS42 | 2 |
| Pseudomonas putida ORC | 2 |
| Lavandula angustifolia | 2 |
| Alcaligenes faecalis M3A | 2 |
| Pseudomonas stutzeri AN10 | 2 |
| Pseudomonas putida PpG7 | 2 |
| Rhodococcus sp. NCIMB 12038 | 2 |
| Burkholderia terrae KU-15 | 2 |
| Streptococcus pyogenes | 2 |
| Pseudomonas sp. KB 740 | 2 |
| Pseudomonas Sp. K172 | 2 |
| Saccharum officinarum | 2 |
| Archaeoglobus fulgidus 7324 | 2 |
| Panax notoginseng | 2 |
| Methylosphaera hansonii | 2 |
| Pseudomonas sp. HR199 | 2 |
| Bacillus subtilis spizizenii W23 | 2 |
| Nitrosospira multiformis | 2 |
| Nitrosopumilus maritimus SCM1 | 2 |
| Nitrosococcus oceani | 2 |
| Listeria monocytogenes | 2 |
| Pseudohyphozyma bogoriensis | 2 |
| Methanospirillum hungatei | 2 |
| Escherichia coli K-12 | 2 |
| Hydrogenobacter thermophilus | 2 |
| Photobacterium leiognathi leiognathi | 2 |
| Pyrobaculum neutrophilum | 2 |
| Aquifex pyrophilus | 2 |
| Gottschalkia purinilytica | 2 |
| Paracoccus denitrificans PD1222 | 2 |
| Hypericum calycinum | 2 |
| Methanosarcina barkeri Fusaro | 2 |
| Desulfitobacterium hafniense | 2 |
| Caulobacter vibrioides NA1000 | 2 |
| Streptomyces pilosus | 2 |
| Paenibacillus polymyxa | 2 |
| Simmondsia chinensis | 2 |
| Acinetobacter baumannii | 2 |
| Penicillium cyclopium | 2 |
| Zea mays mays | 2 |
| Oryza sativa Indica Group | 2 |
| Arabidopsis | 2 |
| Paenibacillus macerans | 2 |
| Mycobacterium tuberculosis variant africanum | 2 |
| Ustilago sphaerogena | 2 |
| Trichodesmium erythraeum | 2 |
| Prochlorococcus marinus | 2 |
| Sporomusa ovata | 2 |
| Streptomyces sp. WA46 | 2 |
| Serratia proteamaculans 568 | 1 |
| Mycobacterium tuberculosis complex | 1 |
| Flavobacterium johnsoniae UW101 | 1 |
| Flavobacterium johnsoniae | 1 |
| Capsicum baccatum | 1 |
| Pseudoalteromonas haloplanktis | 1 |
| Propionigenium modestum | 1 |
| Nostoc commune | 1 |
| Methanoplanus limicola | 1 |
| Methanococcales | 1 |
| Trichosporon moniliiforme WU-0401 | 1 |
| Cutaneotrichosporon moniliiforme | 1 |
| Acinetobacter haemolyticus | 1 |
| Lipomyces starkeyi | 1 |
| Cadra cautella | 1 |
| Spodoptera | 1 |
| Acheta domesticus | 1 |
| Periplaneta fuliginosa | 1 |
| Myzus cerasi | 1 |
| Chrysopa | 1 |
| Pseudomonas putida P35X | 1 |
| Saccharolobus solfataricus 98/2 | 1 |
| Ochromonas danica | 1 |
| Conium maculatum | 1 |
| Geobacillus kaustophilus | 1 |
| Vibrio anguillarum serovar O1 | 1 |
| Methanothrix soehngenii | 1 |
| Derris elliptica | 1 |
| Photobacterium sp. SKA34 | 1 |
| Photobacterium angustum S14 | 1 |
| Phaeobacter inhibens 2.10 | 1 |
| Methylorubrum populi BJ001 | 1 |
| Methylorubrum extorquens PA1 | 1 |
| Methylorubrum extorquens CM4 | 1 |
| Marinobacter hydrocarbonoclasticus | 1 |
| Marinobacter hydrocarbonoclasticus VT8 | 1 |
| Bacillus thuringiensis [] serovar konkukian str. 97-27 | 1 |
| Bacillus clausii KSM-K16 | 1 |
| Bacillus cereus G9241 | 1 |
| Bacillus anthracis Sterne | 1 |
| Aspergillus alliaceus | 1 |
| Cyanobium gracile PCC 6307 | 1 |
| Pelosinus fermentans DSM 17108 | 1 |
| Tephrosia vogelii | 1 |
| Pseudomonas syringae pv. syringae B728a | 1 |
| Mycobacterium gastri | 1 |
| Chaetomium globosum | 1 |
| Rheum tataricum | 1 |
| Hydrangea macrophylla | 1 |
| Arachis hypogaea | 1 |
| Cladosporium cladosporioides | 1 |
| Citrobacter intermedius | 1 |
| Shewanella putrefaciens 200 | 1 |
| Methylosphaera | 1 |
| Methylomicrobium japanense | 1 |
| Methylomonas sp. KSPIII | 1 |
| Vibrio anguillarum serovar O2 | 1 |
| Methylomonas methanica | 1 |
| Methylomonas fodinarum | 1 |
| Methylomonas aurantiaca | 1 |
| Methylomicrobium pelagicum | 1 |
| Methylomicrobium album | 1 |
| Methylomicrobium agile | 1 |
| Methylococcus thermophilus | 1 |
| Methylobacter marinus | 1 |
| Ephedra gerardiana | 1 |
| Toxicodendron vernicifluum | 1 |
| Rosa | 1 |
| Brassica nigra | 1 |
| Alcaligenes sp. strain L6 | 1 |
| Burkholderia cepacia 2CBS | 1 |
| Rosales | 1 |
| Nerine bowdenii | 1 |
| Narcissus aff. pseudonarcissus MK-2014 | 1 |
| Galanthus elwesii | 1 |
| Rhodophiala bifida bifida | 1 |
| Petiveria alliacea | 1 |
| Arthrobacter globiformis KZT1 | 1 |
| Arthrobacter sp. 4-CB1 | 1 |
| Pseudomonas sp. CBS3 | 1 |
| Arthrobacter sp. TM1 | 1 |
| Arthrobacter sp. SU | 1 |
| Umezakia natans | 1 |
| Raphidiopsis curvata | 1 |
| Oscillatoria sp. PCC 7926 | 1 |
| Cylindrospermopsis raciborskii AWT205 | 1 |
| Chrysosporum ovalisporum | 1 |
| Anabaena bergii | 1 |
| Lampranthus sociorum | 1 |
| Allium siculum | 1 |
| Penicillium palitans | 1 |
| Allium tuberosum | 1 |
| Escherichia coli J53-1 | 1 |
| Pseudomonas sp. K-62 | 1 |
| Bacillus sp. RC607 | 1 |
| Trichoderma reesei QM9414 | 1 |
| Thermosynechococcus elongatus | 1 |
| Allium ursinum | 1 |
| Allium schoenoprasum | 1 |
| Allium nutans | 1 |
| Allium fistulosum | 1 |
| Psychrobacter urativorans | 1 |
| Solanum melongena | 1 |
| Solanum aculeatissimum | 1 |
| Allium cepa aggregatum | 1 |
| Escherichia coli UTI89 | 1 |
| Passiflora edulis | 1 |
| Capsicum frutescens | 1 |
| Capsicum | 1 |
| Proteiniphilum acetatigenes | 1 |
| Prevotella paludivivens | 1 |
| Paraprevotella xylaniphila | 1 |
| Paraprevotella clara | 1 |
| Parabacteroides sp. CAG:409 | 1 |
| Parabacteroides goldsteinii | 1 |
| Bacteroides | 1 |
| Croton linearis | 1 |
| Plesiomonas sp. Yoshida 95 | 1 |
| Scytonema sp | 1 |
| Kocuria varians | 1 |
| Asanoa ferruginea | 1 |
| Psilotum nudum | 1 |
| Paenibacillus popilliae | 1 |
| Caryophyllaceae | 1 |
| Caryophyllales | 1 |
| Schizophyllum commune | 1 |
| Pleurotus ostreatus | 1 |
| Pichia fermentans | 1 |
| Lentinus sajor-caju | 1 |
| Grifola frondosa | 1 |
| Agaricus bisporus | 1 |
| Clostridium aminobutyricum | 1 |
| Mirabilis jalapa | 1 |
| Cleretum bellidiforme | 1 |
| Oleomonas sagaranensis | 1 |
| Pseudomonas putida PDC | 1 |
| Rhodococcus opacus 1CP | 1 |
| Methanococcus vannielii | 1 |
| Oxybasis rubra | 1 |
| Pseudomonas putida GJ31 | 1 |
| Pseudomonas fluorescens SK1 | 1 |
| Pseudomonas veronii 16-6A | 1 |
| Pseudomonas sp. MG61 | 1 |
| Thermoplasma volcanium | 1 |
| Rickettsia prowazekii Madrid E | 1 |
| Rickettsia prowazekii | 1 |
| Chlamydia trachomatis D/UW-3/CX | 1 |
| Chlamydia psittaci | 1 |
| Urochloa panicoides | 1 |
| Megathyrsus maximus | 1 |
| Sulfolobus islandicus | 1 |
| Methanoplanus | 1 |
| Eubacterium oxidoreducens G41 | 1 |
| Plesiomonas shigelloides | 1 |
| Burkholderia sp. NK8 | 1 |
| Ectothiorhodospira shaposhnikovii | 1 |
| Rhizophoraceae | 1 |
| Rhizophora apiculata | 1 |
| Rhizophora mangle | 1 |
| Bromus inermis | 1 |
| Panicum miliaceum | 1 |
| Amaranthus hypochondriacus | 1 |
| Amaranthus hybridus cruentus | 1 |
| Micrococcus percitreus | 1 |
| Bacillus sp. No. 230 | 1 |
| Brachybacterium conglomeratum | 1 |
| Dryopteris crassirhizoma | 1 |
| Penicillium digitatum ATCC 201167 | 1 |
| Methanothrix thermoacetophila | 1 |
| Methanothrix | 1 |
| Francisella tularensis tularensis SCHU S4 | 1 |
| Datura inoxia | 1 |
| Luffa aegyptiaca | 1 |
| Kalanchoe daigremontiana | 1 |
| Bacillus cereus ATCC 14579 | 1 |
| Methanococcoides sp. NaT1 | 1 |
| Gypsophila vaccaria | 1 |
| Methylomonas sp. 16a | 1 |
| Rhodococcus sp. C1 | 1 |
| Arthrobacter sp. TMP-1 | 1 |
| Ascochyta rabiei | 1 |
| Streptomyces scabiei 87.22 | 1 |
| Septoria lycopersici | 1 |
| Passalora fulva | 1 |
| Fusarium oxysporum sp. lycopersici | 1 |
| Clavibacter michiganensis michiganensis | 1 |
| Alternaria solani | 1 |
| Anthracobia melaloma | 1 |
| Peziza ostracoderma | 1 |
| Morchella vulgaris | 1 |
| Morchella costata | 1 |
| Gracilariopsis longissima | 1 |
| Gracilariopsis lemaneiformis | 1 |
| Macaca fuscata | 1 |
| Macaca mulatta | 1 |
| Thermococcus onnurineus | 1 |
| Lupinus polyphyllus | 1 |
| Pseudomonas putida strain PaWl | 1 |
| Amylomyces rouxii | 1 |
| Salmonella enterica O54 | 1 |
| Glycyrrhiza uralensis | 1 |
| Rhizobium etli | 1 |
| Pseudomonas taiwanensis | 1 |
| Pseudomonas straminea | 1 |
| Pigmentiphaga sp. DL-8 | 1 |
| Ribes nigrum | 1 |
| Oenothera biennis | 1 |
| Borago officinalis | 1 |
| Botryococcus braunii BOT22 | 1 |
| Magnolia | 1 |
| Bacillus sp. HYS-1 | 1 |
| Methyloceanibacter caenitepidi | 1 |
| Fluviicola taffensis | 1 |
| Cystobacter fuscus | 1 |
| Serratia plymuthica 4Rx13 | 1 |
| Paenibacillus sp. JJ-1b | 1 |
| Ralstonia sp. T6 | 1 |
| Labrenzia aggregata | 1 |
| Tetradesmus obliquus | 1 |
| Eucalyptus piperita | 1 |
| Atractylodes lancea | 1 |
| Hedychium | 1 |
| Guatteria friesiana | 1 |
| Guatteria blepharophylla | 1 |
| Guatteria hispida | 1 |
| Magnolia obovata | 1 |
| Proteus vulgaris OX2 | 1 |
| Proteus penneri 26 | 1 |
| Escherichia coli O98 | 1 |
| Bacteroides fragilis ATCC 23745 | 1 |
| Vibrio cholerae O37 | 1 |
| Variovorax sp. WDL1 | 1 |
| Variovorax sp. SRS16 | 1 |
| Variovorax sp. PBS-H4 | 1 |
| Cucurbita pepo | 1 |
| Cupressus | 1 |
| Paraburkholderia phenoliruptrix | 1 |
| Staphylococcus aureus aureus KCTC 1928 | 1 |
| Aspergillus clavatus | 1 |
| Pseudomonas aeruginosa O4 | 1 |
| Pseudomonas aeruginosa O12 | 1 |
| Pseudomonas aeruginosa O11 | 1 |
| Escherichia coli O26 | 1 |
| Ralstonia pickettii LD1 | 1 |
| Comamonas testosteroni JH5 | 1 |
| Rhodococcus opacus GM-14 | 1 |
| Cerastium arvense | 1 |
| Rhodopseudomonas palustris DSM 123 | 1 |
| Rhodopseudomonas palustris TIE-1 | 1 |
| Rhodopseudomonas palustris BisB5 | 1 |
| [Flavobacterium] lutescens | 1 |
| Methanococcus | 1 |
| Streptomyces rochei | 1 |
| Rhodococcus percolatus | 1 |
| Pseudomonas aeruginosa O5 | 1 |
| Pseudomonas moorei | 1 |
| Actinidia | 1 |
| Fusarium graminearum 70E1 | 1 |
| Fusarium graminearum GZ3639 | 1 |
| Synechococcus sp. PCC 7335 | 1 |
| Polaribacter irgensii 23-P | 1 |
| Ketogulonicigenium vulgare DSM 4025 | 1 |
| Hyoscyamus muticus | 1 |
| Acidianus infernus | 1 |
| Ammonifex degensii | 1 |
| Desulfomicrobium baculatum | 1 |
| Desulfurobacterium thermolithotrophum | 1 |
| Desulfuromonas acetexigens | 1 |
| Pyrodictium abyssi | 1 |
| Pyrodictium brockii | 1 |
| Sulfurospirillum deleyianum | 1 |
| Stetteria hydrogenophila | 1 |
| Stygiolobus azoricus | 1 |
| Sulfurospirillum arcachonense | 1 |
| Santalum austrocaledonicum | 1 |
| Santalum spicatum | 1 |
| Thermococcus onnurineus NA1 | 1 |
| Thermococcus gammatolerans | 1 |
| Pleurotus sapidus | 1 |
| Zea mays huehuetenangensis | 1 |
| Zea mays mexicana | 1 |
| Zea mays parviglumis | 1 |
| Syzygium aromaticum | 1 |
| Zea luxurians | 1 |
| Trichoderma harzianum | 1 |
| Fusarium Caucasicum | 1 |
| Arthrobacter pascens | 1 |
| Cylindrocarpon didymum | 1 |
| Fusarium anguioides | 1 |
| Thermoanaerobacterium saccharolyticum | 1 |
| Corynebacterium sp. SHS 0007 | 1 |
| Lactuca sativa | 1 |
| Helianthus annuus | 1 |
| Barnadesia spinosa | 1 |
| Streptomyces avermitilis MA-4680 = NBRC 14893 | 1 |
| Nitratiruptor sp. SB155-2 | 1 |
| Deinococcus radiodurans R1 | 1 |
| Acidothermus cellulolyticus 11B | 1 |
| Tyria jacobaeae | 1 |
| Apantesis nevadensis geneura | 1 |
| Estigmene acrea | 1 |
| Diacrisia sannio | 1 |
| Arctia caja | 1 |
| Carboxydothermus hydrogenoformans | 1 |
| Bacillus halodurans C-125 | 1 |
| Escherichia coli O113 | 1 |
| Sesamum alatum | 1 |
| Neurospora crassa 33933 | 1 |
| Neurospora crassa 15069 | 1 |
| Candida maltosa L4 | 1 |
| Slafractonia leguminicola | 1 |
| Fusarium graminearum 88-1 | 1 |
| Fusarium graminearum 79A1 | 1 |
| Clostridium bifermentans DPH-1 | 1 |
| Sulfurospirillum multivorans | 1 |
| Desulfitobacterium hafniense Y51 | 1 |
| Desulfitobacterium chlororespirans | 1 |
| Dehalococcoides mccartyi VS | 1 |
| Dehalobacter restrictus | 1 |
| Picea sitchensis | 1 |
| Sphingobium japonicum | 1 |
| Chlorophyta | 1 |
| Pyricularia oryzae | 1 |
| Microchaete diplosiphon | 1 |
| Leptolyngbya boryana | 1 |
| Forsythia koreana | 1 |
| Thalassiosira pseudonana CCMP1335 | 1 |
| Ostreococcus sp. lucimarinus | 1 |
| Cyanidioschyzon merolae strain 10D | 1 |
| Citrus x microcarpa | 1 |
| Thalictrum tuberosum | 1 |
| Coptis japonica dissecta | 1 |
| Tissierella creatinophila | 1 |
| Tissierella creatinini | 1 |
| Pseudomonas sp. Ps7 | 1 |
| Arthrobacter sp. TE1826 | 1 |
| Leishmania braziliensis | 1 |
| Leishmania donovani species complex | 1 |
| Leishmania mexicana species complex | 1 |
| Leishmania tarentolae | 1 |
| Leishmania tropica species complex | 1 |
| Alcaligenes sp. N-42 | 1 |
| Acidiphilium | 1 |
| Thioflavicoccus mobilis | 1 |
| Thiococcus pfennigii | 1 |
| Thioalkalicoccus limnaeus | 1 |
| Halorhodospira abdelmalekii | 1 |
| Linum | 1 |
| Chlorobium phaeovibrioides DSM 265 | 1 |
| Thuja plicata | 1 |
| Forsythia x intermedia | 1 |
| Pseudomonas putida T | 1 |
| Pseudomonas putida TG2T | 1 |
| Aeromonas jandaei | 1 |
| Vanrija humicola | 1 |
| Pseudomonas sp. NCIMB 10558 | 1 |
| Streptomyces odorifer | 1 |
| Streptomyces mediolani | 1 |
| Streptomyces lividans | 1 |
| Stemphylium loti | 1 |
| Microdochium sorghi | 1 |
| Aquilaria crassna | 1 |
| Gyrinops | 1 |
| Weissella paramesenteroides | 1 |
| Weissella confusa | 1 |
| Leuconostoc mesenteroides dextranicum | 1 |
| Lactobacillus sanfranciscensis | 1 |
| Rhizobium leguminosarum bv. viciae 3841 | 1 |
| Erythrobacter sp. SD-21 | 1 |
| Corynebacterium sp. B6 | 1 |
| Arthrobacter sp. 9759 | 1 |
| Pseudomonas cruciviae | 1 |
| Pandoraea pnomenusa | 1 |
| Burkholderia sp. JS150 | 1 |
| Alcaligenes sp. strain A175 | 1 |
| Bacillus pumilus WH4 | 1 |
| Leptothrix discophora strain SS-1 | 1 |
| Pedomicrobium sp. ACM 3067 | 1 |
| Bacillus sp. SG-1 | 1 |
| Bacillus sp. PL-12 | 1 |
| Pseudomonas nitroreducens J5-1 | 1 |
| Helicobacter pylori DMS 6709 | 1 |
| Neisseria gonorrhoeae | 1 |
| Helicobacter bizzozeronii CIII-1 | 1 |
| Alcaligenes sp. strain OBB65 | 1 |
| Bacillus cereus PF-11 | 1 |
| Aspergillus itaconicus | 1 |
| Plasmodium vivax | 1 |
| Plasmodium ovale | 1 |
| Plasmodium malariae | 1 |
| Vibrio cholerae 569B | 1 |
| Nepenthes rafflesiana | 1 |
| Nepenthes alata | 1 |
| Klebsiella pneumoniae pneumoniae MGH 78578 | 1 |
| Canis lupus familiaris | 1 |
| Acidovorax avenae | 1 |
| Phormidium lapideum | 1 |
| Haloferax sp. D1227 | 1 |
| Cydia pomonella | 1 |
| Caulobacter vibrioides | 1 |
| Salipiger bermudensis HTCC2601 | 1 |
| Populus tremuloides | 1 |
| Arthrobacter protophormiae R4 | 1 |
| endosymbiont of Riftia pachyptila | 1 |
| Aplysia californica | 1 |
| Novosphingobium aromaticivorans | 1 |
| Metazoa | 1 |
| Litchi chinensis | 1 |
| Arthrobacter synephrinum | 1 |
| Pseudomonas sp. KIE171 | 1 |
| Escherichia coli K-12 substr. MG1656 | 1 |
| Vicia faba Chukyo | 1 |
| Ips pini | 1 |
| Ips paraconfusus | 1 |
| Ips confusus | 1 |
| Schistocerca gregaria | 1 |
| Faxonius limosus | 1 |
| Penaeus japonicus | 1 |
| Carcinus maenas | 1 |
| Bemisia tabaci | 1 |
| Candida cloacae | 1 |
| Trifolium incarnatum | 1 |
| Rhyparobia maderae | 1 |
| Nauphoeta cinerea | 1 |
| Locusta migratoria | 1 |
| Diploptera punctata | 1 |
| Cyperus iria | 1 |
| Byrsotria fumigata | 1 |
| Blatta orientalis | 1 |
| Blaberus giganteus | 1 |
| Blaberus discoidalis | 1 |
| Prunella vulgaris | 1 |
| Melissa officinalis | 1 |
| Rhodococcus sp. N-771 | 1 |
| Bacillus sp. OxB-1 | 1 |
| Campylobacter jejuni jejuni 81-176 | 1 |
| Pseudomonas sp. SG-MS2 | 1 |
| Chamaecyparis obtusa | 1 |
| Aspergillus tubingensis | 1 |
| unidentified bacterium MM-P | 1 |
| unidentified bacterium DG-C1 | 1 |
| Alteromonas macleodii | 1 |
| Sterculia foetida | 1 |
| Moraxella sp | 1 |
| Comamonas sp. E6 | 1 |
| Phialophora <family Herpotrichiellaceae> | 1 |
| Komagataella phaffii GS115 | 1 |
| Astacus leptodactylus | 1 |
| Aspergillus | 1 |
| Burkholderia mallei | 1 |
| Cuphea wrightii | 1 |
| Salmonella enterica enterica serovar Adelaide | 1 |
| Pseudoalteromonas tetraodonis | 1 |
| Providencia alcalifaciens | 1 |
| Escherichia coli O111:NM | 1 |
| Salmonella enterica enterica serovar Paratyphi C | 1 |
| Salmonella enterica enterica serovar Paratyphi B | 1 |
| unidentified bacterium BIS-6 | 1 |
| Sphingomonas paucimobilis | 1 |
| Sphingobium sp. SYK-6 | 1 |
| Salmonella enterica enterica serovar Paratyphi A | 1 |
| Oligotropha carboxidovorans | 1 |
| Hydrogenophaga pseudoflava | 1 |
| Pseudomonas putida KL47 | 1 |
| Euonymus alatus | 1 |
| Pseudomonas sp. AP3 | 1 |
| Dimorphandra mollis | 1 |
| Campylobacter fetus | 1 |
| Pseudomonas sp. HH69 | 1 |
| Terrabacter sp. DPO360 | 1 |
| Burkholderia sp. JB1 | 1 |
| Tagetes patula | 1 |
| Tagetes erecta | 1 |
| Rudbeckia hirta | 1 |
| Rhodococcus N-774 | 1 |
| Auxenochlorella pyrenoidosa | 1 |
| Yersinia pseudotuberculosis (type O:2a) | 1 |
| Pseudomonas putida 1290 | 1 |
| Paraburkholderia phytofirmans PsJN | 1 |
| Pseudomonas putida O1 | 1 |
| Roccella tinctoria | 1 |
| Paracoccus thiophilus | 1 |
| Arthrobacter sp. KI72 | 1 |
| Verticillium sp. DSP | 1 |
| Streptomyces sp. AC7 | 1 |
| Stenotrophomonas sp. G1 | 1 |
| Paracoccus sp. TRP | 1 |
| Ochrobactrum sp. JAS2 | 1 |
| Cupriavidus sp. DT-1 | 1 |
| Pseudomonas sp. ML2 | 1 |
| Flaveria chlorifolia | 1 |
| Bacillus stearothermophilus BR388 | 1 |
| Pseudomonas sp. PL | 1 |
| Streptococcus pneumoniae R6 | 1 |
| Pseudomonas putida J | 1 |
| Pseudomonas putida KT2442 | 1 |
| Achromobacter | 1 |
| Corynebacterium sp. strain SY1 | 1 |
| Rhodococcus sp. IGTS8 | 1 |
| Rhodococcus erythropolis XP | 1 |
| Paenibacillus sp. A11-2 | 1 |
| Mycobacterium sp. G3 | 1 |
| Pseudomonas putida PL-W | 1 |
| Cephalocereus senilis | 1 |
| Pseudomonas putida UCC22 | 1 |
| Delftia tsuruhatensis AD9 | 1 |
| Delftia acidovorans 7N | 1 |
| Frateuria sp. ANA-18 | 1 |
| Delftia sp. AN3 | 1 |
| Acinetobacter sp. YAA | 1 |
| Acinetobacter lwoffii K24 | 1 |
| Pseudomonas putida II-B | 1 |
| Pseudomonas fluorescens I-C | 1 |
| Alteromonas sp. ATCC 43554 | 1 |
| Pseudoalteromonas sp. CL19 | 1 |
| Tecoma stans | 1 |
| Jasminum grandiflorum | 1 |
| Spartina | 1 |
| Rhodopirellula baltica | 1 |
| Pseudoalteromonas sp. LL1 | 1 |
| Pseudoalteromonas sp. AJ5 | 1 |
| Coraliomargarita akajimensis DSM 45221 | 1 |
| Nonlabens ulvanivorans | 1 |
| Bacillus sp. GL1 | 1 |
| Burkholderia sp. AK-5 | 1 |
| Kribbella flavida | 1 |
| Tetrahymena thermophila | 1 |
| Penicillium janthinellum | 1 |
| Brassica oleracea italica | 1 |
| Sphingomonas sp. A1 | 1 |
| Neptunia | 1 |
| Gram-negative bacterium ASV2 | 1 |
| Ruminococcus albus NE1 | 1 |
| Ruminococcus albus 7 = DSM 20455 | 1 |
| Bacillus subtilis natto | 1 |
| Vibrio sp. JT0107 | 1 |
| Pseudomonas putida JD1 | 1 |
| Pseudomonas fluorescens ACB | 1 |
| Plesiomonas sp. M6 | 1 |
| Sauromatum venosum | 1 |
| Aneurinibacillus thermoaerophilus | 1 |
| Pseudomonas fluorescens ST | 1 |
| Pseudomonas sp. VLB120 | 1 |
| Variovorax paradoxus B4 | 1 |
| Sphingomonas sp. SS3 | 1 |
| Sphingomonas sp. PH-07 | 1 |
| Erwinia sp | 1 |
| Cupriavidus sp. WS | 1 |
| Pseudomonas LD2 | 1 |
| Sphingomonas sp. XLDN2-5 | 1 |
| Sphingomonas sp. CB3 | 1 |
| Pseudomonas rhodesiae | 1 |
| Neptuniibacter sp. CAR-SF | 1 |
| Penicillium olsonii | 1 |
| Aspergillus flavus NRRL3357 | 1 |
| Trichinella spiralis | 1 |
| Syngamus trachea | 1 |
| Stephanurus dentatus | 1 |
| Moniezia expansa | 1 |
| Haemonchus contortus | 1 |
| Dictyocaulus viviparus | 1 |
| Azoarcus sp. EB1 | 1 |
| Azoarcus sp. PbN1 | 1 |
| Lactococcus garvieae 20-92 | 1 |
| Asaccharobacter celatus AHU1763 | 1 |
| Slackia sp. NATTS | 1 |
| Slackia isoflavoniconvertens | 1 |
| human intestinal bacterium SNU-Julong732 | 1 |
| Adlercreutzia equolifaciens | 1 |
| Lymnaea stagnalis | 1 |
| Robinia pseudoacacia | 1 |
| Pseudomonas cepacia 122 | 1 |
| Pseudomonas sp GU5 | 1 |
| Xenopus laevis | 1 |
| Anolis carolinensis | 1 |
| Sceloporus jarrovii | 1 |
| Carassius auratus | 1 |
| Brevundimonas diminuta | 1 |
| Comamonas testosteroni 63 | 1 |
| Ochrobactrum tritici | 1 |
| Herminiimonas arsenicoxydans | 1 |
| arsenite-oxidizing bacterium NT-14 | 1 |
| Lathyrus odoratus | 1 |
| Fagus crenata | 1 |
| Albizia julibrissin | 1 |
| Silene latifolia alba | 1 |
| Nitrospira moscoviensis | 1 |
| Nitrospina | 1 |
| Nitrococcus | 1 |
| Nitrobacter winogradskyi | 1 |
| Nitrobacter vulgaris | 1 |
| Nitrobacter hamburgensis | 1 |
| Nitrobacter alkalicus | 1 |
| Nitrobacter | 1 |
| Thermococcus stetteri | 1 |
| Thermococcus celer | 1 |
| Sulfuricella denitrificans | 1 |
| Ruegeria pomeroyi | 1 |
| Magnetospirillum | 1 |
| Magnetococcus | 1 |
| Chlorobium | 1 |
| Streptomyces nodosus asukaensis | 1 |
| Citrullus lanatus vulgaris | 1 |
| Thiomonas delicata | 1 |
| Sulfuriferula plumbiphila | 1 |
| Sulfobacillus thermosulfidooxidans | 1 |
| Sulfitobacter pontiacus | 1 |
| Sulfitobacter | 1 |
| Beggiatoa | 1 |
| Pseudoalteromonas haloplanktis TAC125 | 1 |
| Pseudanabaena limnetica | 1 |
| Scutellaria viscidula | 1 |
| Metallosphaera cuprina | 1 |
| Todarodes pacificus | 1 |
| Onchidium | 1 |
| Doryteuthis pealeii | 1 |
| Cestrum elegans | 1 |
| Lathyrus tingitanus | 1 |
| Foeniculum vulgare dulce | 1 |
| Vaccinium vitis-idaea | 1 |
| Salvia hispanica | 1 |
| Portulaca oleracea | 1 |
| Hippophae rhamnoides | 1 |
| Acanthamoeba sp | 1 |
| Aureispira marina | 1 |
| Spirodela polyrhiza | 1 |
| Ochrobactrum anthropi GPK 3 | 1 |
| Ochrobactrum sp. G-1 | 1 |
| Ensifer adhaerens | 1 |
| Escherichia coli Crookes | 1 |
| Haliangium ochraceum | 1 |
| Chondromyces apiculatus | 1 |
| Natrialba magadii | 1 |
| Pseudomonas amygdali pv. sesami | 1 |
| Pseudomonas savastanoi pv. glycinea | 1 |
| Streptomyces sp. K30 | 1 |
| Gordonia westfalica | 1 |
| Gordonia polyisoprenivorans | 1 |
| Escherichia coli B SPAO | 1 |
| Cryptococcus albidus IFO 0939 | 1 |
| Chromatium | 1 |
| Citrus junos | 1 |
| Thalictrum bulgaricum | 1 |
| Neonectria obtusispora | 1 |
| Phaeosphaeria sp. L487 | 1 |
| Rhodococcus opacus HL PM-1 | 1 |
| Nocardioides sp. CB 22-2 | 1 |
| Nocardioides simplex FJ2-1A | 1 |
| Corydalis cava | 1 |
| Methanobrevibacter ruminantium | 1 |
| Nicotiana plumbaginifolia | 1 |
| Citrobacter sp. S-77 | 1 |
| Mycobacterium sp. HL 4-NT-1 | 1 |
| Berberis | 1 |
| Thalictrum flavum glaucum | 1 |
| Cymbopogon martinii | 1 |
| Cymbopogon flexuosus | 1 |
| Leptospira biflexa serovar Patoc | 1 |
| Geobacter sulfurreducens | 1 |
| Bacillus fastidiosus | 1 |
| Thalassiosira pseudonana | 1 |
| Phytophthora infestans | 1 |
| Aureococcus anophagefferens | 1 |
| Rhizobium sp. MTP-10005 | 1 |
| Picea glauca | 1 |
| Peganum harmala | 1 |
| Methanococcoides burtonii | 1 |
| Rhodococcus globerulus | 1 |
| Bradyrhizobium sp. JS329 | 1 |
| Berberis beaniana | 1 |
| Corydalis saxicola | 1 |
| Rhodococcus sp. TMP1 | 1 |
| Ochrobactrum anthropi | 1 |
| Pseudomonas aeruginosa TAU-5 | 1 |
| Nocardioides sp. JS1661 | 1 |
| Coptis teeta | 1 |
| Chelidonium majus | 1 |
| Corynebacterium nephridii | 1 |
| Actinomyces israelii | 1 |
| Actinomyces viscosus | 1 |
| Pyrus pyrifolia | 1 |
| Gluconobacter | 1 |
| Escherichia coli BL21(DE3) | 1 |
| Achromobacter superficialis | 1 |
| Shewanella algae | 1 |
| Halobacterium sp. NCIMB 763 | 1 |
| Ectothiorhodospira haloalkaliphila | 1 |
| Brevibacterium iodinum | 1 |
| Brevibacterium sterolicum | 1 |
| Corynebacterium kutscheri | 1 |
| Corynebacterium pseudotuberculosis | 1 |
| Corynebacterium renale | 1 |
| Corynebacterium ulcerans | 1 |
| Corynebacterium xerosis | 1 |
| Rhodococcus fascians | 1 |
| Rhodococcus corynebacterioides | 1 |
| Nocardia asteroides | 1 |
| Nocardia brasiliensis | 1 |
| Nocardia farcinica | 1 |
| Nocardia transvalensis | 1 |
| Nocardia vaccinii | 1 |
| Rhodococcus rhodnii | 1 |
| Streptomyces gardneri | 1 |
| Sphingobium japonicum BiD32 | 1 |
| Legionella pneumophila pneumophila Philadelphia 1 | 1 |
| Myxozyma melibiosi | 1 |
| Azotobacter vinelandii NBRC 102612 | 1 |
| Scheffersomyces stipitis CBS 6054 | 1 |
| Debaryomyces hansenii hansenii CBS767 | 1 |
| Burkholderia cenocepacia | 1 |
| Epichloe hybrida | 1 |
| Claviceps fusiformis | 1 |
| Balansia obtecta | 1 |
| Providencia stuartii | 1 |
| Thiothrix ramosa | 1 |
| Thioalkalivibrio paradoxus | 1 |
| Lygodium circinatum | 1 |
| Acidianus sp. A1-3 | 1 |
| Sphingomonas sp. SKA58 | 1 |
| Toxoplasma gondii RH | 1 |
| Toxoplasma gondii ME49 | 1 |
| Toxoplasma gondii | 1 |
| Eimeria tenella | 1 |
| Eimeria | 1 |
| Neisseria meningitidis serogroup B | 1 |
| Escherichia coli K1 | 1 |
| Thermoproteus | 1 |
| Thermomicrobium | 1 |
| Thermobaculum | 1 |
| Sphaerobacter | 1 |
| Pyrobaculum | 1 |
| Natronomonas | 1 |
| Natrialba | 1 |
| Ignicoccus | 1 |
| Haloterrigena | 1 |
| Halomicrobium | 1 |
| Haloferax | 1 |
| Haloarcula | 1 |
| Halalkalicoccus | 1 |
| Staphylococcus sciuri | 1 |
| Streptococcus oralis | 1 |
| Penicilliopsis zonata | 1 |
| Aspergillus carneus | 1 |
| Chlamydomonas | 1 |
| Xylella fastidiosa | 1 |
| Tannerella forsythia | 1 |
| Prototheca wickerhamii | 1 |
| Pseudomonas putida ZWL73 | 1 |
| Synechococcus nidulans | 1 |
| Chlorogloeopsis fritschii | 1 |
| Alcaligenes viscolactis S-2 | 1 |
| Arthrobacter agilis | 1 |
| Paenarthrobacter aurescens | 1 |
| Pseudarthrobacter oxydans | 1 |
| Arthrobacter ramosus | 1 |
| Cellulosimicrobium cellulans | 1 |
| Cellulomonas fimi | 1 |
| Cellulomonas flavigena | 1 |
| Paenarthrobacter ilicis | 1 |
| Oerskovia turbata | 1 |
| Corynebacterium matruchotii | 1 |
| Corynebacterium ammoniagenes | 1 |
| Corynebacterium stationis | 1 |
| Corynebacterium variabile | 1 |
| Corynebacterium bovis | 1 |
| Corynebacterium callunae | 1 |
| Gordonia amarae | 1 |
| Actinomadura madurae | 1 |
| Actinomadura pelletieri | 1 |
| Saccharopolyspora rectivirgula | 1 |
| Streptomyces spiralis | 1 |
| Promicromonospora citrea | 1 |
| Streptomyces platensis | 1 |
| Streptomyces somaliensis | 1 |
| Rhodobacter capsulatus SB 1003 | 1 |
| Mucor circinelloides | 1 |
| Ruminococcus gnavus N53 | 1 |
| Clostridium sardiniense | 1 |
| Yersinia ruckeri | 1 |
| Photobacterium halotolerans | 1 |
| Agrobacterium radiobacter S2 | 1 |
| Hydrogenophaga intermedia | 1 |
| Rhodococcus <high GC Gram+> | 1 |
| Micromonospora | 1 |
| Actinomadura | 1 |
| Nocardiopsis | 1 |
| Comamonas testosteroni KF-1 | 1 |
| Nicotiana benthamiana | 1 |
| Asterias rubens | 1 |
| Marichromatium gracile | 1 |
| Escherichia coli O108 | 1 |
| Streptomyces verticillus | 1 |
| Streptomyces caespitosus | 1 |
| Pseudomonas sp. TPU 7192 | 1 |
| Sandaracinus amylolyticus | 1 |
| Methylosarcina lacus | 1 |
| Methylobacter luteus | 1 |
| Eudoraea adriatica | 1 |
| Nocardia uniformis tsuyamanensis | 1 |
| Actinosynnema mirum | 1 |
| Digitalis grandiflora | 1 |
| Anaerovibrio lipolyticus | 1 |
| Kluyveromyces lactis | 1 |
| Streptomyces roseogriseus | 1 |
| Streptomyces exfoliatus | 1 |
| Streptomyces arenae | 1 |
| Pseudomonas sp. MA-1 | 1 |
| Ochrobactrum | 1 |
| Kitasatospora griseola MF730-N6 MF730-N6 | 1 |
| [Bacillus] caldovelox | 1 |
| Arthrobacter aurescens TW17 | 1 |
| Streptococcus equinus | 1 |
| Lactobacillus salivarius | 1 |
| Malus domestica Holsteiner Cox | 1 |
| Malus domestica Golden Delicious | 1 |
| Streptococcus pneumoniae 23F | 1 |
| Vogesella indigofera | 1 |
| Enterococcus gallinarum | 1 |
| Streptomyces violaceochromogenes | 1 |
| Leishmania donovani | 1 |
| Arthrobacter sp. KUJ8602 | 1 |
| Enterococcus raffinosus | 1 |
| Arabidopsis thaliana Ws | 1 |
| Tanacetum vulgare | 1 |
| Tanacetum balsamita | 1 |
| Streptomyces hygroscopicus 10-22 | 1 |
| Streptomyces hygroscopicus limoneus | 1 |
| Streptomyces hygroscopicus jinggangensis 5008 | 1 |
| Streptomyces hygroscopicus jinggangensis | 1 |
| Ustilago syntherismae | 1 |
| Ustilago nuda | 1 |
| Ustilago hordei | 1 |
| Tilletia caries | 1 |
| Sphinx ligustri | 1 |
| Rana catesbeiana | 1 |
| Myxotrichum stipitatum | 1 |
| Myxotrichum chartarum | 1 |
| Monascus ruber | 1 |
| Monascus purpureus | 1 |
| Monascus pilosus | 1 |
| Keratinophyton terreum | 1 |
| Keratinophyton saturnoideum | 1 |
| Keratinophyton hispanicum | 1 |
| Gymnoascus demonbreunii | 1 |
| Graphiola phoenicis | 1 |
| Coccinella | 1 |
| Chrysosporium keratinophilum | 1 |
| Aspergillus cejpii | 1 |
| Aphanoascus verrucosus | 1 |
| Amauroascus aureus | 1 |
| Agrius cingulata | 1 |
| Cinchona pubescens | 1 |
| Cinchona pitayensis | 1 |
| Cinchona officinalis | 1 |
| Cinchona mutisii | 1 |
| Cinchona macrocalyx | 1 |
| Cinchona calisaya | 1 |
| Cinchona | 1 |
| Salvia stenophylla | 1 |
| Streptomyces sp. SNA15896 | 1 |
| Agrobacterium rhizogenes | 1 |
| Prochlorococcus phage P-SSM4 | 1 |
| Prochlorococcus phage P-SSM2 | 1 |
| Micromonospora echinospora | 1 |
| Synechococcus sp. WH 8102 | 1 |
| Synechococcus sp. RS9916 | 1 |
| Mentha x gracilis | 1 |
| Perilla citriodora | 1 |
| Cinnamomum tenuipile | 1 |
| Gluconobacter oxydans UV10 | 1 |
| Gluconobacter oxydans IFO 3255 | 1 |
| Ketogulonicigenium vulgare | 1 |
| Streptomyces wedmorensis | 1 |
| [Candida] vartiovaarae | 1 |
| [Candida] succiphila | 1 |
| [Candida] stellimalicola | 1 |
| [Candida] sonorensis | 1 |
| [Candida] silvicultrix | 1 |
| [Candida] rugopelliculosa | 1 |
| [Candida] quercuum | 1 |
| [Candida] pseudolambica | 1 |
| [Candida] pini | 1 |
| [Candida] ovalis | 1 |
| [Candida] odintsovae | 1 |
| [Candida] norvegica | 1 |
| [Candida] nitratophila | 1 |
| [Candida] nemodendra | 1 |
| [Candida] nanaspora | 1 |
| [Candida] montana | 1 |
| [Candida] methanosorbosa | 1 |
| [Candida] maritima | 1 |
| [Candida] maris | 1 |
| [Candida] inconspicua | 1 |
| [Candida] ethanolica | 1 |
| [Candida] dendrica | 1 |
| [Candida] berthetii | 1 |
| Wickerhamomyces mucosus | 1 |
| Wickerhamomyces anomalus | 1 |
| Starmera caribaea | 1 |
| Starmera amethionina | 1 |
| Saturnispora silvae | 1 |
| Saturnispora diversa | 1 |
| Pichia norvegensis | 1 |
| Phaffomyces opuntiae | 1 |
| Ogataea salicorniae | 1 |
| Ogataea pignaliae | 1 |
| Nakazawaea wickerhamii | 1 |
| Nakazawaea peltata | 1 |
| Kregervanrija fluxuum | 1 |
| [Candida] sorboxylosa | 1 |
| Candida solani | 1 |
| Candida freyschussii | 1 |
| Candida cariosilignicola | 1 |
| Barnettozyma pratensis | 1 |
| Barnettozyma californica | 1 |
| Ambrosiozyma llanquihuensis | 1 |
| Armillaria mellea | 1 |
| Armillaria gallica | 1 |
| Schizonepeta tenuifolia | 1 |
| Carum carvi | 1 |
| Jacquinia angustifolia | 1 |
| Plectranthus barbatus | 1 |
| Starmerella stellata | 1 |
| [Candida] rhagii | 1 |
| Starmerella lactis-condensi | 1 |
| [Candida] gotoi | 1 |
| Wickerhamiella galacta | 1 |
| Clavispora fructus | 1 |
| [Candida] fennica | 1 |
| Nakazawaea populi | 1 |
| Nakazawaea ishiwadae | 1 |
| Nakazawaea holstii | 1 |
| Nakazawaea ernobii | 1 |
| Nakazawaea anatomiae | 1 |
| Kuraishia capsulata | 1 |
| Hyphopichia homilentoma | 1 |
| Hyphopichia burtonii | 1 |
| Clavispora lusitaniae | 1 |
| Citeromyces matritensis | 1 |
| Candida silvanorum | 1 |
| Candida sequanensis | 1 |
| Candida karawaiewii | 1 |
| [Candida] incommunis | 1 |
| Candida entomophila | 1 |
| Pseudonocardia autotrophica | 1 |
| Ammi majus | 1 |
| Algoriphagus sp. KK10202C | 1 |
| chromatium vinosum strain D | 1 |
| Desulfovibrio fructosivorans | 1 |
| Nocardiopsis sp. K-290 | 1 |
| Nonomuraea longicatena | 1 |
| Methanothermobacter thermautotrophicus Winter | 1 |
| Azotobacter chroococcum | 1 |
| Acinetobacter lwoffii | 1 |
| Ancylobacter aquaticus | 1 |
| Hydrogenibacillus schlegelii | 1 |
| Herbaspirillum autotrophicum | 1 |
| Hydrogenophaga flava | 1 |
| Hydrogenophaga palleronii | 1 |
| Hydrogenophilus thermoluteolus | 1 |
| Mycobacterium gordonae | 1 |
| Pseudomonas hydrogenovora | 1 |
| Ancylobacter vacuolatus | 1 |
| Xanthobacter flavus | 1 |
| Polaribacter filamentus | 1 |
| Gemmata sp. Wa1-1 | 1 |
| Actinobacteria <actinobacteria> | 1 |
| Streptomyces sp. K01-0509 | 1 |
| Brevundimonas aurantiaca | 1 |
| Nannizzia racemosa | 1 |
| Xanthothecium peruvianum | 1 |
| Uncinocarpus reesii | 1 |
| Trichophyton simii | 1 |
| Trichophyton mentagrophytes | 1 |
| Thermoascus crustaceus | 1 |
| Thermoascus aurantiacus | 1 |
| Thermoascus | 1 |
| Shanorella spirotricha | 1 |
| Sander vitreus | 1 |
| Rattus | 1 |
| Pucciniastrum boehmeriae | 1 |
| Puccinia coronata avenae f. sp. avenae | 1 |
| Pieris rapae | 1 |
| Penicillium malachiteum | 1 |
| Pectinotrichum llanense | 1 |
| Paraphyton cookei | 1 |
| Onygena equina | 1 |
| Onygena corvina | 1 |
| Nannizzia persicolor | 1 |
| Nannizzia nana | 1 |
| Nannizzia incurvata | 1 |
| Nannizzia gypsea | 1 |
| Nannizzia fulva | 1 |
| Microsporum canis | 1 |
| Melampsora epitea | 1 |
| Lophophyton gallinae | 1 |
| Ctenomyces serratus | 1 |
| Cladophora | 1 |
| Ascosphaera proliperda | 1 |
| Ascosphaera major | 1 |
| Ascosphaera atra | 1 |
| Ascosphaera asterophora | 1 |
| Ascosphaera apis | 1 |
| Ascosphaera | 1 |
| Arthrodermataceae | 1 |
| Arthroderma quadrifidum | 1 |
| Arthroderma curreyi | 1 |
| Arthroderma borellii | 1 |
| Arachnotheca glomerata | 1 |
| Arachnomyces minimus | 1 |
| Apinisia graminicola | 1 |
| Camellia taliensis | 1 |
| Desulfocapsa thiozymogenes | 1 |
| Desulfocapsa | 1 |
| Desulfobulbus | 1 |
| Streptomyces glaucescens | 1 |
| Adonis aestivalis | 1 |
| Synechococcus sp. WH 8020 | 1 |
| Theobroma cacao | 1 |
| Mycoplasma genitalium | 1 |
| Streptomyces ribosidificus | 1 |
| Sphingomonas lacus | 1 |
| Sphingomonas astaxanthinifaciens | 1 |
| Picrophilus torridus | 1 |
| Acidianus tengchongensis | 1 |
| Acidianus brierleyi | 1 |
| Acidianus | 1 |
| Bacillus brevis Nagano | 1 |
| Aneurinibacillus migulanus | 1 |
| Thiocapsa marina | 1 |
| Marichromatium purpuratum | 1 |
| Candidatus Thiodictyon syntrophicum Cad16 | 1 |
| Methanocaldococcus fervens | 1 |
| Methanobrevibacter | 1 |
| Streptomyces virginiae | 1 |
| Lysobacter dokdonensis | 1 |
| Kocuria rhizophila | 1 |
| Arenimonas malthae | 1 |
| Saccharomyces chevalieri | 1 |
| Jeotgalicoccus sp. ATCC 8456 | 1 |
| Sphingomonas elodea | 1 |
| Sandarakinorhabdus limnophila | 1 |
| Porphyrobacter tepidarius | 1 |
| Erythrobacter longus | 1 |
| Cucurbita pepo Early Prolific Straightneck | 1 |
| Aquilegia vulgaris | 1 |
| Streptosporangium sibiricum | 1 |
| Methanobacterium ivanovii | 1 |
| Rhodococcus sp. AD45 | 1 |
| Pseudomonas sp. Y2 | 1 |
| Streptomyces rubellomurinus | 1 |
| Mycobacterium sp. ELW1 | 1 |
| Nicotiana rustica | 1 |
| Streptomyces galbus | 1 |
| Streptomyces ornatus | 1 |
| Mycolicibacterium rhodesiae JS60 | 1 |
| Staphylothermus marinus | 1 |
| Desulfurococcus mucosus | 1 |
| Streptomyces leeuwenhoekii | 1 |
| Bacillus halodurans | 1 |
| Kitasatospora phosalacinea | 1 |
| Mycobacterium vaccae JOB5 | 1 |
| Mycobacterium austroafricanum IFP 2015 | 1 |
| Mycobacterium austroafricanum IFP 2012 | 1 |
| Hydrogenophaga flava ENV735 | 1 |
| Methylibium petroleiphilum PM1 | 1 |
| Aquincola tertiaricarbonis | 1 |
| Prevotella denticola | 1 |
| Prevotella dentalis | 1 |
| Bacteroides salanitronis | 1 |
| Bacteroides helcogenes | 1 |
| Alistipes finegoldii | 1 |
| Streptomyces sp. C5 | 1 |
| Pelobacter venetianus | 1 |
| Pelobacter carbinolicus DSM 2380 | 1 |
| Clostridium magnum | 1 |
| Fusarium incarnatum | 1 |
| Streptomyces albidoflavus | 1 |
| Narcissus pseudonarcissus | 1 |
| Carica papaya | 1 |
| Streptomyces thioluteus | 1 |
| Streptomyces sp. MM23 | 1 |
| Haematococcus lacustris | 1 |
| Agrobacterium aurantiacum | 1 |
| Vibrio sp. K-7 | 1 |
| Bacteroides sp. DeMoss 69 | 1 |
| Symbiobacterium thermophilum | 1 |
| Paenibacillus alvei | 1 |
| Fusobacterium varium | 1 |
| Botryococcus braunii BOT88-2 | 1 |
| Lilium lancifolium | 1 |
| Aesculus | 1 |
| Serratia marcescens H30 | 1 |
| Pseudomonas fluorescens 2-79 | 1 |
| bacterium | 1 |
| Dalbergia nigrescens | 1 |
| Botryococcus braunii race L | 1 |
| Streptomyces sp. TP-A0274 | 1 |
| Streptomyces longisporoflavus | 1 |
| Streptomyces actuosus | 1 |
| Lentzea albida | 1 |
| Laminaria digitata | 1 |
| Fucus gardneri | 1 |
| Streptomyces lysosuperificus | 1 |
| Streptomyces chartreusis | 1 |
| Xanthobacter agilis | 1 |
| Psychromonas ingrahamii | 1 |
| Dickeya dadantii | 1 |
| Sporomusa silvacetica | 1 |
| Propionispora vibrioides | 1 |
| Paenibacillus borealis | 1 |
| Desulfovibrio termitidis | 1 |
| Desulfovibrio piger | 1 |
| Desulfovibrio fairfieldensis | 1 |
| Desulfovibrio desulfuricans DSM 642 | 1 |
| Desulfitobacterium dehalogenans | 1 |
| Bilophila wadsworthia | 1 |
| Bifidobacterium tissieri | 1 |
| Bacteroidales bacterium Barb6XT | 1 |
| Bacillus subtilis spizizenii ATCC 6633 | 1 |
| Streptomyces lasaliensis NRRL3382R | 1 |
| Streptomyces ambofaciens ATCC 23877 | 1 |
| Pseudanabaena limnetica Castaic Lake | 1 |
| Lactobacillaceae | 1 |
| Neptuniibacter caesariensis | 1 |
| Streptomyces hygroscopicus ATCC 21705 | 1 |
| Streptomyces viridochromogenes DSM 40736 | 1 |
| Streptomyces viridochromogenes | 1 |
| Chondrus crispus | 1 |
| Lilium longiflorum | 1 |
| Hordeum vulgare vulgare | 1 |
| Dalbergia cochinchinensis | 1 |
| Paenibacillus polymyxa E681 | 1 |
| Prunus mume | 1 |
| Prunus dulcis | 1 |
| Amycolatopsis mediterranei U32 | 1 |
| Trifolium repens | 1 |
| Streptomyces sp. CS | 1 |
| Streptomyces griseosporeus | 1 |
| Streptomyces diastatochromogenes | 1 |
| Xanthomonas oryzae pv. oryzae | 1 |
| Prunus serotina | 1 |
| Lactobacillus paraplantarum | 1 |
| Vicia sativa nigra | 1 |
| Phlebodium aureum | 1 |
| Davallia trichomanoides | 1 |
| Actinoplanes utahensis | 1 |
| Pteris vittata | 1 |
| Streptomyces galilaeus | 1 |
| Vibrio sp. XY-214 | 1 |
| Vibrio sp. AX-4 | 1 |
| Alcaligenes sp. XY-234 | 1 |
| Streptomyces alboniger | 1 |
| Coniochaeta ligniaria | 1 |
| Streptomyces orinoci | 1 |
| Ipomoea purpurea | 1 |
| Streptomyces echinatus | 1 |
| Bacillus sp. 8 | 1 |
| Chrysosporium lucknowense | 1 |
| Ajuga reptans | 1 |
| Streptomyces lavendulae lavendulae | 1 |
| Streptomyces garyphalus | 1 |
| Pseudomonas sp. P.J. 874 | 1 |
| Mentha aquatica citrata | 1 |
| Phleum pratense | 1 |
| Streptomyces luridus | 1 |
| Vitis labrusca | 1 |
| Senecio | 1 |
| Freesia hybrid cultivar | 1 |
| Rhizobium tropici | 1 |
| Azorhizobium caulinodans | 1 |
| Arthrobacter sp. Q36 | 1 |
| Geotrichum sp. M128 | 1 |
| Aspergillus fischeri NRRL 181 | 1 |
| Cupriavidus necator N-1 | 1 |
| Clostridioides difficile ATCC 9689 = DSM 1296 | 1 |
| Pseudomonas fluorescens DSM 8341 | 1 |
| Moraxella sp. B | 1 |
| Burkholderia sp. FA1 | 1 |
| Pseudomonas fluorescens NCIMB 10586 | 1 |
| Serratia liquefaciens | 1 |
| Blautia hydrogenotrophica DSM 10507 | 1 |
| Actinobacillus succinogenes 130Z | 1 |
| Streptomyces morookaense | 1 |
| Streptomyces griseochromogenes | 1 |
| Pericallis cruenta | 1 |
| Chrysanthemum x morifolium | 1 |
| Arthrobacter | 1 |
| Paracoccus denitrificans NCIMB 8944 | 1 |
| Populus | 1 |
| Pseudomonas syringae pv. syringae | 1 |
| Phormia regina | 1 |
| Helicoverpa armigera | 1 |
| Shewanella sp. GA-22 | 1 |
| Shewanella pneumatophori | 1 |
| Shewanella hanedai | 1 |
| Schizochytrium sp. ATCC 20888 | 1 |
| Psychromonas ingrahamii 37 | 1 |
| Psychroflexus torquis ATCC 700755 | 1 |
| Photobacterium profundum SS9 | 1 |
| Colwellia psychrerythraea 34H | 1 |
| Photorhabdus laumondii laumondii TTO1 | 1 |
| Streptomyces davaonensis | 1 |
| Streptomyces cinnabarinus | 1 |
| Streptomyces kanamyceticus | 1 |
| Streptoalloteichus tenebrarius | 1 |
| Pimelobacter sp. R48 | 1 |
| Pseudomonas putida H262 | 1 |
| Thermus caldophilus | 1 |
| Vibrionaceae | 1 |
| Streptomyces lividus | 1 |
| Pseudomonas putida SQ1 | 1 |
| Lentzea aerocolonigenes | 1 |
| Prochlorococcus marinus MIT 9211 | 1 |
| Francisella tularensis novicida U112 | 1 |
| Streptococcus agalactiae NEM316 | 1 |
| Diospyros kaki | 1 |
| Candidatus Pelagibacter ubique | 1 |
| Phycomyces blakesleeanus | 1 |
| Vaccinium myrtillus | 1 |
| Rhizobium leguminosarum bv. phaseoli | 1 |
| Gelatoporia subvermispora | 1 |
| Tapinella panuoides | 1 |
| Suillus grevillei | 1 |
| Pseudomonas putida B2 | 1 |
| Mycobacterium butyricum | 1 |
| Oxalobacter formigenes | 1 |
| Setophoma sacchari | 1 |
| Citrus trifoliata | 1 |
| Citrus hanaju | 1 |
| Citrus clementina | 1 |
| Pseudomonas sp. ENV2030 | 1 |
| Pseudomonas putida JS444 | 1 |
| Pseudomonas putida DLL-E4 | 1 |
| Pseudomonas sp. NyZ402 | 1 |
| Moraxella | 1 |
| Pavlova pinguis | 1 |
| Batis maritima | 1 |
| Endocladia muricata | 1 |
| Cupriavidus oxalaticus | 1 |
| Lawsonia inermis | 1 |
| Rhodococcus opacus SAO101 | 1 |
| Sphingobium sp. UG30 | 1 |
| Serratia sp. DS001 | 1 |
| Rhodococcus sp. PN1 | 1 |
| Lactobacillus rhamnosus GG | 1 |
| Telluria mixta | 1 |
| Methylovorus sp. MP688 | 1 |
| Paraburkholderia phymatum | 1 |
| Malus sp | 1 |
| Malus pumila | 1 |
| Malus hupehensis | 1 |
| Paul's Scarlet Climber Rose | 1 |
| Pelargonium crispum | 1 |
| Erysiphaceae | 1 |
| Thioalkalivibrio thiocyanoxidans | 1 |
| Camellia sinensis sinensis | 1 |
| Colchicum autumnale | 1 |
| Populus tremula x Populus alba | 1 |
| Lemna minor | 1 |
| Gordonia sp. TY-5 | 1 |
| Acholeplasma laidlawii | 1 |
| Mycobacterium sp. Py1 | 1 |
| Mycobacterium goodii strain 12523 | 1 |
| Anisodus acutangulus | 1 |
| Afipia felis 25E1 | 1 |
| Afipia felis 25V | 1 |
| Afipia felis 15B1 | 1 |
| Methylosulfonomonas sp. M2 | 1 |
| Marinosulfonomonas methylotropha | 1 |
| Methylosulfonomonas methylovora | 1 |
| Rhodococcus erythropolis MI2 | 1 |
| Sphingobacterium mizutaii | 1 |
| Desulfosarcina cetonica | 1 |
| Desulfococcus biacutus | 1 |
| Advenella mimigardefordensis DPN7 | 1 |
| Paracoccus pantotrophus NKNCYSA | 1 |
| [Clostridium] scindens ATCC 35704 | 1 |
| [Clostridium] hylemonae DSM 15053 | 1 |
| Clostridium sp. TO-931 | 1 |
| [Clostridium] scindens | 1 |
| Hyphomicrobium denitrificans WU-K217 | 1 |
| Syntrophomonas wolfei | 1 |
| Dorea longicatena | 1 |
| Anaerotruncus colihominis | 1 |
| Erythroxylum coca | 1 |
| Clostridium paraputrificum D 762-06 | 1 |
| Clostridium innocuum D1144/3 | 1 |
| Blautia producta K 2/25.1 | 1 |
| Clostridium sp. ATCC 29733 | 1 |
| Variovorax paradoxus | 1 |
| a non specified bacterium (Kondo 77) | 1 |
| [Ruminococcus] gnavus | 1 |
| Lachnospiraceae bacterium | 1 |
| Pseudomonas sp. NCIB 10590 | 1 |
| Mycobacterium sp. NRRL B-3683 | 1 |
| Arthrobacter sp. SLBN-53 | 1 |
| Mycolicibacterium neoaurum VKM Ac-1815D | 1 |
| Ralstonia sp. EDS1 | 1 |
| Pseudomonas deceptionensis | 1 |
| Maricaulis maris MCS10 | 1 |
| Bradyrhizobium diazoefficiens | 1 |
| Mycobacterium avium complex (MAC) | 1 |
| Solanum habrochaites 2861 | 1 |
| Solanum habrochaites 2098 | 1 |
| Solanum habrochaites 1777 | 1 |
| Solanum habrochaites 1731 | 1 |
| Bacillariophyta | 1 |
| Pseudomonas putida GPo1 | 1 |
| Alternaria brassicicola ATCC 96836 | 1 |
| Zoogloea ramigera | 1 |
| Azotobacter beijerinckii | 1 |
| Nicotiana glutinosa | 1 |
| Croton | 1 |
| Croton sublyratus | 1 |
| Actinidia eriantha | 1 |
| Wachendorfia thyrsiflora | 1 |
| Anigozanthos preissii | 1 |
| Senecio vernalis | 1 |
| Senecio vulgaris | 1 |
| Streptomyces melanosporofaciens | 1 |
| Rhodococcus sp. TE1 | 1 |
| Mycobacterium sp. DSM 3803 | 1 |
| Nocardioides sp. C190 | 1 |
| Teleostei | 1 |
| Physarum polycephalum | 1 |
| Paenarthrobacter aurescens TC1 | 1 |
| Nocardioides sp. SP12 | 1 |
| Aminobacter ciceronei | 1 |
| Geobacillus thermodenitrificans NG80-2 | 1 |
| Pimpinella | 1 |
| Salvia fruticosa | 1 |
| Salvia rosmarinus | 1 |
| Taxus x media | 1 |
| Taxus canadensis | 1 |
| Taxus brevifolia | 1 |
| Taxus baccata | 1 |
| Candidatus Endobugula sertula | 1 |
| Rhodococcus sp | 1 |
| Pinus banksiana | 1 |
| Salinispora tropica | 1 |
| Rhodococcus erythropolis JCM 6824 | 1 |
| Actinosynnema mirum DSM 43827 | 1 |
| Pseudonocardia sp. P1 | 1 |
| Stigmatella aurantiaca Sg a15 | 1 |
| Vibrio fluvialis JS17 | 1 |
| Prauserella rugosa | 1 |
| Desulfuromonas acetoxidans DSM 684 | 1 |
| Aloe ferox | 1 |
| Butyrivibrio fibrisolvens | 1 |
| Thermacetogenium phaeum DSM 12270 | 1 |
| Methanolobus psychrophilus R15 | 1 |
| Geobacter lovleyi SZ | 1 |
| Pseudomonas sp. strain VM15C | 1 |
| Alcaligenes faecalis KK314 | 1 |
| Sphingopyxis sp. 113P3 | 1 |
| Methanocella conradii HZ254 | 1 |
| Geobacter sulfurreducens PCA | 1 |
| Desulfurivibrio alkaliphilus AHT 2 | 1 |
| Desulfosporosinus orientis DSM 765 | 1 |
| Desulfosporosinus acidiphilus SJ4 | 1 |
| Desulfofarcimen acetoxidans DSM 771 | 1 |
| Desulfocapsa sulfexigens DSM 10523 | 1 |
| Desulfatibacillum alkenivorans AK-01 | 1 |
| Desulfallas gibsoniae DSM 7213 | 1 |
| Acetohalobium arabaticum | 1 |
| Streptomyces sp. KCTC 0041BP | 1 |
| Thiobacillus thioparus THI 115 | 1 |
| Thiohalophilus thiocyanatoxydans | 1 |
| Acinetobacter junii | 1 |
| Suberites domuncula | 1 |
| Scapharca broughtonii | 1 |
| Pecten maximus | 1 |
| Pecten jacobaeus | 1 |
| Patiria pectinifera | 1 |
| Meretrix lusoria | 1 |
| Marphysa sanguinea | 1 |
| Littorina littorea | 1 |
| Haliotis tuberculata lamellosa | 1 |
| Halichondria japonica | 1 |
| Cellana grata | 1 |
| Busycotypus canaliculatus | 1 |
| Arabella iricolor | 1 |
| symbiont bacterium of Paederus fuscipes | 1 |
| Paederus sabaeus endosymbiont | 1 |
| Desulfofundulus kuznetsovii DSM 6115 | 1 |
| Drosophila <flies,genus> | 1 |
| Raoultella planticola | 1 |
| Lactobacillus sp. 30A | 1 |
| Tetragenococcus muriaticus | 1 |
| Photobacterium damselae | 1 |
| Pediococcus parvulus | 1 |
| uncultured bacterium HF130_AEPn_1 | 1 |
| Escherichia coli O7:K1 | 1 |
| Thioalkalivibrio thiocyanodenitrificans | 1 |
| Planococcus citreus | 1 |
| Nesterenkonia halobia | 1 |
| Deinococcus radiophilus | 1 |
| Populus trichocarpa x Populus deltoides | 1 |
| Microbacterium oxydans IH-35A | 1 |
| Acinetobacter sp. SE19 | 1 |
| Brachymonas petroleovorans CHX | 1 |
| Brevibacterium epidermidis | 1 |
| Nocardia globerula | 1 |
| Renibacterium salmoninarum | 1 |
| Tetragenococcus koreensis | 1 |
| Enterobacter asburiae | 1 |
| Enterobacter hormaechei | 1 |
| Pantoea stewartii | 1 |
| Pseudomonas alcaligenes | 1 |
| Pseudomonas chlororaphis | 1 |
| Pseudomonas clemancea | 1 |
| Pseudomonas collierea | 1 |
| Pseudomonas teessidea | 1 |
| Blighia sapida | 1 |
| Pseudomonas sp. 7B | 1 |
| Euphorbia lagascae | 1 |
| Fischerella sp. SAG 46.79 | 1 |
| Fischerella muscicola UTEX 1829 | 1 |
| Pseudomonas fluorescens 23F | 1 |
| Streptomyces peucetius caesius ATCC 27952 | 1 |
| Dugesia japonica | 1 |
| Vernonia galamensis | 1 |
| Crepis palaestina | 1 |
| Candida methylica | 1 |
| Cucurbita pepo medullosa | 1 |
| Euglena | 1 |
| Lamium galeobdolon | 1 |
| Hordeum lechleri | 1 |
| Consolida orientalis | 1 |
| Plumbago indica | 1 |
| Plumbago europaea | 1 |
| Amycolatopsis orientalis | 1 |
| Streptomyces achromogenes rubradiris | 1 |
| Metschnikowia pulcherrima | 1 |
| Pythium irregulare | 1 |
| Phytophthora cactorum | 1 |
| Pseudomonas sp. YL | 1 |
| Pantoea stewartii stewartii | 1 |
| Escherichia coli K-12 substr. DH10B | 1 |
| Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | 1 |
| Pyrobaculum neutrophilum V24Sta | 1 |
| Streptomyces mycarofaciens | 1 |
| Agrobacterium sp. 525a | 1 |
| [Butyribacterium] methylotrophicum | 1 |
| Syntrophococcus sucromutans | 1 |
| Sporomusa termitida | 1 |
| Sporomusa malonica | 1 |
| Moorella thermoautotrophica | 1 |
| Acetitomaculum ruminis | 1 |
| Paecilomyces sp. (in: Eurotiomycetes) | 1 |
| Microbacterium sp | 1 |
| Clostridium perfringens A99 | 1 |
| Roseiflexus sp. RS-1 | 1 |
| Roseiflexus castenholzii | 1 |
| Chloroflexus aggregans | 1 |
| Rhodiola sachalinensis | 1 |
| Rhodiola rosea | 1 |
| Taraxacum kok-saghyz | 1 |
| Escherichia coli O52 | 1 |
| Pseudomonas sp. MS | 1 |
| Escherichia coli O44:K74 | 1 |
| Nitrosopumilus maritimus | 1 |
| Crepis alpina | 1 |
| Cantharellus formosus | 1 |
| Xanthomonas translucens | 1 |
| Pseudomonas sp. HZN6 | 1 |
| Pseudomonas putida S16 | 1 |
| Nepeta racemosa | 1 |
| Nepeta cataria | 1 |
| Brevibacterium sp. DPO 1361 | 1 |
| Alcaligenes sp. CF8 | 1 |
| Pseudomonas sp. CBB1 | 1 |
| Dicranum scoparium | 1 |
| Ceratodon purpureus | 1 |
| Pseudomonas chloritidismutans | 1 |
| Ideonella dechloratans | 1 |
| Azospira oryzae | 1 |
| Taphrina wiesneri | 1 |
| Taphrina pruni | 1 |
| Taphrina deformans | 1 |
| Coffea eugenioides | 1 |
| Agrobacterium tumefaciens S33 | 1 |
| Shinella sp. HZN7 | 1 |
| Ochrobactrum rhizosphaerae SJY1 | 1 |
| Escherichia coli K4 | 1 |
| Actinomadura kijaniata | 1 |
| Coffea liberica | 1 |
| Coffea liberica dewevrei | 1 |
| Coffea abeokutae | 1 |
| Pseudomonas savastanoi | 1 |
| Planococcus antarcticus | 1 |
| Paenibacillus terrae | 1 |
| Eggerthella lenta | 1 |
| Desulfosporosinus youngiae | 1 |
| Desulfosporosinus acidiphilus | 1 |
| Cryptobacterium sp. CAG:338 | 1 |
| Collinsella tanakaei | 1 |
| Clostridium colicanis | 1 |
| Clostridioides difficile CD196 | 1 |
| Clostridioides difficile 630 | 1 |
| Bacillus nealsonii | 1 |
| Bacillus bataviensis | 1 |
| Sclerotinia sclerotiorum | 1 |
| Fomitopsis palustris | 1 |
| Candidatus Scalindua wagneri | 1 |
| Candidatus Scalindua brodae | 1 |
| Candidatus Kuenenia stuttgartiensis | 1 |
| Candidatus Jettenia caeni | 1 |
| Candidatus Brocadia anammoxidans | 1 |
| Candidatus Anammoxoglobus | 1 |
| Agrobacterium | 1 |
| Shewanella denitrificans OS217 | 1 |
| Pseudomonas putida WS | 1 |
| Pseudomonas putida No. 352 | 1 |
| Pseudomonas putida KD6 | 1 |
| Pseudomonas putida C1 | 1 |
| Pseudomonas putida 40 | 1 |
| Gimesia maris DSM 8797 | 1 |
| Rhododendron dauricum | 1 |
| Methanopyrus kandleri AV19 | 1 |
| Talaromyces stipitatus | 1 |
| Populus alba | 1 |
| Mycobacterium tuberculosis variant bovis AF2122/97 | 1 |
| Fischerella sp. ATCC 43239 | 1 |
| Pinus sabiniana | 1 |
| Pinus ponderosa | 1 |
| Azospira sp. PCC | 1 |
| Azospira sp. KJ | 1 |
| Dechloromonas sp. PC1 | 1 |
| Dechloromonas sp. MissR | 1 |
| Dechloromonas agitata | 1 |
| Azospirillum sp. TTI | 1 |
| Actinoplanes missouriensis | 1 |
| [Bacillus] selenitireducens | 1 |
| Sulfurospirillum barnesii | 1 |
| Sulfurospirillum arsenophilum | 1 |
| Chrysiogenes arsenatis | 1 |
| Anaerobacillus arseniciselenatis | 1 |
| Vaccinia virus | 1 |
| Streptococcus | 1 |
| Solanum | 1 |
| Streptomyces ravidus | 1 |
| Clostridium ventriculi | 1 |
| Acetobacter | 1 |
| Thermodesulfovibrio yellowstonii | 1 |
| Thermodesulforhabdus norvegica | 1 |
| Desulfovibrio vulgaris Hildenborough | 1 |
| Desulfofundulus kuznetsovii | 1 |
| Desulfallas geothermicus | 1 |
| Desulfofundulus australicus | 1 |
| Archaeoglobus profundus | 1 |
| Bacillus azotoformans | 1 |
| Pyrobaculum arsenaticum | 1 |
| Zygosaccharomyces rouxii | 1 |
| Prochloron didemni P2-Fiji | 1 |
| Saccharopolyspora | 1 |
| Dietzia sp. CQ4 | 1 |
| Synechocystis sp. PCC 6803 substr. Kazusa | 1 |
| Oryza | 1 |
| Haloarcula japonica | 1 |
| Lyngbya majuscula | 1 |
| Fusarium phaseoli | 1 |
| Xenorhabdus nematophila ATCC 19061 | 1 |
| Photorhabdus luminescens | 1 |
| Halorubrum lacusprofundi | 1 |
| Crambe hispanica abyssinica | 1 |
| Janthinobacterium lividum | 1 |
| Duganella sp. B2 | 1 |
| Collimonas sp. CT | 1 |
| Chromobacterium violaceum ATCC 12472 | 1 |
| Streptomyces cattleya | 1 |
| Trypanosoma vivax | 1 |
| Trypanosoma brucei brucei | 1 |
| Eukaryota | 1 |
| Streptomyces aizunenesis NRRL-B-11277 | 1 |
| Yersinia sp. EA015 | 1 |
| Tanacetum cinerariifolium | 1 |
| Pseudomonas simiae | 1 |
| Paraburkholderia phytofirmans | 1 |
| Paraburkholderia bryophila | 1 |
| Psilocybe cyanescens | 1 |
| Psilocybe cubensis | 1 |
| Bacillus amyloliquefaciens 140N | 1 |
| Paenibacillus polymyxa SC2 | 1 |
| Bacillus atrophaeus 1942 | 1 |
| Bacillus velezensis FZB42 | 1 |
| Pseudomonas fluorescens BL915 | 1 |
| Pseudomonas chlororaphis aureofaciens | 1 |
| Burkholderia cepacia complex | 1 |
| Vitis labrusca x Vitis vinifera | 1 |
| Rubus idaeus strigosus | 1 |
| Mangifera indica | 1 |
| Ananas comosus | 1 |
| Pyrococcus sp. ST04 | 1 |
| Caldicellulosiruptor saccharolyticus | 1 |
| Pseudo-nitzschia multiseries | 1 |
| Robbsia andropogonis | 1 |
| Paracoccus laeviglucosivorans | 1 |
| Aspergillus clavatus NRRL 1980 | 1 |
| Penicillium urticae | 1 |
| Penicillium griseofulvum | 1 |
| Cassia coluteoides | 1 |
| Micromonospora rosaria | 1 |
| Clostridium SB4 | 1 |
| Clostridium subterminale | 1 |
| Clostridium peptidivorans | 1 |
| Streptomyces zaomyceticus | 1 |
| Streptomyces narbonensis | 1 |
| Streptomyces flavochromogenes | 1 |
| Streptomyces felleus | 1 |
| Vibrio sp. EJY3 | 1 |
| Pseudoalteromonas atlantica T6c | 1 |
| Postechiella marina | 1 |
| Tritrichomonas suis | 1 |
| Phytomonas | 1 |
| Leishmania mexicana | 1 |
| Leishmania infantum | 1 |
| Saccharolobus shibatae | 1 |
| Halobacterium sp. JP-6 | 1 |
| Mycoplasma pneumoniae | 1 |
| Sinapis alba | 1 |
| Isatis tinctoria | 1 |
| Streptococcus ratti | 1 |
| Spiroplasma citri | 1 |
| Mycoplasma hominis | 1 |
| Lactobacillus hilgardii | 1 |
| Aphanocapsa | 1 |
| Lathyrus sativus | 1 |
| [Clostridium] symbiosum | 1 |
| [Clostridium] sporosphaeroides | 1 |
| Acidaminococcus fermentans | 1 |
| Thiocapsa roseopersicina M11 | 1 |
| Thermosipho melanesiensis | 1 |
| Thermoanaerobacter pseudethanolicus | 1 |
| Natranaerobius thermophilus | 1 |
| Fervidobacterium nodosum | 1 |
| Alkaliphilus oremlandii | 1 |
| Alkaliphilus metalliredigens | 1 |
| Rhodococcus sp. strain SY1 | 1 |
| Pseudomonas putida DS1 | 1 |
| Alcaligenes sp. strain E1 | 1 |
| Acinetobacter sp. strain 20B | 1 |
| Thiobacillus thioparus T5 | 1 |
| Methylophaga thiooxydans | 1 |
| Tellima grandiflora | 1 |
| Lachnospiraceae bacterium 19gly4 | 1 |
| Quercus rubra | 1 |
| Malonomonas rubra | 1 |
| Palmaria palmata | 1 |
| Digenea simplex | 1 |
| Clostridium tetani | 1 |
| Clostridium malenominatum | 1 |
| Hathewaya limosa | 1 |
| Anaeromusa acidaminophila | 1 |
| Pantoea cypripedii | 1 |
| Methanobacterium formicicum | 1 |
| Piper nigrum | 1 |
| Wollastonia biflora | 1 |
| Shewanella amazonensis SB2B | 1 |
| Ulva intestinalis | 1 |
| Melosira nummuloides | 1 |
| Tetraselmis | 1 |
| Ulva lactuca | 1 |
| Plasmodium falciparum HB3 | 1 |
| Bacillus niacini | 1 |
| Albizia tanganyicensis | 1 |
| Hedera helix | 1 |
| Coriandrum sativum | 1 |
| Propionibacterium cyclohexanicum | 1 |
| Pectinatus frisingensis | 1 |
| Ruminococcus sp. PO1-3 | 1 |
| Methylobacillus flagellatus KT | 1 |
| Eubacterium barkeri | 1 |
| Dolichandra unguis-cati | 1 |
| Streptomyces noursei ATCC 11455 | 1 |
| ruegeria frisia | 1 |
| Desulfobacterium sp. PM4 | 1 |
| Desulfobacterium niacini | 1 |
| Desulfobacterium vacuolatum | 1 |
| Candidatus Pelagibacter ubique HTCC1062 | 1 |
| Ruegeria atlantica | 1 |
| Pseudomonas putida N-9 | 1 |
| Pseudomonas fluorescens TN5 | 1 |
| Pseudomonas fluorescens ATCC 23728 | 1 |
| Bordetella bronchiseptica RB50 | 1 |
| gamma proteobacterium HTCC2207 | 1 |
| Sagittula stellata E-37 | 1 |
| Burkholderia ambifaria AMMD | 1 |
| Halodesulfovibrio aestuarii DSM 10141 | 1 |
| Vertebrata lanosa | 1 |
| Fusarium lateritium | 1 |
| Crypthecodinium cohnii | 1 |
| Neosiphonia paniculata | 1 |
| Ulva curvata | 1 |
| DSMP-degrading bacterium LFR | 1 |
| Sulfitobacter sp. EE-36 | 1 |
| Sulfitobacter sp. NAS-14.1 | 1 |
| Yoonia vestfoldensis SKA53 | 1 |
| Labrenzia aggregata IAM 12614 | 1 |
| Dinoroseobacter shibae DFL 12 = DSM 16493 | 1 |
| Pseudooceanicola batsensis HTCC2597 | 1 |
| Maritimibacter alkaliphilus HTCC2654 | 1 |
| Fulvimarina pelagi HTCC2506 | 1 |
| Rhodobacter sphaeroides ATCC 17029 | 1 |
| Aspergillus sydowii | 1 |
| Sipunculus nudus | 1 |
| Mytilus trossulus | 1 |
| Mytilus galloprovincialis | 1 |
| Mytilus californianus | 1 |
| Corbicula japonica | 1 |
| Burkholderia cepacia R34 | 1 |
| Burkholderia sp. DNT | 1 |
| Burkholderia cepacia JS850 | 1 |
| Hydrogenophaga palleronii JS863 | 1 |
| Pseudomonas stutzeri ZWLR2-1 | 1 |
| Physaria | 1 |
| Lunaria annua | 1 |
| Herbaspirillum seropedicae | 1 |
| Setaria italica | 1 |
| Kluyveromyces marxianus | 1 |
| Chelatococcus asaccharovorans | 1 |
| Paraburkholderia sacchari | 1 |
| Olea europaea | 1 |
| Treponema vincentii | 1 |
| Treponema phagedenis | 1 |
| Anabaena sp. 90 | 1 |
| Fluoribacter bozemanae | 1 |
| Actinomycete S4 | 1 |
| Lemna aequinoctialis | 1 |
| Diutina rugosa | 1 |
| Diutina catenulata | 1 |
| Candida albicans SC5314 | 1 |
| Xanthomonas campestris pv. campestris | 1 |
| Bradyrhizobium sp. SEMIA 6144 | 1 |
| Bradyrhizobium diazoefficiens USDA 110 | 1 |
| [Brevibacterium] flavum | 1 |
| Leptospira meyeri | 1 |
| Pseudomonas fluorescens KU-7 | 1 |
| Trichosanthes kirilowii | 1 |
| Punica granatum | 1 |
| Vernicia fordii | 1 |
| Momordica charantia | 1 |
| Dimorphotheca sinuata | 1 |
| Heliobacterium modesticaldum Ice1 | 1 |
| Betula | 1 |
| Betula pubescens | 1 |
| Triticum spelta | 1 |
| Halomonas sp. HTNK1 | 1 |
| Pseudomonas sp. B<sub>2</sub>aba | 1 |
| Escherichia coli O5 | 1 |
| Escherichia coli O104 | 1 |
| Pseudomonas sp. P<sub>G</sub> | 1 |
| Pseudomonas sp. ATCC 17483 | 1 |
| pseudomonas putida NP | 1 |
| Pseudomonas putida ATCC 17484 | 1 |
| Centaurium erythraea | 1 |
| Syntrophus gentianae | 1 |
| Syntrophus buswellii | 1 |
| Syntrophus aciditrophicus | 1 |
| Klebsiella pneumoniae O3 | 1 |
| Escherichia coli O9a | 1 |
| delta proteobacterium N47 | 1 |
| bacterium enrichment culture clone N47 | 1 |
| Moritella marina ATCC 15381 | 1 |
| Arthrobacter protophormiae RKJ100 | 1 |
| Escherichia coli O86:B7 | 1 |
| Escherichia coli O86 | 1 |
| Thraustochytrium sp. ATCC21685 | 1 |
| Pavlova lutheri | 1 |
| Marchantia polymorpha | 1 |
| Thermococcus sp. B1001 | 1 |
| Streptococcus uberis | 1 |
| Schizosaccharomyces pombe 972h- | 1 |
| Pyrococcus furiosus DSM 3638 | 1 |
| Viburnum furcatum | 1 |
| Achromobacter sp. Quastel 52 | 1 |
| Aequorea victoria | 1 |
| Aequorea aequorea | 1 |
| Streptomyces sp. strain V-1 | 1 |
| Pseudomonas fluorescens AN103 | 1 |
| Amycolatopsis sp. HR167 | 1 |
| Amycolatopsis sp. ATCC 39116 | 1 |
| Pyrocystis noctiluca | 1 |
| Pyrocystis lunula | 1 |
| Pyrocystis fusiformis | 1 |
| Protoperidinium depressum | 1 |
| Noctiluca scintillans | 1 |
| Lingulodinium polyedra | 1 |
| Alexandrium tamarense | 1 |
| Pseudomonas entomophila L48 | 1 |
| Pseudomonas Sp. PB16 | 1 |
| Nitrosospira tenuis | 1 |
| Nitrosospira briensis | 1 |
| Nitrosomonas eutropha | 1 |
| Nitrosomonas europaea | 1 |
| Nitrosomonas cryotolerans | 1 |
| Nitrosomonas | 1 |
| Watasenia scintillans | 1 |
| Photinus pyralis | 1 |
| Luciola mingrelica | 1 |
| Aquatica lateralis | 1 |
| Neonothopanus nambi | 1 |
| Neonothopanus gardneri | 1 |
| Mycena chlorophos | 1 |
| Starmerella bombicola | 1 |
| Yersinia kristensenii | 1 |
| Yersinia intermedia | 1 |
| Yersinia frederiksenii | 1 |
| Shigella flexneri | 1 |
| Shigella boydii | 1 |
| Staphylococcus aureus aureus | 1 |
| Renilla reniformis | 1 |
| Renilla muelleri | 1 |
| Ruminococcus albus 8 | 1 |
| Photobacterium phosphoreum | 1 |
| Staphylococcus aureus aureus N315 | 1 |
| Sulfurimonas denitrificans | 1 |
| Desulfobacter hydrogenophilus | 1 |
| Candidatus Arcobacter sulfidicus | 1 |
| Staphylococcus pseudintermedius | 1 |
| Staphylococcus aureus aureus NCTC 8325 | 1 |
| Shewanella denitrificans | 1 |
| Methylobacterium nodulans | 1 |
| Cupriavidus metallidurans | 1 |
| Helicobacter pylori SS1 | 1 |
| Peptoclostridium litorale | 1 |
| Peptoclostridium acidaminophilum | 1 |
| Clostridium aceticum | 1 |
| Bordetella parapertussis | 1 |
| Bordetella bronchiseptica | 1 |
| Achromobacter xylosoxidans | 1 |
| Acinetobacter baumannii AYE | 1 |
| Acinetobacter baumannii ACICU | 1 |
| Thermincola potens JR | 1 |
| Methanohalophilus mahii DSM 5219 | 1 |
| Methanohalobium evestigatum Z-7303 | 1 |
| Methanococcoides burtonii DSM 6242 | 1 |
| Desulfitobacterium hafniense DCB-2 | 1 |
| Bilophila wadsworthia 3_1_6 | 1 |
| Acetohalobium arabaticum DSM 5501 | 1 |
| Brevibacillus laterosporus | 1 |
| Bacillus mycoides | 1 |
| Aeromonas salmonicida | 1 |
| Sporosarcina globispora | 1 |
| Brevibacterium | 1 |
| Methanolobus tindarius | 1 |
| Methanoculleus marisnigri | 1 |
| Aspergillus quadricinctus | 1 |
| Sophora flavescens | 1 |
| Alangium lamarckii | 1 |
| Carapichea ipecacuanha | 1 |
| Organism | Number of pathways |
| a non specified bacterium (Kondo 77) | 1 |
| Abies grandis | 12 |
| Acanthamoeba sp | 1 |
| Acer pseudoplatanus | 2 |
| Acetitomaculum ruminis | 1 |
| Acetoanaerobium sticklandii | 4 |
| Acetobacter | 1 |
| Acetobacter aceti | 4 |
| Acetobacter pasteurianus | 2 |
| Acetobacterium carbinolicum | 2 |
| Acetobacterium woodii | 4 |
| Acetohalobium arabaticum | 1 |
| Acetohalobium arabaticum DSM 5501 | 1 |
| Acheta domesticus | 1 |
| Acholeplasma laidlawii | 1 |
| Achromobacter | 1 |
| Achromobacter denitrificans | 2 |
| Achromobacter ruhlandii | 2 |
| Achromobacter sp. Quastel 52 | 1 |
| Achromobacter superficialis | 1 |
| Achromobacter xylosoxidans | 1 |
| Achromobacter xylosoxidans NCIMB 10751 | 3 |
| Acidaminococcus fermentans | 1 |
| Acidianus | 1 |
| Acidianus ambivalens | 6 |
| Acidianus brierleyi | 1 |
| Acidianus infernus | 1 |
| Acidianus sp. A1-3 | 1 |
| Acidianus tengchongensis | 1 |
| Acidiphilium | 1 |
| Acidiphilium acidophilum | 5 |
| Acidipropionibacterium acidipropionici | 3 |
| Acidithiobacillus ferrooxidans | 14 |
| Acidithiobacillus thiooxidans | 6 |
| Acidothermus cellulolyticus 11B | 1 |
| Acidovorax avenae | 1 |
| Acidovorax citrulli | 3 |
| Acidovorax facilis | 2 |
| Acidovorax sp. JS42 | 2 |
| Acinetobacter | 2 |
| Acinetobacter baumannii | 2 |
| Acinetobacter baumannii ACICU | 1 |
| Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | 1 |
| Acinetobacter baumannii AYE | 1 |
| Acinetobacter baylyi ADP1 | 8 |
| Acinetobacter calcoaceticus | 9 |
| Acinetobacter calcoaceticus anitratus | 2 |
| Acinetobacter haemolyticus | 1 |
| Acinetobacter junii | 1 |
| Acinetobacter lwoffii | 1 |
| Acinetobacter lwoffii K24 | 1 |
| Acinetobacter sp. NCIMB9871 | 2 |
| Acinetobacter sp. SE19 | 1 |
| Acinetobacter sp. strain 20B | 1 |
| Acinetobacter sp. YAA | 1 |
| Acremonium chrysogenum | 3 |
| Actinidia | 1 |
| Actinidia chinensis | 3 |
| Actinidia deliciosa | 3 |
| Actinidia eriantha | 1 |
| Actinoalloteichus cyanogriseus | 3 |
| Actinobacillus succinogenes 130Z | 1 |
| Actinobacteria <actinobacteria> | 1 |
| Actinomadura | 1 |
| Actinomadura kijaniata | 1 |
| Actinomadura madurae | 1 |
| Actinomadura pelletieri | 1 |
| Actinomyces bovis | 2 |
| Actinomyces israelii | 1 |
| Actinomyces viscosus | 1 |
| Actinomycete S4 | 1 |
| Actinoplanes missouriensis | 1 |
| Actinoplanes utahensis | 1 |
| Actinopolyspora halophila | 2 |
| Actinosynnema mirum | 1 |
| Actinosynnema mirum DSM 43827 | 1 |
| Adiantum capillus-veneris | 2 |
| Adlercreutzia equolifaciens | 1 |
| Adonis aestivalis | 1 |
| Adonis aestivalis palaestina | 2 |
| Advenella mimigardefordensis | 2 |
| Advenella mimigardefordensis DPN7 | 1 |
| Aedes aegypti | 3 |
| Aequorea aequorea | 1 |
| Aequorea victoria | 1 |
| Aerococcus viridans | 3 |
| Aeromonas caviae | 6 |
| Aeromonas hydrophila | 8 |
| Aeromonas jandaei | 1 |
| Aeromonas salmonicida | 1 |
| Aeropyrum pernix | 5 |
| Aesculus | 1 |
| Afipia felis 15B1 | 1 |
| Afipia felis 25E1 | 1 |
| Afipia felis 25V | 1 |
| Agapanthus africanus | 4 |
| Agaricus bisporus | 1 |
| Aggregatibacter actinomycetemcomitans | 3 |
| Agrius cingulata | 1 |
| Agrobacterium | 1 |
| Agrobacterium aurantiacum | 1 |
| Agrobacterium fabrum C58 | 10 |
| Agrobacterium radiobacter K84 | 3 |
| Agrobacterium radiobacter S2 | 1 |
| Agrobacterium rhizogenes | 1 |
| Agrobacterium sp. 525a | 1 |
| Agrobacterium sp. DSM 8888 | 2 |
| Agrobacterium tumefaciens | 25 |
| Agrobacterium tumefaciens S33 | 1 |
| Agromyces mediolanus | 4 |
| Ajuga reptans | 1 |
| Alangium lamarckii | 1 |
| Albizia julibrissin | 1 |
| Albizia tanganyicensis | 1 |
| Alcaligenes faecalis | 7 |
| Alcaligenes faecalis KK314 | 1 |
| Alcaligenes faecalis M3A | 2 |
| Alcaligenes sp. CF8 | 1 |
| Alcaligenes sp. N-42 | 1 |
| Alcaligenes sp. O-1 | 4 |
| Alcaligenes sp. strain A175 | 1 |
| Alcaligenes sp. strain E1 | 1 |
| Alcaligenes sp. strain L6 | 1 |
| Alcaligenes sp. strain OBB65 | 1 |
| Alcaligenes sp. XY-234 | 1 |
| Alcaligenes viscolactis S-2 | 1 |
| Alexandrium tamarense | 1 |
| Algoriphagus sp. KK10202C | 1 |
| Alicycliphilus denitrificans | 2 |
| Aliivibrio fischeri | 4 |
| Aliivibrio salmonicida LFI1238 | 2 |
| Alistipes finegoldii | 1 |
| Alkaliphilus metalliredigens | 1 |
| Alkaliphilus oremlandii | 1 |
| Allium aflatunense | 2 |
| Allium altaicum | 2 |
| Allium altyncolicum | 2 |
| Allium ampeloprasum | 3 |
| Allium ascalonicum | 2 |
| Allium cepa | 9 |
| Allium cepa aggregatum | 1 |
| Allium chinense | 2 |
| Allium fistulosum | 1 |
| Allium nutans | 1 |
| Allium ochotense | 2 |
| Allium sativum | 3 |
| Allium schoenoprasum | 1 |
| Allium siculum | 1 |
| Allium tuberosum | 1 |
| Allium ursinum | 1 |
| Allium victorialis | 2 |
| Allochromatium vinosum | 15 |
| Aloe arborescens | 4 |
| Aloe ferox | 1 |
| Alternaria brassicicola ATCC 96836 | 1 |
| Alternaria solani | 1 |
| Alteromonas macleodii | 1 |
| Alteromonas sp. ATCC 43554 | 1 |
| Amanita muscaria | 5 |
| Amaranthus hybridus cruentus | 1 |
| Amaranthus hypochondriacus | 1 |
| Amauroascus aureus | 1 |
| Ambrosiozyma llanquihuensis | 1 |
| Aminobacter aminovorans | 4 |
| Aminobacter ciceronei | 1 |
| Ammi majus | 1 |
| Ammonifex degensii | 1 |
| Amorpha fruticosa | 2 |
| Amycolatopsis lactamdurans | 3 |
| Amycolatopsis mediterranei | 4 |
| Amycolatopsis mediterranei U32 | 1 |
| Amycolatopsis methanolica | 2 |
| Amycolatopsis orientalis | 1 |
| Amycolatopsis sp. ATCC 39116 | 1 |
| Amycolatopsis sp. HR167 | 1 |
| Amylomyces rouxii | 1 |
| Anabaena bergii | 1 |
| Anabaena sp. 90 | 1 |
| Anaerobacillus arseniciselenatis | 1 |
| Anaeromusa acidaminophila | 1 |
| Anaerotignum propionicum | 4 |
| Anaerotruncus colihominis | 1 |
| Anaerovibrio lipolyticus | 1 |
| Ananas comosus | 1 |
| Anchusa officinalis | 2 |
| Ancylobacter aquaticus | 1 |
| Ancylobacter vacuolatus | 1 |
| Anemone leveillei | 2 |
| Aneurinibacillus migulanus | 1 |
| Aneurinibacillus thermoaerophilus | 1 |
| Aneurinibacillus thermoaerophilus L420-91 | 2 |
| Anigozanthos preissii | 1 |
| Anisodus acutangulus | 1 |
| Annwoodia aquaesulis | 2 |
| Anolis carolinensis | 1 |
| Anthracobia melaloma | 1 |
| Anthriscus sylvestris | 2 |
| Antirrhinum majus | 2 |
| Apantesis nevadensis geneura | 1 |
| Aphanizomenon flos-aquae | 2 |
| Aphanoascus verrucosus | 1 |
| Aphanocapsa | 1 |
| Aphanothece halophytica | 3 |
| Aphelandra squarrosa | 2 |
| Apinisia graminicola | 1 |
| Apis mellifera | 3 |
| Apium graveolens | 2 |
| Aplysia californica | 1 |
| Aquatica lateralis | 1 |
| Aquifex aeolicus | 10 |
| Aquifex aeolicus VF5 | 2 |
| Aquifex pyrophilus | 2 |
| Aquilaria crassna | 1 |
| Aquilegia vulgaris | 1 |
| Aquincola tertiaricarbonis | 1 |
| Arabella iricolor | 1 |
| Arabidopsis | 2 |
| Arabidopsis lyrata | 2 |
| Arabidopsis thaliana | 15 |
| Arabidopsis thaliana col | 345 |
| Arabidopsis thaliana Cvi | 3 |
| Arabidopsis thaliana ler | 4 |
| Arabidopsis thaliana Ws | 1 |
| Arachis hypogaea | 1 |
| Arachnomyces minimus | 1 |
| Arachnotheca glomerata | 1 |
| Archaea | 2 |
| Archaeoglobus fulgidus | 12 |
| Archaeoglobus fulgidus 7324 | 2 |
| Archaeoglobus profundus | 1 |
| Arctia caja | 1 |
| Arenicola marina | 2 |
| Arenimonas malthae | 1 |
| Argemone mexicana | 2 |
| Armillaria gallica | 1 |
| Armillaria mellea | 1 |
| Aromatoleum aromaticum EbN1 | 3 |
| arsenite-oxidizing bacterium NT-14 | 1 |
| Artemisia annua | 7 |
| Arthrobacter | 1 |
| Arthrobacter agilis | 1 |
| Arthrobacter aurescens TW17 | 1 |
| Arthrobacter citreus | 3 |
| Arthrobacter crystallopoietes | 3 |
| Arthrobacter globiformis | 8 |
| Arthrobacter globiformis KZT1 | 1 |
| Arthrobacter methylotrophus | 2 |
| Arthrobacter pascens | 1 |
| Arthrobacter protophormiae R4 | 1 |
| Arthrobacter protophormiae RKJ100 | 1 |
| Arthrobacter ramosus | 1 |
| Arthrobacter sp | 4 |
| Arthrobacter sp. 4-CB1 | 1 |
| Arthrobacter sp. 9759 | 1 |
| Arthrobacter sp. KI72 | 1 |
| Arthrobacter sp. KUJ8602 | 1 |
| Arthrobacter sp. Q36 | 1 |
| Arthrobacter sp. SLBN-53 | 1 |
| Arthrobacter sp. SU | 1 |
| Arthrobacter sp. TE1826 | 1 |
| Arthrobacter sp. TM1 | 1 |
| Arthrobacter sp. TMP-1 | 1 |
| Arthrobacter synephrinum | 1 |
| Arthroderma borellii | 1 |
| Arthroderma curreyi | 1 |
| Arthroderma quadrifidum | 1 |
| Arthrodermataceae | 1 |
| Arthrospira platensis | 4 |
| Asaccharobacter celatus AHU1763 | 1 |
| Asanoa ferruginea | 1 |
| Ascaris lumbricoides | 3 |
| Ascaris suum | 3 |
| Asclepias syriaca | 2 |
| Ascochyta rabiei | 1 |
| Ascosphaera | 1 |
| Ascosphaera apis | 1 |
| Ascosphaera asterophora | 1 |
| Ascosphaera atra | 1 |
| Ascosphaera major | 1 |
| Ascosphaera proliperda | 1 |
| Asparagus officinalis | 2 |
| Aspergillus | 1 |
| Aspergillus aculeatus | 3 |
| Aspergillus alliaceus | 1 |
| Aspergillus awamori | 2 |
| Aspergillus carneus | 1 |
| Aspergillus cejpii | 1 |
| Aspergillus clavatus | 1 |
| Aspergillus clavatus NRRL 1980 | 1 |
| Aspergillus fischeri | 3 |
| Aspergillus fischeri NRRL 181 | 1 |
| Aspergillus flavus | 8 |
| Aspergillus flavus NRRL3357 | 1 |
| Aspergillus fumigatus | 10 |
| Aspergillus itaconicus | 1 |
| Aspergillus japonicus | 2 |
| Aspergillus nidulans | 16 |
| Aspergillus niger | 19 |
| Aspergillus niger ATCC 1015 | 2 |
| Aspergillus oryzae | 6 |
| Aspergillus parasiticus | 5 |
| Aspergillus quadricinctus | 1 |
| Aspergillus rugulosus | 3 |
| Aspergillus sp. MF297-2 | 2 |
| Aspergillus stellatus | 2 |
| Aspergillus sydowii | 1 |
| Aspergillus terreus | 5 |
| Aspergillus terricola | 2 |
| Aspergillus tubingensis | 1 |
| Aspergillus versicolor | 3 |
| Astacus leptodactylus | 1 |
| Asterias rubens | 1 |
| Astragalus | 2 |
| Astragalus bisulcatus | 2 |
| Astragalus mongholicus | 2 |
| Atractylodes lancea | 1 |
| Atropa belladonna | 4 |
| Aurantimonas manganoxydans SI85-9A1 | 2 |
| Aureispira marina | 1 |
| Aureobasidium pullulans | 2 |
| Aureococcus anophagefferens | 1 |
| Auxenochlorella pyrenoidosa | 1 |
| Avena sativa | 6 |
| Avena strigosa | 7 |
| Aves | 3 |
| Azoarcus evansii | 5 |
| Azoarcus sp. EB1 | 1 |
| Azoarcus sp. PbN1 | 1 |
| Azoarcus sp. T | 2 |
| Azorhizobium caulinodans | 1 |
| Azospira oryzae | 1 |
| Azospira sp. KJ | 1 |
| Azospira sp. PCC | 1 |
| Azospirillum brasilense | 8 |
| Azospirillum lipoferum | 2 |
| Azospirillum sp. TTI | 1 |
| Azotobacter beijerinckii | 1 |
| Azotobacter chroococcum | 1 |
| Azotobacter vinelandii | 15 |
| Azotobacter vinelandii NBRC 102612 | 1 |
| Bacillariophyta | 1 |
| Bacillus alcalophilus | 2 |
| Bacillus amyloliquefaciens | 2 |
| Bacillus amyloliquefaciens 140N | 1 |
| Bacillus anthracis | 6 |
| Bacillus anthracis Sterne | 1 |
| Bacillus atrophaeus 1942 | 1 |
| Bacillus azotoformans | 1 |
| Bacillus badius | 2 |
| Bacillus bataviensis | 1 |
| Bacillus brevis Nagano | 1 |
| Bacillus cereus | 11 |
| Bacillus cereus ATCC 14579 | 1 |
| Bacillus cereus G9241 | 1 |
| Bacillus cereus PF-11 | 1 |
| Bacillus circulans | 6 |
| Bacillus clausii KSM-K16 | 1 |
| Bacillus coagulans | 2 |
| Bacillus fastidiosus | 1 |
| Bacillus firmus | 2 |
| Bacillus halodurans | 1 |
| Bacillus halodurans C-125 | 1 |
| Bacillus halotolerans | 2 |
| Bacillus lentus | 2 |
| Bacillus licheniformis | 7 |
| Bacillus megaterium | 12 |
| Bacillus methanolicus | 3 |
| Bacillus mycoides | 1 |
| Bacillus nealsonii | 1 |
| Bacillus niacini | 1 |
| Bacillus psychrosaccharolyticus | 2 |
| Bacillus pumilus | 5 |
| Bacillus pumilus WH4 | 1 |
| Bacillus racemilacticus | 2 |
| Bacillus sp. 8 | 1 |
| Bacillus sp. GL1 | 1 |
| Bacillus sp. HYS-1 | 1 |
| Bacillus sp. No. 230 | 1 |
| Bacillus sp. OxB-1 | 1 |
| Bacillus sp. PL-12 | 1 |
| Bacillus sp. RC607 | 1 |
| Bacillus sp. SG-1 | 1 |
| Bacillus stearothermophilus BR388 | 1 |
| Bacillus subtilis | 63 |
| Bacillus subtilis natto | 1 |
| Bacillus subtilis spizizenii ATCC 6633 | 1 |
| Bacillus subtilis spizizenii W23 | 2 |
| Bacillus subtilis subtilis 168 | 44 |
| Bacillus thuringiensis | 4 |
| Bacillus thuringiensis [] serovar konkukian str. 97-27 | 1 |
| Bacillus velezensis FZB42 | 1 |
| bacterium | 1 |
| bacterium enrichment culture clone N47 | 1 |
| Bacteroidales bacterium Barb6XT | 1 |
| Bacteroides | 1 |
| Bacteroides eggerthii | 4 |
| Bacteroides fragilis | 9 |
| Bacteroides fragilis ATCC 23745 | 1 |
| Bacteroides fragilis NCTC 9343 | 4 |
| Bacteroides helcogenes | 1 |
| Bacteroides ovatus | 4 |
| Bacteroides salanitronis | 1 |
| Bacteroides sp. DeMoss 69 | 1 |
| Bacteroides thetaiotaomicron | 9 |
| Bacteroides thetaiotaomicron VPI-5482 | 2 |
| Bacteroides vulgatus | 7 |
| Bacteroides vulgatus ATCC 8482 | 3 |
| Balansia obtecta | 1 |
| Barnadesia spinosa | 1 |
| Barnettozyma californica | 1 |
| Barnettozyma pratensis | 1 |
| Batis maritima | 1 |
| Beauveria bassiana | 2 |
| Beggiatoa | 1 |
| Bemisia tabaci | 1 |
| Berberis | 1 |
| Berberis beaniana | 1 |
| Berberis stolonifera | 2 |
| Berberis wilsoniae | 3 |
| Beta vulgaris | 2 |
| Beta vulgaris vulgaris | 2 |
| Betula | 1 |
| Betula platyphylla japonica | 2 |
| Betula pubescens | 1 |
| Bifidobacterium adolescentis | 2 |
| Bifidobacterium animalis lactis | 2 |
| Bifidobacterium bifidum | 2 |
| Bifidobacterium longum | 3 |
| Bifidobacterium longum SBT2928 | 2 |
| Bifidobacterium tissieri | 1 |
| Bilophila wadsworthia | 1 |
| Bilophila wadsworthia 3_1_6 | 1 |
| Bilophila wadsworthia RZATAU | 4 |
| Bixa orellana | 2 |
| Blaberus discoidalis | 1 |
| Blaberus giganteus | 1 |
| Blastochloris viridis | 4 |
| Blatta orientalis | 1 |
| Blautia hydrogenotrophica DSM 10507 | 1 |
| Blautia producta | 2 |
| Blautia producta K 2/25.1 | 1 |
| Blighia sapida | 1 |
| Bombyx mori | 4 |
| Borago officinalis | 1 |
| Bordetella bronchiseptica | 1 |
| Bordetella bronchiseptica RB50 | 1 |
| Bordetella parapertussis | 1 |
| Bordetella pertussis | 9 |
| Bordetella sp. 10d | 2 |
| Borreliella burgdorferi | 2 |
| Bos taurus | 24 |
| Botryococcus braunii | 2 |
| Botryococcus braunii BOT22 | 1 |
| Botryococcus braunii BOT88-2 | 1 |
| Botryococcus braunii race L | 1 |
| Botrytis cinerea | 4 |
| Brachybacterium conglomeratum | 1 |
| Brachymonas petroleovorans CHX | 1 |
| Bradyrhizobium diazoefficiens | 1 |
| Bradyrhizobium diazoefficiens USDA 110 | 1 |
| Bradyrhizobium elkanii | 3 |
| Bradyrhizobium japonicum | 13 |
| Bradyrhizobium sp. JS329 | 1 |
| Bradyrhizobium sp. RD5-C2 | 3 |
| Bradyrhizobium sp. SEMIA 6144 | 1 |
| Brassica juncea | 5 |
| Brassica napus | 18 |
| Brassica nigra | 1 |
| Brassica oleracea | 3 |
| Brassica oleracea botrytis | 2 |
| Brassica oleracea italica | 1 |
| Brassica rapa | 2 |
| Brevibacillus agri | 2 |
| Brevibacillus brevis S1 | 4 |
| Brevibacillus laterosporus | 1 |
| Brevibacterium | 1 |
| Brevibacterium epidermidis | 1 |
| Brevibacterium fuscum | 3 |
| Brevibacterium helvolum | 3 |
| Brevibacterium iodinum | 1 |
| Brevibacterium linens | 2 |
| Brevibacterium sp. DPO 1361 | 1 |
| Brevibacterium sterolicum | 1 |
| Brevundimonas aurantiaca | 1 |
| Brevundimonas diminuta | 1 |
| Brevundimonas sp. SD212 | 2 |
| Brevundimonas vesicularis | 2 |
| Brochothrix thermosphacta | 2 |
| Bromus inermis | 1 |
| Brucella abortus | 6 |
| Brucella melitensis | 5 |
| Bruguiera gymnorhiza | 2 |
| Burkholderia ambifaria AMMD | 1 |
| Burkholderia cenocepacia | 1 |
| Burkholderia cenocepacia J2315 | 3 |
| Burkholderia cepacia | 12 |
| Burkholderia cepacia 2CBS | 1 |
| Burkholderia cepacia complex | 1 |
| Burkholderia cepacia JS850 | 1 |
| Burkholderia cepacia R34 | 1 |
| Burkholderia gladioli | 2 |
| Burkholderia glumae | 3 |
| Burkholderia lata | 2 |
| Burkholderia mallei | 1 |
| Burkholderia plantarii | 2 |
| Burkholderia pseudomallei | 3 |
| Burkholderia pyrrocinia | 2 |
| Burkholderia sp. AK-5 | 1 |
| Burkholderia sp. DNT | 1 |
| Burkholderia sp. FA1 | 1 |
| Burkholderia sp. JB1 | 1 |
| Burkholderia sp. JS150 | 1 |
| Burkholderia sp. JS667 | 2 |
| Burkholderia sp. NK8 | 1 |
| Burkholderia sp. RASC | 3 |
| Burkholderia sp. WS | 2 |
| Burkholderia terrae KU-15 | 2 |
| Burkholderia thailandensis | 3 |
| Busycotypus canaliculatus | 1 |
| Butyrivibrio fibrisolvens | 1 |
| Byrsotria fumigata | 1 |
| Cadra cautella | 1 |
| Caenorhabditis elegans | 4 |
| Caldanaerobacter subterraneus tengcongensis | 3 |
| Caldicellulosiruptor saccharolyticus | 1 |
| Calendula officinalis | 2 |
| Camellia irrawadiensis | 2 |
| Camellia ptilophylla | 3 |
| Camellia sinensis | 11 |
| Camellia sinensis assamica | 3 |
| Camellia sinensis sinensis | 1 |
| Camellia taliensis | 1 |
| Camptotheca acuminata | 2 |
| Campylobacter coli | 3 |
| Campylobacter fetus | 1 |
| Campylobacter jejuni | 14 |
| Campylobacter jejuni jejuni 81-176 | 1 |
| Campylobacter jejuni jejuni 81116 | 2 |
| Campylobacter jejuni jejuni NCTC 11168 = ATCC 700819 | 3 |
| Canavalia ensiformis | 2 |
| Canavalia lineata | 2 |
| Candida albicans | 4 |
| Candida albicans SC5314 | 1 |
| Candida cariosilignicola | 1 |
| Candida cloacae | 1 |
| Candida entomophila | 1 |
| Candida freyschussii | 1 |
| Candida karawaiewii | 1 |
| Candida maltosa | 2 |
| Candida maltosa L4 | 1 |
| Candida methylica | 1 |
| Candida sequanensis | 1 |
| Candida silvanorum | 1 |
| Candida solani | 1 |
| Candida tropicalis | 2 |
| Candidatus Anammoxoglobus | 1 |
| Candidatus Arcobacter sulfidicus | 1 |
| Candidatus Brocadia anammoxidans | 1 |
| Candidatus Endobugula sertula | 1 |
| Candidatus Jettenia caeni | 1 |
| Candidatus Kuenenia stuttgartiensis | 1 |
| Candidatus Methylomirabilis oxyfera | 2 |
| Candidatus Nitrososphaera gargensis Ga9.2 | 2 |
| Candidatus Pelagibacter ubique | 1 |
| Candidatus Pelagibacter ubique HTCC1062 | 1 |
| Candidatus Scalindua brodae | 1 |
| Candidatus Scalindua wagneri | 1 |
| Candidatus Thiodictyon syntrophicum Cad16 | 1 |
| Canis lupus familiaris | 1 |
| Cannabis sativa | 5 |
| Cantharellus formosus | 1 |
| Capnocytophaga gingivalis | 2 |
| Capnocytophaga ochracea | 2 |
| Capnocytophaga sputigena | 2 |
| Capra hircus | 3 |
| Capsicum | 1 |
| Capsicum annuum | 11 |
| Capsicum baccatum | 1 |
| Capsicum chinense | 2 |
| Capsicum frutescens | 1 |
| Carapichea ipecacuanha | 1 |
| Carassius auratus | 1 |
| Carboxydothermus hydrogenoformans | 1 |
| Carcinus maenas | 1 |
| Carica papaya | 1 |
| Carthamus tinctorius | 8 |
| Carum carvi | 1 |
| Caryophyllaceae | 1 |
| Caryophyllales | 1 |
| Cassia coluteoides | 1 |
| Castellaniella defragrans | 2 |
| Castellaniella denitrificans | 2 |
| Catharanthus roseus | 30 |
| Caulobacter vibrioides | 1 |
| Caulobacter vibrioides CB15 | 3 |
| Caulobacter vibrioides NA1000 | 2 |
| Cavia porcellus | 8 |
| Cellana grata | 1 |
| Cellulomonas biazotea | 2 |
| Cellulomonas fimi | 1 |
| Cellulomonas flavigena | 1 |
| Cellulosimicrobium cellulans | 1 |
| Celosia cristata | 2 |
| Centaurium erythraea | 1 |
| Cephalocereus senilis | 1 |
| Cerastium arvense | 1 |
| Ceratodon purpureus | 1 |
| Cestrum elegans | 1 |
| Chaetomium globosum | 1 |
| Chamaecyparis obtusa | 1 |
| Chelatococcus asaccharovorans | 1 |
| Chelidonium majus | 1 |
| Chlamydia abortus | 2 |
| Chlamydia caviae | 2 |
| Chlamydia felis | 2 |
| Chlamydia muridarum | 2 |
| Chlamydia pneumoniae | 3 |
| Chlamydia psittaci | 1 |
| Chlamydia trachomatis | 9 |
| Chlamydia trachomatis D/UW-3/CX | 1 |
| Chlamydomonas | 1 |
| Chlamydomonas reinhardtii | 20 |
| Chlorella sp. (Roon 68) | 2 |
| Chlorobaculum limnaeum | 3 |
| Chlorobaculum tepidum | 13 |
| Chlorobaculum tepidum TLS | 2 |
| Chlorobaculum thiosulfatiphilum | 4 |
| Chlorobium | 1 |
| Chlorobium limicola | 6 |
| Chlorobium phaeobacteroides BS1 | 3 |
| Chlorobium phaeobacteroides DSM 266 | 3 |
| Chlorobium phaeovibrioides DSM 265 | 1 |
| Chloroflexus aggregans | 1 |
| Chloroflexus aurantiacus | 2 |
| Chloroflexus aurantiacus J-10-fl | 2 |
| Chlorogloeopsis fritschii | 1 |
| Chlorophyta | 1 |
| Chondromyces apiculatus | 1 |
| Chondrus crispus | 1 |
| Chromatium | 1 |
| chromatium vinosum strain D | 1 |
| Chromobacterium violaceum | 7 |
| Chromobacterium violaceum ATCC 12472 | 1 |
| Chromohalobacter beijerinckii | 3 |
| Chromohalobacter salexigens | 3 |
| Chromohalobacter salexigens DSM 3043 | 4 |
| Chrysanthemum x morifolium | 1 |
| Chrysiogenes arsenatis | 1 |
| Chrysopa | 1 |
| Chrysosplenium americanum | 4 |
| Chrysosporium keratinophilum | 1 |
| Chrysosporium lucknowense | 1 |
| Chrysosporum ovalisporum | 1 |
| Cicer arietinum | 14 |
| Cichorium intybus | 4 |
| Cinchona | 1 |
| Cinchona calisaya | 1 |
| Cinchona macrocalyx | 1 |
| Cinchona mutisii | 1 |
| Cinchona officinalis | 1 |
| Cinchona pitayensis | 1 |
| Cinchona pubescens | 1 |
| Cinnamomum tenuipile | 1 |
| Cistus creticus | 2 |
| Citeromyces matritensis | 1 |
| Citrobacter amalonaticus | 2 |
| Citrobacter freundii | 10 |
| Citrobacter intermedius | 1 |
| Citrobacter sp. S-77 | 1 |
| Citrullus lanatus vulgaris | 1 |
| Citrus aurantium | 2 |
| Citrus clementina | 1 |
| Citrus hanaju | 1 |
| Citrus japonica | 2 |
| Citrus junos | 1 |
| Citrus maxima | 4 |
| Citrus sinensis | 5 |
| Citrus trifoliata | 1 |
| Citrus unshiu | 3 |
| Citrus x microcarpa | 1 |
| Citrus x paradisi | 5 |
| Cladophora | 1 |
| Cladosporium cladosporioides | 1 |
| Clarkia breweri | 6 |
| Clavibacter michiganensis | 3 |
| Clavibacter michiganensis insidiosus | 3 |
| Clavibacter michiganensis michiganensis | 1 |
| Clavibacter michiganensis nebraskensis | 3 |
| Clavibacter michiganensis sepedonicus | 3 |
| Claviceps fusiformis | 1 |
| Claviceps purpurea | 2 |
| Clavispora fructus | 1 |
| Clavispora lusitaniae | 1 |
| Cleretum bellidiforme | 1 |
| Clitoria ternatea | 2 |
| Clostridioides difficile | 4 |
| Clostridioides difficile 630 | 1 |
| Clostridioides difficile ATCC 9689 = DSM 1296 | 1 |
| Clostridioides difficile CD196 | 1 |
| Clostridium | 3 |
| Clostridium aceticum | 1 |
| Clostridium acetobutylicum | 15 |
| Clostridium acetobutylicum ATCC 824 | 10 |
| Clostridium aminobutyricum | 1 |
| Clostridium beijerinckii | 7 |
| Clostridium bifermentans DPH-1 | 1 |
| Clostridium botulinum | 8 |
| Clostridium botulinum A str. ATCC 19397 | 2 |
| Clostridium butyricum | 3 |
| Clostridium cellulovorans | 2 |
| Clostridium cochlearium | 2 |
| Clostridium colicanis | 1 |
| Clostridium cylindrosporum | 2 |
| Clostridium formicaceticum | 4 |
| Clostridium innocuum D1144/3 | 1 |
| Clostridium kluyveri | 5 |
| Clostridium magnum | 1 |
| Clostridium malenominatum | 1 |
| Clostridium paraputrificum D 762-06 | 1 |
| Clostridium pasteurianum | 10 |
| Clostridium peptidivorans | 1 |
| Clostridium perfringens | 5 |
| Clostridium perfringens 13 | 2 |
| Clostridium perfringens A99 | 1 |
| Clostridium saccharobutylicum | 4 |
| Clostridium sardiniense | 1 |
| Clostridium SB4 | 1 |
| Clostridium sp. ATCC 29733 | 1 |
| Clostridium sp. TO-931 | 1 |
| Clostridium sporogenes | 11 |
| Clostridium subterminale | 1 |
| Clostridium tetani | 1 |
| Clostridium tetanomorphum | 4 |
| Clostridium ventriculi | 1 |
| Coccinella | 1 |
| Coffea abeokutae | 1 |
| Coffea arabica | 4 |
| Coffea canephora | 2 |
| Coffea eugenioides | 1 |
| Coffea liberica | 1 |
| Coffea liberica dewevrei | 1 |
| Coix lacryma-jobi | 2 |
| Colchicum autumnale | 1 |
| Collimonas sp. CT | 1 |
| Collinsella tanakaei | 1 |
| Colwellia psychrerythraea 34H | 1 |
| Comamonas sp. E6 | 1 |
| Comamonas sp. JS765 | 3 |
| Comamonas testosteroni | 8 |
| Comamonas testosteroni 63 | 1 |
| Comamonas testosteroni CNB-1 | 2 |
| Comamonas testosteroni JH5 | 1 |
| Comamonas testosteroni KF-1 | 1 |
| Comamonas testosteroni T-2 | 3 |
| Comamonas testosteroni TA441 | 2 |
| Coniochaeta ligniaria | 1 |
| Conium maculatum | 1 |
| Consolida orientalis | 1 |
| Coptis chinensis | 2 |
| Coptis japonica | 6 |
| Coptis japonica dissecta | 1 |
| Coptis teeta | 1 |
| Coraliomargarita akajimensis DSM 45221 | 1 |
| Corallococcus coralloides | 2 |
| Corbicula japonica | 1 |
| Coreopsis grandiflora | 2 |
| Coriandrum sativum | 1 |
| Corydalis cava | 1 |
| Corydalis saxicola | 1 |
| Corydalis vaginans | 2 |
| Corynebacterium ammoniagenes | 1 |
| Corynebacterium bovis | 1 |
| Corynebacterium callunae | 1 |
| Corynebacterium diphtheriae | 6 |
| Corynebacterium flavescens | 3 |
| Corynebacterium glutamicum | 21 |
| Corynebacterium glutamicum ATCC 13032 | 14 |
| Corynebacterium glutamicum R | 2 |
| Corynebacterium kutscheri | 1 |
| Corynebacterium matruchotii | 1 |
| Corynebacterium nephridii | 1 |
| Corynebacterium pseudotuberculosis | 1 |
| Corynebacterium renale | 1 |
| Corynebacterium sp | 2 |
| Corynebacterium sp. B6 | 1 |
| Corynebacterium sp. SHS 0007 | 1 |
| Corynebacterium sp. strain SY1 | 1 |
| Corynebacterium stationis | 1 |
| Corynebacterium ulcerans | 1 |
| Corynebacterium variabile | 1 |
| Corynebacterium xerosis | 1 |
| Crambe hispanica abyssinica | 1 |
| Crassostrea gigas | 3 |
| Crepis alpina | 1 |
| Crepis palaestina | 1 |
| Crithidia fasciculata | 3 |
| Crocosphaera subtropica ATCC 51142 | 3 |
| Crocus sativus | 3 |
| Croton | 1 |
| Croton linearis | 1 |
| Croton stellatopilosus | 2 |
| Croton sublyratus | 1 |
| Crypthecodinium cohnii | 1 |
| Cryptobacterium sp. CAG:338 | 1 |
| Cryptococcus albidus IFO 0939 | 1 |
| Cryptomeria japonica | 2 |
| Cryptosporidium parvum | 2 |
| Ctenomyces serratus | 1 |
| Cucumis melo | 5 |
| Cucumis sativus | 17 |
| Cucurbita maxima | 4 |
| Cucurbita pepo | 1 |
| Cucurbita pepo Early Prolific Straightneck | 1 |
| Cucurbita pepo medullosa | 1 |
| Cuphea wrightii | 1 |
| Cupressus | 1 |
| Cupriavidus basilensis | 2 |
| Cupriavidus metallidurans | 1 |
| Cupriavidus metallidurans CH34 | 4 |
| Cupriavidus nantongensis | 2 |
| Cupriavidus necator | 17 |
| Cupriavidus necator H16 | 9 |
| Cupriavidus necator N-1 | 1 |
| Cupriavidus oxalaticus | 1 |
| Cupriavidus pinatubonensis JMP134 | 11 |
| Cupriavidus sp. DT-1 | 1 |
| Cupriavidus sp. PS12 | 15 |
| Cupriavidus sp. WS | 1 |
| Curcuma longa | 2 |
| Curtobacterium albidum | 3 |
| Curtobacterium citreum | 3 |
| Curtobacterium flaccumfaciens | 4 |
| Curtobacterium luteum | 3 |
| Cutaneotrichosporon cutaneum | 4 |
| Cutaneotrichosporon moniliiforme | 1 |
| Cutibacterium acnes | 5 |
| Cyanidioschyzon merolae strain 10D | 1 |
| Cyanidium caldarium | 3 |
| Cyanobium gracile PCC 6307 | 1 |
| Cyanothece sp. PCC 7425 | 2 |
| Cyberlindnera jadinii | 6 |
| Cyberlindnera mrakii | 2 |
| Cyberlindnera saturnus | 2 |
| Cyclotella meneghiniana | 2 |
| Cydia pomonella | 1 |
| Cylindrocarpon didymum | 1 |
| Cylindrospermopsis raciborskii AWT205 | 1 |
| Cymbopogon flexuosus | 1 |
| Cymbopogon martinii | 1 |
| Cyperus iria | 1 |
| Cystobacter fuscus | 1 |
| Cytophaga hutchinsonii | 2 |
| Dahlia pinnata | 5 |
| Dalbergia cochinchinensis | 1 |
| Dalbergia nigrescens | 1 |
| Danio rerio | 3 |
| Daphne odora | 2 |
| Datura inoxia | 1 |
| Datura stramonium | 4 |
| Daucus carota | 9 |
| Davallia trichomanoides | 1 |
| Debaryomyces hansenii hansenii CBS767 | 1 |
| Dechloromonas agitata | 1 |
| Dechloromonas aromatica | 2 |
| Dechloromonas sp. MissR | 1 |
| Dechloromonas sp. PC1 | 1 |
| Dehalobacter restrictus | 1 |
| Dehalococcoides mccartyi | 2 |
| Dehalococcoides mccartyi VS | 1 |
| Deinococcus radiodurans | 11 |
| Deinococcus radiodurans R1 | 1 |
| Deinococcus radiophilus | 1 |
| Delftia acidovorans | 18 |
| Delftia acidovorans 7N | 1 |
| Delftia sp. AN3 | 1 |
| Delftia tsuruhatensis AD9 | 1 |
| Delphinium grandiflorum | 5 |
| delta proteobacterium N47 | 1 |
| Dermatophilus congolensis | 3 |
| Derris elliptica | 1 |
| Desmodium uncinatum | 2 |
| Desmonostoc muscorum | 2 |
| Desulfallas geothermicus | 1 |
| Desulfallas gibsoniae DSM 7213 | 1 |
| Desulfatibacillum alkenivorans AK-01 | 1 |
| Desulfitobacterium chlororespirans | 1 |
| Desulfitobacterium dehalogenans | 1 |
| Desulfitobacterium hafniense | 2 |
| Desulfitobacterium hafniense DCB-2 | 1 |
| Desulfitobacterium hafniense Y51 | 1 |
| Desulfobacter hydrogenophilus | 1 |
| Desulfobacterium autotrophicum | 3 |
| Desulfobacterium niacini | 1 |
| Desulfobacterium sp. PM4 | 1 |
| Desulfobacterium vacuolatum | 1 |
| Desulfobulbus | 1 |
| Desulfobulbus propionicus | 3 |
| Desulfocapsa | 1 |
| Desulfocapsa sulfexigens | 2 |
| Desulfocapsa sulfexigens DSM 10523 | 1 |
| Desulfocapsa thiozymogenes | 1 |
| Desulfococcus biacutus | 1 |
| Desulfofarcimen acetoxidans DSM 771 | 1 |
| Desulfofundulus australicus | 1 |
| Desulfofundulus kuznetsovii | 1 |
| Desulfofundulus kuznetsovii DSM 6115 | 1 |
| Desulfomicrobium baculatum | 1 |
| Desulfonispora thiosulfatigenes GKNTAU | 2 |
| Desulfosarcina cetonica | 1 |
| Desulfosporosinus acidiphilus | 1 |
| Desulfosporosinus acidiphilus SJ4 | 1 |
| Desulfosporosinus orientis DSM 765 | 1 |
| Desulfosporosinus youngiae | 1 |
| Desulfotomaculum nigrificans | 6 |
| Desulfovibrio alaskensis G20 | 2 |
| Desulfovibrio desulfuricans | 9 |
| Desulfovibrio desulfuricans DSM 642 | 1 |
| Desulfovibrio fairfieldensis | 1 |
| Desulfovibrio fructosivorans | 1 |
| Desulfovibrio gigas | 6 |
| Desulfovibrio multispirans | 2 |
| Desulfovibrio piger | 1 |
| Desulfovibrio sulfodismutans | 2 |
| Desulfovibrio termitidis | 1 |
| Desulfovibrio vulgaris | 7 |
| Desulfovibrio vulgaris Hildenborough | 1 |
| Desulfurivibrio alkaliphilus AHT 2 | 1 |
| Desulfurobacterium thermolithotrophum | 1 |
| Desulfurococcus mucosus | 1 |
| Desulfuromonas acetexigens | 1 |
| Desulfuromonas acetoxidans | 2 |
| Desulfuromonas acetoxidans DSM 684 | 1 |
| Diacrisia sannio | 1 |
| Dianthus caryophyllus | 12 |
| Diaporthe amygdali | 3 |
| Dickeya chrysanthemi | 5 |
| Dickeya dadantii | 1 |
| Dickeya dadantii 3937 | 3 |
| Dicranum scoparium | 1 |
| Dictyocaulus viviparus | 1 |
| Dictyostelium discoideum | 4 |
| Dietzia sp. CQ4 | 1 |
| Digenea simplex | 1 |
| Digitalis grandiflora | 1 |
| Digitalis lanata | 2 |
| Digitalis purpurea | 2 |
| Dimorphandra mollis | 1 |
| Dimorphotheca sinuata | 1 |
| Dinoroseobacter shibae DFL 12 = DSM 16493 | 1 |
| Diospyros kaki | 1 |
| Diploptera punctata | 1 |
| Diutina catenulata | 1 |
| Diutina rugosa | 1 |
| Dolichandra unguis-cati | 1 |
| Domibacillus aminovorans | 2 |
| Dorea longicatena | 1 |
| Doryteuthis pealeii | 1 |
| Drosophila <flies,genus> | 1 |
| Drosophila melanogaster | 12 |
| Dryopteris crassirhizoma | 1 |
| DSMP-degrading bacterium LFR | 1 |
| Duganella sp. B2 | 1 |
| Dugesia japonica | 1 |
| Ectocarpus siliculosus | 2 |
| Ectothiorhodospira haloalkaliphila | 1 |
| Ectothiorhodospira shaposhnikovii | 1 |
| Edwardsiella tarda | 2 |
| Eggerthella lenta | 1 |
| Eggerthella lenta DSM 2243 | 3 |
| Eimeria | 1 |
| Eimeria tenella | 1 |
| Eisenibacter elegans | 4 |
| Emiliania huxleyi | 2 |
| Endocladia muricata | 1 |
| endosymbiont of Riftia pachyptila | 1 |
| Enhygromyxa salina | 2 |
| Ensifer adhaerens | 1 |
| Entamoeba histolytica | 3 |
| Enterobacter asburiae | 1 |
| Enterobacter cloacae | 2 |
| Enterobacter hormaechei | 1 |
| Enterococcus casseliflavus | 2 |
| Enterococcus faecalis | 16 |
| Enterococcus faecium | 3 |
| Enterococcus gallinarum | 1 |
| Enterococcus raffinosus | 1 |
| Ephedra gerardiana | 1 |
| Epichloe festucae | 3 |
| Epichloe hybrida | 1 |
| Equisetum arvense | 2 |
| Erwinia amylovora | 2 |
| Erwinia chrysanthemi EC16 | 2 |
| Erwinia sp | 1 |
| Erysiphaceae | 1 |
| Erythrobacter longus | 1 |
| Erythrobacter sp. SD-21 | 1 |
| Erythroxylum coca | 1 |
| Escherichia coli | 2 |
| Escherichia coli B | 7 |
| Escherichia coli B SPAO | 1 |
| Escherichia coli BL21(DE3) | 1 |
| Escherichia coli C | 4 |
| Escherichia coli CFT073 | 2 |
| Escherichia coli Crookes | 1 |
| Escherichia coli J53-1 | 1 |
| Escherichia coli K-12 | 2 |
| Escherichia coli K-12 substr. DH10B | 1 |
| Escherichia coli K-12 substr. MG1655 | 358 |
| Escherichia coli K-12 substr. MG1656 | 1 |
| Escherichia coli K1 | 1 |
| Escherichia coli K4 | 1 |
| Escherichia coli O104 | 1 |
| Escherichia coli O108 | 1 |
| Escherichia coli O111:NM | 1 |
| Escherichia coli O113 | 1 |
| Escherichia coli O157:H7 | 4 |
| Escherichia coli O26 | 1 |
| Escherichia coli O44:K74 | 1 |
| Escherichia coli O5 | 1 |
| Escherichia coli O52 | 1 |
| Escherichia coli O7:K1 | 1 |
| Escherichia coli O86 | 1 |
| Escherichia coli O86:B7 | 1 |
| Escherichia coli O98 | 1 |
| Escherichia coli O9a | 1 |
| Escherichia coli UTI89 | 1 |
| Escherichia coli W | 7 |
| Eschscholzia californica | 4 |
| Estigmene acrea | 1 |
| Eubacterium barkeri | 1 |
| Eubacterium limosum | 2 |
| Eubacterium oxidoreducens G41 | 1 |
| Eucalyptus piperita | 1 |
| Eudoraea adriatica | 1 |
| Euglena | 1 |
| Euglena gracilis | 16 |
| Eukaryota | 1 |
| Euonymus alatus | 1 |
| Euphorbia lagascae | 1 |
| Eustoma exaltatum russellianum | 2 |
| Exiguobacterium acetylicum | 2 |
| Fagopyrum esculentum | 8 |
| Fagopyrum tataricum | 3 |
| Fagus crenata | 1 |
| Fasciola hepatica | 3 |
| Faxonius limosus | 1 |
| Felis catus | 2 |
| Fervidobacterium nodosum | 1 |
| Fischerella ambigua UTEX 1903 | 2 |
| Fischerella muscicola UTEX 1829 | 1 |
| Fischerella sp. ATCC 43239 | 1 |
| Fischerella sp. SAG 46.79 | 1 |
| Flammulina velutipes | 3 |
| Flaveria bidentis | 2 |
| Flaveria chlorifolia | 1 |
| Flavobacterium johnsoniae | 1 |
| Flavobacterium johnsoniae UW101 | 1 |
| Fluoribacter bozemanae | 1 |
| Fluviicola taffensis | 1 |
| Foeniculum vulgare | 5 |
| Foeniculum vulgare dulce | 1 |
| Fomitopsis palustris | 1 |
| Forsythia koreana | 1 |
| Forsythia x intermedia | 1 |
| Fragaria | 2 |
| Fragaria x ananassa | 2 |
| Francisella tularensis novicida U112 | 1 |
| Francisella tularensis tularensis SCHU S4 | 1 |
| Frateuria sp. ANA-18 | 1 |
| Freesia hybrid cultivar | 1 |
| Fucus gardneri | 1 |
| Fulvimarina pelagi HTCC2506 | 1 |
| Fusarium anguioides | 1 |
| Fusarium Caucasicum | 1 |
| Fusarium fujikuroi | 10 |
| Fusarium graminearum | 4 |
| Fusarium graminearum 70E1 | 1 |
| Fusarium graminearum 79A1 | 1 |
| Fusarium graminearum 88-1 | 1 |
| Fusarium graminearum GZ3639 | 1 |
| Fusarium heterosporum | 2 |
| Fusarium incarnatum | 1 |
| Fusarium lateritium | 1 |
| Fusarium oxysporum | 6 |
| Fusarium oxysporum sp. lycopersici | 1 |
| Fusarium phaseoli | 1 |
| Fusarium solani | 3 |
| Fusarium sporotrichioides | 2 |
| Fusarium verticillioides | 2 |
| Fusobacterium nucleatum | 4 |
| Fusobacterium varium | 1 |
| Galanthus elwesii | 1 |
| Galium mollugo | 2 |
| Galleria mellonella | 2 |
| Gallus gallus | 11 |
| gamma proteobacterium HTCC2207 | 1 |
| Gardenia jasminoides | 2 |
| Gelatoporia subvermispora | 1 |
| Geminocystis herdmanii PCC 6308 | 2 |
| Gemmata obscuriglobus | 3 |
| Gemmata sp. Wa1-1 | 1 |
| Gentiana straminea | 2 |
| Gentiana triflora | 2 |
| Geobacillus kaustophilus | 1 |
| Geobacillus stearothermophilus | 16 |
| Geobacillus thermodenitrificans NG80-2 | 1 |
| Geobacter lovleyi SZ | 1 |
| Geobacter sulfurreducens | 1 |
| Geobacter sulfurreducens PCA | 1 |
| Geotrichum sp. M128 | 1 |
| Gerbera hybrid cultivar | 2 |
| Giardia intestinalis | 3 |
| Gimesia maris DSM 8797 | 1 |
| Ginkgo biloba | 6 |
| Glandularia x hybrida | 2 |
| Glebionis segetum | 2 |
| Gloeobacter violaceus | 6 |
| Gloeobacter violaceus PCC 7421 | 2 |
| Gluconobacter | 1 |
| Gluconobacter albidus | 2 |
| Gluconobacter cerinus | 2 |
| Gluconobacter oxydans | 7 |
| Gluconobacter oxydans IFO 3255 | 1 |
| Gluconobacter oxydans UV10 | 1 |
| Glutamicibacter nicotianae | 2 |
| Glutamicibacter protophormiae | 3 |
| Glycine max | 65 |
| Glycyrrhiza echinata | 9 |
| Glycyrrhiza glabra | 8 |
| Glycyrrhiza uralensis | 1 |
| Gordonia amarae | 1 |
| Gordonia bronchialis | 3 |
| Gordonia polyisoprenivorans | 1 |
| Gordonia rubripertincta | 5 |
| Gordonia sp. TY-5 | 1 |
| Gordonia terrae | 3 |
| Gordonia westfalica | 1 |
| Gossypium arboreum | 3 |
| Gossypium barbadense | 3 |
| Gossypium hirsutum | 4 |
| Gottschalkia acidurici | 2 |
| Gottschalkia purinilytica | 2 |
| Gracilariopsis lemaneiformis | 1 |
| Gracilariopsis longissima | 1 |
| Gram-negative bacterium ASV2 | 1 |
| Graphiola phoenicis | 1 |
| Grifola frondosa | 1 |
| Guatteria blepharophylla | 1 |
| Guatteria friesiana | 1 |
| Guatteria hispida | 1 |
| Gymnoascus demonbreunii | 1 |
| Gypsophila vaccaria | 1 |
| Gyrinops | 1 |
| Haematococcus lacustris | 1 |
| Haemonchus contortus | 1 |
| Haemophilus influenzae | 7 |
| Haemophilus influenzae Rd KW20 | 8 |
| Haemophilus parainfluenzae | 2 |
| Halalkalicoccus | 1 |
| Haliangium ochraceum | 1 |
| Halichondria japonica | 1 |
| Haliotis tuberculata lamellosa | 1 |
| Haloarcula | 1 |
| Haloarcula japonica | 1 |
| Haloarcula marismortui | 6 |
| Halobacteria | 2 |
| Halobacterium salinarum | 11 |
| Halobacterium salinarum NRC-1 | 2 |
| Halobacterium sp. JP-6 | 1 |
| Halobacterium sp. NCIMB 763 | 1 |
| Halococcus morrhuae | 2 |
| Halococcus saccharolyticus | 3 |
| Halodesulfovibrio aestuarii DSM 10141 | 1 |
| Haloferax | 1 |
| Haloferax mediterranei | 4 |
| Haloferax sp. D1227 | 1 |
| Haloferax volcanii | 16 |
| Halomicrobium | 1 |
| Halomonas elongata | 2 |
| Halomonas elongata DSM 2581 | 2 |
| Halomonas halmophila | 2 |
| Halomonas halodenitrificans | 2 |
| Halomonas sp. HTNK1 | 1 |
| Halorhodospira abdelmalekii | 1 |
| Halorhodospira halochloris | 3 |
| Halorhodospira halophila | 2 |
| Halorubrum lacusprofundi | 1 |
| Halorubrum saccharovorum | 5 |
| Halorubrum trapanicum | 2 |
| Haloterrigena | 1 |
| Hapsidospora irregularis | 2 |
| Hathewaya limosa | 1 |
| Hedera helix | 1 |
| Hedychium | 1 |
| Helianthus annuus | 1 |
| Helianthus tuberosus | 2 |
| Helicobacter bizzozeronii CIII-1 | 1 |
| Helicobacter pylori | 10 |
| Helicobacter pylori 26695 | 9 |
| Helicobacter pylori DMS 6709 | 1 |
| Helicobacter pylori SS1 | 1 |
| Helicoverpa armigera | 1 |
| Heliobacterium modesticaldum Ice1 | 1 |
| Herbaspirillum autotrophicum | 1 |
| Herbaspirillum huttiense strain NRRL B-12228 | 2 |
| Herbaspirillum seropedicae | 1 |
| Herminiimonas arsenicoxydans | 1 |
| Hevea brasiliensis | 6 |
| Hippophae rhamnoides | 1 |
| Homo sapiens | 319 |
| Hordeum lechleri | 1 |
| Hordeum vulgare | 28 |
| Hordeum vulgare vulgare | 1 |
| Hormoscilla spongeliae SP12 | 2 |
| human intestinal bacterium SNU-Julong732 | 1 |
| Humulus lupulus | 4 |
| Hungateiclostridium cellulolyticum | 2 |
| Hungateiclostridium thermocellum | 2 |
| Hungateiclostridium thermocellum ATCC 27405 | 4 |
| Hydrangea macrophylla | 1 |
| Hydrogenibacillus schlegelii | 1 |
| Hydrogenobacter thermophilus | 2 |
| Hydrogenophaga flava | 1 |
| Hydrogenophaga flava ENV735 | 1 |
| Hydrogenophaga intermedia | 1 |
| Hydrogenophaga palleronii | 1 |
| Hydrogenophaga palleronii JS863 | 1 |
| Hydrogenophaga pseudoflava | 1 |
| Hydrogenophilus thermoluteolus | 1 |
| Hyoscyamus albus | 2 |
| Hyoscyamus muticus | 1 |
| Hyoscyamus niger | 3 |
| Hypericum androsaemum | 3 |
| Hypericum calycinum | 2 |
| Hypericum perforatum | 3 |
| Hyperthermus butylicus | 2 |
| Hyphomicrobium denitrificans WU-K217 | 1 |
| Hyphomicrobium methylovorum GM2 | 2 |
| Hyphomicrobium sp. EG | 2 |
| Hyphomicrobium sp. S | 2 |
| Hyphomicrobium sulfonivorans | 3 |
| Hyphomicrobium zavarzinii ZV580 | 4 |
| Hyphopichia burtonii | 1 |
| Hyphopichia homilentoma | 1 |
| Ideonella dechloratans | 1 |
| Ideonella sakaiensis | 2 |
| Ignicoccus | 1 |
| Ignicoccus hospitalis | 2 |
| Impatiens balsamina | 2 |
| Ipomoea batatas | 6 |
| Ipomoea nil | 3 |
| Ipomoea purpurea | 1 |
| Ips confusus | 1 |
| Ips paraconfusus | 1 |
| Ips pini | 1 |
| Isatis tinctoria | 1 |
| Isochrysis galbana | 3 |
| Jacquinia angustifolia | 1 |
| Janthinobacterium lividum | 1 |
| Jasminum grandiflorum | 1 |
| Jeotgalicoccus sp. ATCC 8456 | 1 |
| Jonesia denitrificans | 3 |
| Juglans regia | 3 |
| Kalanchoe daigremontiana | 1 |
| Kandelia candel | 3 |
| Keratinophyton hispanicum | 1 |
| Keratinophyton saturnoideum | 1 |
| Keratinophyton terreum | 1 |
| Ketogulonicigenium vulgare | 1 |
| Ketogulonicigenium vulgare DSM 4025 | 1 |
| Kitasatospora aureofaciens | 5 |
| Kitasatospora griseola MF730-N6 MF730-N6 | 1 |
| Kitasatospora phosalacinea | 1 |
| Klebsiella aerogenes | 27 |
| Klebsiella michiganensis M5al | 2 |
| Klebsiella oxytoca | 5 |
| Klebsiella oxytoca TauN1 | 2 |
| Klebsiella pneumoniae | 28 |
| Klebsiella pneumoniae O3 | 1 |
| Klebsiella pneumoniae pneumoniae MGH 78578 | 1 |
| Kluyveromyces lactis | 1 |
| Kluyveromyces marxianus | 1 |
| Kocuria rhizophila | 1 |
| Kocuria rosea | 2 |
| Kocuria varians | 1 |
| Komagataeibacter xylinus | 3 |
| Komagataella pastoris | 3 |
| Komagataella phaffii GS115 | 1 |
| Kregervanrija fluxuum | 1 |
| Kribbella flavida | 1 |
| Kuraishia capsulata | 1 |
| Labrenzia aggregata | 1 |
| Labrenzia aggregata IAM 12614 | 1 |
| Lachancea kluyveri | 2 |
| Lachnospiraceae bacterium | 1 |
| Lachnospiraceae bacterium 19gly4 | 1 |
| Lactobacillaceae | 1 |
| Lactobacillus brevis | 8 |
| Lactobacillus buchneri | 2 |
| Lactobacillus casei | 11 |
| Lactobacillus fermentum | 2 |
| Lactobacillus helveticus | 3 |
| Lactobacillus hilgardii | 1 |
| Lactobacillus mali | 4 |
| Lactobacillus paraplantarum | 1 |
| Lactobacillus plantarum | 9 |
| Lactobacillus reuteri | 2 |
| Lactobacillus rhamnosus GG | 1 |
| Lactobacillus salivarius | 1 |
| Lactobacillus sanfranciscensis | 1 |
| Lactobacillus sp. 30A | 1 |
| Lactococcus garvieae 20-92 | 1 |
| Lactococcus lactis | 18 |
| Lactococcus lactis cremoris | 5 |
| Lactococcus lactis lactis | 2 |
| Lactococcus lactis lactis bv. diacetylactis | 2 |
| Lactuca sativa | 1 |
| Lactuca sativa romaine | 8 |
| Laminaria digitata | 1 |
| Lamium galeobdolon | 1 |
| Lampranthus sociorum | 1 |
| Lathyrus odoratus | 1 |
| Lathyrus sativus | 1 |
| Lathyrus tingitanus | 1 |
| Lavandula angustifolia | 2 |
| Lawsonia inermis | 1 |
| Legionella pneumophila | 3 |
| Legionella pneumophila pneumophila Philadelphia 1 | 1 |
| Leifsonia aquatica | 4 |
| Leishmania braziliensis | 1 |
| Leishmania donovani | 1 |
| Leishmania donovani species complex | 1 |
| Leishmania infantum | 1 |
| Leishmania mexicana | 1 |
| Leishmania mexicana species complex | 1 |
| Leishmania tarentolae | 1 |
| Leishmania tropica species complex | 1 |
| Lemna aequinoctialis | 1 |
| Lemna minor | 1 |
| Lens culinaris | 2 |
| Lentinus sajor-caju | 1 |
| Lentzea aerocolonigenes | 1 |
| Lentzea albida | 1 |
| Lepidium sativum | 2 |
| Leptolyngbya boryana | 1 |
| Leptospira biflexa serovar Patoc | 1 |
| Leptospira borgpetersenii | 2 |
| Leptospira interrogans | 5 |
| Leptospira interrogans serovar Bataviae | 2 |
| Leptospira interrogans serovar Lai str. 56601 | 2 |
| Leptospira meyeri | 1 |
| Leptothrix discophora strain SS-1 | 1 |
| Leucaena leucocephala | 2 |
| Leuconostoc lactis | 3 |
| Leuconostoc mesenteroides | 3 |
| Leuconostoc mesenteroides cremoris | 5 |
| Leuconostoc mesenteroides dextranicum | 1 |
| Lilium lancifolium | 1 |
| Lilium longiflorum | 1 |
| Limnanthes alba | 3 |
| Limnanthes douglasii | 3 |
| Limonium latifolium | 3 |
| Lingulodinium polyedra | 1 |
| Linum | 1 |
| Linum flavum | 3 |
| Linum nodiflorum | 3 |
| Linum perenne | 2 |
| Linum usitatissimum | 9 |
| Lipomyces starkeyi | 1 |
| Listeria grayi | 2 |
| Listeria innocua | 2 |
| Listeria monocytogenes | 2 |
| Litchi chinensis | 1 |
| Lithospermum erythrorhizon | 5 |
| Littorina littorea | 1 |
| Locusta migratoria | 1 |
| Lophophyton gallinae | 1 |
| Lotus corniculatus | 4 |
| Lotus japonicus | 10 |
| Luciola mingrelica | 1 |
| Luffa aegyptiaca | 1 |
| Lunaria annua | 1 |
| Lupinus albus | 5 |
| Lupinus angustifolius | 4 |
| Lupinus luteus | 11 |
| Lupinus polyphyllus | 1 |
| Lycopersicon hirsutum glabratum | 3 |
| Lygodium circinatum | 1 |
| Lymnaea stagnalis | 1 |
| Lyngbya majuscula | 1 |
| Lysinibacillus sphaericus | 5 |
| Lysobacter dokdonensis | 1 |
| Macaca fuscata | 1 |
| Macaca mulatta | 1 |
| Magnetococcus | 1 |
| Magnetospirillum | 1 |
| Magnolia | 1 |
| Magnolia grandiflora | 2 |
| Magnolia obovata | 1 |
| Malonomonas rubra | 1 |
| Malus domestica | 10 |
| Malus domestica Golden Delicious | 1 |
| Malus domestica Holsteiner Cox | 1 |
| Malus hupehensis | 1 |
| Malus pumila | 1 |
| Malus sp | 1 |
| Mammalia | 15 |
| Manduca sexta | 3 |
| Mangifera indica | 1 |
| Manihot esculenta | 4 |
| Marchantia polymorpha | 1 |
| Maricaulis maris MCS10 | 1 |
| Marichromatium gracile | 1 |
| Marichromatium purpuratum | 1 |
| Marinobacter hydrocarbonoclasticus | 1 |
| Marinobacter hydrocarbonoclasticus VT8 | 1 |
| Marinomonas mediterranea MMB-1 | 4 |
| Marinomonas sp. MED121 | 2 |
| Marinomonas sp. MWYL1 | 2 |
| Marinosulfonomonas methylotropha | 1 |
| Maritimibacter alkaliphilus HTCC2654 | 1 |
| Marphysa sanguinea | 1 |
| Mastigocladus laminosus | 2 |
| Matthiola incana | 4 |
| Medicago sativa | 13 |
| Medicago truncatula | 18 |
| Megasphaera elsdenii | 2 |
| Megathyrsus maximus | 1 |
| Melampsora epitea | 1 |
| Melilotus albus | 2 |
| Melissa officinalis | 1 |
| Melosira nummuloides | 1 |
| Mentha aquatica citrata | 1 |
| Mentha spicata | 3 |
| Mentha x gracilis | 1 |
| Mentha x piperita | 6 |
| Meretrix lusoria | 1 |
| Mesembryanthemum crystallinum | 2 |
| Mesocricetus auratus | 3 |
| Mesorhizobium loti | 5 |
| Metallosphaera cuprina | 1 |
| Metallosphaera sedula | 3 |
| Metazoa | 1 |
| Methanobacteria | 5 |
| Methanobacterium bryantii | 3 |
| Methanobacterium formicicum | 1 |
| Methanobacterium ivanovii | 1 |
| Methanobrevibacter | 1 |
| Methanobrevibacter arboriphilus | 2 |
| Methanobrevibacter ruminantium | 1 |
| Methanobrevibacter smithii | 2 |
| Methanocaldococcus fervens | 1 |
| Methanocaldococcus jannaschii | 31 |
| Methanocella conradii HZ254 | 1 |
| Methanococcales | 1 |
| Methanococci | 6 |
| Methanococcoides burtonii | 1 |
| Methanococcoides burtonii DSM 6242 | 1 |
| Methanococcoides sp. NaT1 | 1 |
| Methanococcus | 1 |
| Methanococcus aeolicus | 2 |
| Methanococcus maripaludis | 7 |
| Methanococcus vannielii | 1 |
| Methanococcus voltae | 5 |
| Methanoculleus | 2 |
| Methanoculleus marisnigri | 1 |
| Methanogenium | 3 |
| Methanohalobium evestigatum Z-7303 | 1 |
| Methanohalophilus mahii DSM 5219 | 1 |
| Methanohalophilus portucalensis | 3 |
| Methanolobus psychrophilus R15 | 1 |
| Methanolobus tindarius | 1 |
| Methanomicrobia | 4 |
| Methanoplanus | 1 |
| Methanoplanus limicola | 1 |
| Methanopyri | 2 |
| Methanopyrus kandleri AV19 | 1 |
| Methanosarcina | 14 |
| Methanosarcina acetivorans | 12 |
| Methanosarcina acetivorans C2A | 3 |
| Methanosarcina barkeri | 25 |
| Methanosarcina barkeri Fusaro | 2 |
| Methanosarcina mazei | 4 |
| Methanosarcina mazei Go1 | 4 |
| Methanosarcina thermophila | 20 |
| Methanosarcina TM-1 | 10 |
| Methanospirillum | 2 |
| Methanospirillum hungatei | 2 |
| Methanothermobacter marburgensis | 2 |
| Methanothermobacter marburgensis Marburg | 5 |
| Methanothermobacter thermautotrophicus | 19 |
| Methanothermobacter thermautotrophicus Delta H | 5 |
| Methanothermobacter thermautotrophicus Winter | 1 |
| Methanothermus | 4 |
| Methanothermus fervidus | 2 |
| Methanothrix | 1 |
| Methanothrix soehngenii | 1 |
| Methanothrix thermoacetophila | 1 |
| Methylibium petroleiphilum PM1 | 1 |
| Methylobacillus flagellatus | 5 |
| Methylobacillus flagellatus KT | 1 |
| Methylobacter luteus | 1 |
| Methylobacter marinus | 1 |
| Methylobacter whittenburyi | 3 |
| Methylobacterium nodulans | 1 |
| Methylobacterium organophilum | 4 |
| Methyloceanibacter caenitepidi | 1 |
| Methylocella silvestris | 2 |
| Methylococcus capsulatus | 4 |
| Methylococcus capsulatus Bath | 3 |
| Methylococcus thermophilus | 1 |
| Methylocystis echinoides | 3 |
| Methylocystis minimus | 3 |
| Methylocystis parvus | 3 |
| Methylocystis pyriformis | 3 |
| Methylomicrobium agile | 1 |
| Methylomicrobium album | 1 |
| Methylomicrobium alcaliphilum 20Z | 2 |
| Methylomicrobium japanense | 1 |
| Methylomicrobium pelagicum | 1 |
| Methylomonas aminofaciens 77a | 2 |
| Methylomonas aurantiaca | 1 |
| Methylomonas fodinarum | 1 |
| Methylomonas methanica | 1 |
| Methylomonas sp. 16a | 1 |
| Methylomonas sp. J | 2 |
| Methylomonas sp. KSPIII | 1 |
| Methylophaga thalassica | 2 |
| Methylophaga thiooxydans | 1 |
| Methylophilus methylotrophus W3A1 | 2 |
| Methylorubrum extorquens | 2 |
| Methylorubrum extorquens AM1 | 11 |
| Methylorubrum extorquens CM4 | 1 |
| Methylorubrum extorquens PA1 | 1 |
| Methylorubrum populi BJ001 | 1 |
| Methylosarcina lacus | 1 |
| Methylosinus sporium | 2 |
| Methylosinus trichosporium | 2 |
| Methylosinus trichosporium OB3b | 3 |
| Methylosphaera | 1 |
| Methylosphaera hansonii | 2 |
| Methylosulfonomonas methylovora | 1 |
| Methylosulfonomonas sp. M2 | 1 |
| Methyloversatilis universalis | 2 |
| Methylovorus mays | 2 |
| Methylovorus sp. MP688 | 1 |
| Metschnikowia pulcherrima | 1 |
| Meyerozyma guilliermondii | 2 |
| Microbacterium barkeri | 4 |
| Microbacterium imperiale | 4 |
| Microbacterium lacticum | 5 |
| Microbacterium liquefaciens | 5 |
| Microbacterium oxydans IH-35A | 1 |
| Microbacterium saperdae | 5 |
| Microbacterium sp | 1 |
| Microbacterium testaceum | 5 |
| Microchaete diplosiphon | 1 |
| Micrococcus luteus | 11 |
| Micrococcus luteus B-P 26 | 4 |
| Micrococcus percitreus | 1 |
| Microdochium sorghi | 1 |
| Micromonospora | 1 |
| Micromonospora carbonacea | 2 |
| Micromonospora echinospora | 1 |
| Micromonospora griseorubida | 2 |
| Micromonospora megalomicea | 5 |
| Micromonospora rosaria | 1 |
| Micromonospora sp. ACM2-092 | 2 |
| Micromonospora sp. ML1 | 2 |
| Microsporum canis | 1 |
| Mirabilis jalapa | 1 |
| Momordica charantia | 1 |
| Monascus pilosus | 1 |
| Monascus purpureus | 1 |
| Monascus ruber | 1 |
| Moniezia expansa | 1 |
| Moorea producens | 2 |
| Moorella thermoacetica | 8 |
| Moorella thermoautotrophica | 1 |
| Moraxella | 1 |
| Moraxella sp | 1 |
| Moraxella sp. B | 1 |
| Morchella costata | 1 |
| Morchella vulgaris | 1 |
| Morganella morganii | 3 |
| Moritella marina ATCC 15381 | 1 |
| Mortierella alpina | 5 |
| Mucor circinelloides | 1 |
| Mus musculus | 56 |
| Musa acuminata | 2 |
| Musca domestica | 4 |
| Mycena chlorophos | 1 |
| Mycobacterium | 4 |
| Mycobacterium austroafricanum IFP 2012 | 1 |
| Mycobacterium austroafricanum IFP 2015 | 1 |
| Mycobacterium avium | 5 |
| Mycobacterium avium complex (MAC) | 1 |
| Mycobacterium avium paratuberculosis | 3 |
| Mycobacterium butyricum | 1 |
| Mycobacterium gastri | 1 |
| Mycobacterium gastri MN19 | 3 |
| Mycobacterium goodii strain 12523 | 1 |
| Mycobacterium gordonae | 1 |
| Mycobacterium intracellulare | 3 |
| Mycobacterium kansasii | 2 |
| Mycobacterium lacticola | 2 |
| Mycobacterium leprae | 6 |
| Mycobacterium marinum | 5 |
| Mycobacterium sp. DSM 3803 | 1 |
| Mycobacterium sp. ELW1 | 1 |
| Mycobacterium sp. G3 | 1 |
| Mycobacterium sp. HL 4-NT-1 | 1 |
| Mycobacterium sp. NRRL B-3683 | 1 |
| Mycobacterium sp. Py1 | 1 |
| Mycobacterium tuberculosis | 32 |
| Mycobacterium tuberculosis CDC1551 | 2 |
| Mycobacterium tuberculosis complex | 1 |
| Mycobacterium tuberculosis H37Rv | 49 |
| Mycobacterium tuberculosis variant africanum | 2 |
| Mycobacterium tuberculosis variant bovis | 14 |
| Mycobacterium tuberculosis variant bovis AF2122/97 | 1 |
| Mycobacterium vaccae JOB5 | 1 |
| Mycolicibacterium farcinogenes | 3 |
| Mycolicibacterium fortuitum | 3 |
| Mycolicibacterium neoaurum VKM Ac-1815D | 1 |
| Mycolicibacterium phlei | 8 |
| Mycolicibacterium rhodesiae JS60 | 1 |
| Mycolicibacterium smegmatis | 24 |
| Mycolicibacterium smegmatis MC2 155 | 2 |
| Mycolicibacterium vaccae | 3 |
| Mycoplasma genitalium | 1 |
| Mycoplasma hominis | 1 |
| Mycoplasma pneumoniae | 1 |
| Mycoplasma pneumoniae M129 | 17 |
| Mytilus californianus | 1 |
| Mytilus edulis | 2 |
| Mytilus galloprovincialis | 1 |
| Mytilus trossulus | 1 |
| Myxococcus fulvus | 6 |
| Myxococcus xanthus | 4 |
| Myxotrichum chartarum | 1 |
| Myxotrichum stipitatum | 1 |
| Myxozyma melibiosi | 1 |
| Myzus cerasi | 1 |
| Nakazawaea anatomiae | 1 |
| Nakazawaea ernobii | 1 |
| Nakazawaea holstii | 1 |
| Nakazawaea ishiwadae | 1 |
| Nakazawaea peltata | 1 |
| Nakazawaea populi | 1 |
| Nakazawaea wickerhamii | 1 |
| Nannizzia fulva | 1 |
| Nannizzia gypsea | 1 |
| Nannizzia incurvata | 1 |
| Nannizzia nana | 1 |
| Nannizzia persicolor | 1 |
| Nannizzia racemosa | 1 |
| Nannocystis exedens | 3 |
| Narcissus aff. pseudonarcissus MK-2014 | 1 |
| Narcissus pseudonarcissus | 1 |
| Natranaerobius thermophilus | 1 |
| Natrialba | 1 |
| Natrialba magadii | 1 |
| Natronomonas | 1 |
| Nauphoeta cinerea | 1 |
| Neisseria gonorrhoeae | 1 |
| Neisseria gonorrhoeae FA 1090 | 2 |
| Neisseria gonorrhoeae MS11 | 2 |
| Neisseria meningitidis | 5 |
| Neisseria meningitidis serogroup B | 1 |
| Neisseria meningitidis Z2491 | 2 |
| Neisseriaceae | 2 |
| Neocallimastix sp. LM-2 | 2 |
| Neonectria obtusispora | 1 |
| Neonothopanus gardneri | 1 |
| Neonothopanus nambi | 1 |
| Neosiphonia paniculata | 1 |
| Nepenthes alata | 1 |
| Nepenthes rafflesiana | 1 |
| Nepeta cataria | 1 |
| Nepeta racemosa | 1 |
| Neptunia | 1 |
| Neptuniibacter caesariensis | 1 |
| Neptuniibacter sp. CAR-SF | 1 |
| Nerine bowdenii | 1 |
| Nesterenkonia halobia | 1 |
| Neurospora crassa | 14 |
| Neurospora crassa 15069 | 1 |
| Neurospora crassa 33933 | 1 |
| Nicotiana attenuata | 3 |
| Nicotiana benthamiana | 1 |
| Nicotiana glutinosa | 1 |
| Nicotiana plumbaginifolia | 1 |
| Nicotiana rustica | 1 |
| Nicotiana sylvestris | 3 |
| Nicotiana tabacum | 58 |
| Nitratiruptor sp. SB155-2 | 1 |
| Nitrobacter | 1 |
| Nitrobacter alkalicus | 1 |
| Nitrobacter hamburgensis | 1 |
| Nitrobacter vulgaris | 1 |
| Nitrobacter winogradskyi | 1 |
| Nitrococcus | 1 |
| Nitrosococcus oceani | 2 |
| Nitrosomonas | 1 |
| Nitrosomonas cryotolerans | 1 |
| Nitrosomonas europaea | 1 |
| Nitrosomonas eutropha | 1 |
| Nitrosopumilus maritimus | 1 |
| Nitrosopumilus maritimus SCM1 | 2 |
| Nitrosospira briensis | 1 |
| Nitrosospira multiformis | 2 |
| Nitrosospira tenuis | 1 |
| Nitrospina | 1 |
| Nitrospira moscoviensis | 1 |
| Nocardia | 2 |
| Nocardia asteroides | 1 |
| Nocardia brasiliensis | 1 |
| Nocardia farcinica | 1 |
| Nocardia globerula | 1 |
| Nocardia transvalensis | 1 |
| Nocardia uniformis tsuyamanensis | 1 |
| Nocardia vaccinii | 1 |
| Nocardioides simplex FJ2-1A | 1 |
| Nocardioides sp. C190 | 1 |
| Nocardioides sp. CB 22-2 | 1 |
| Nocardioides sp. JS1661 | 1 |
| Nocardioides sp. JS614 | 3 |
| Nocardioides sp. SP12 | 1 |
| Nocardiopsis | 1 |
| Nocardiopsis dassonvillei | 2 |
| Nocardiopsis sp. K-290 | 1 |
| Noctiluca scintillans | 1 |
| Nonlabens ulvanivorans | 1 |
| Nonomuraea longicatena | 1 |
| Nostoc commune | 1 |
| Nostoc punctiforme | 7 |
| Nostoc punctiforme PCC 73102 | 4 |
| Nostoc sp. 36 | 4 |
| Nostoc sp. PCC 7120 | 8 |
| Nothapodytes nimmoniana | 2 |
| Novosphingobium aromaticivorans | 1 |
| Oceanimonas doudoroffii | 2 |
| Ochrobactrum | 1 |
| Ochrobactrum anthropi | 1 |
| Ochrobactrum anthropi ATCC 49188 | 3 |
| Ochrobactrum anthropi GPK 3 | 1 |
| Ochrobactrum rhizosphaerae SJY1 | 1 |
| Ochrobactrum sp. G-1 | 1 |
| Ochrobactrum sp. JAS2 | 1 |
| Ochrobactrum tritici | 1 |
| Ochromonas danica | 1 |
| Ocimum basilicum | 9 |
| Odoribacter splanchnicus | 3 |
| Oenococcus oeni | 6 |
| Oenothera biennis | 1 |
| Oerskovia turbata | 1 |
| Ogataea angusta | 3 |
| Ogataea methanolica | 4 |
| Ogataea minuta | 3 |
| Ogataea pignaliae | 1 |
| Ogataea salicorniae | 1 |
| Olea europaea | 1 |
| Oleomonas sagaranensis | 1 |
| Oligotropha carboxidovorans | 1 |
| Onchidium | 1 |
| Oncorhynchus mykiss | 2 |
| Onygena corvina | 1 |
| Onygena equina | 1 |
| Ophiorrhiza japonica | 2 |
| Ophiorrhiza pumila | 2 |
| Oryctolagus cuniculus | 9 |
| Oryza | 1 |
| Oryza sativa | 47 |
| Oryza sativa Indica Group | 2 |
| Oryza sativa Japonica Group | 14 |
| Oryza sativa Japonica Group cultivar Nipponbare | 3 |
| Oscillatoria sp. PCC 7926 | 1 |
| Ostreococcus sp. lucimarinus | 1 |
| Ovis aries | 3 |
| Oxalobacter formigenes | 1 |
| Oxybasis rubra | 1 |
| Paecilomyces sp. (in: Eurotiomycetes) | 1 |
| Paederus sabaeus endosymbiont | 1 |
| Paenarthrobacter aurescens | 1 |
| Paenarthrobacter aurescens TC1 | 1 |
| Paenarthrobacter ilicis | 1 |
| Paenarthrobacter nicotinovorans | 2 |
| Paenarthrobacter ureafaciens | 2 |
| Paenibacillus alvei | 1 |
| Paenibacillus borealis | 1 |
| Paenibacillus macerans | 2 |
| Paenibacillus polymyxa | 2 |
| Paenibacillus polymyxa E681 | 1 |
| Paenibacillus polymyxa SC2 | 1 |
| Paenibacillus popilliae | 1 |
| Paenibacillus sp. A11-2 | 1 |
| Paenibacillus sp. JJ-1b | 1 |
| Paenibacillus terrae | 1 |
| Palmaria palmata | 1 |
| Panax ginseng | 6 |
| Panax notoginseng | 2 |
| Pandoraea pnomenusa | 1 |
| Panicum miliaceum | 1 |
| Pantoea agglomerans | 8 |
| Pantoea ananatis | 3 |
| Pantoea cypripedii | 1 |
| Pantoea stewartii | 1 |
| Pantoea stewartii stewartii | 1 |
| Papaver somniferum | 9 |
| Parabacteroides distasonis | 3 |
| Parabacteroides goldsteinii | 1 |
| Parabacteroides sp. CAG:409 | 1 |
| Paraburkholderia bryophila | 1 |
| Paraburkholderia graminis C4D1M | 2 |
| Paraburkholderia phenoliruptrix | 1 |
| Paraburkholderia phymatum | 1 |
| Paraburkholderia phytofirmans | 1 |
| Paraburkholderia phytofirmans PsJN | 1 |
| Paraburkholderia sacchari | 1 |
| Paraburkholderia xenovorans LB400 | 4 |
| Paracoccus denitrificans | 16 |
| Paracoccus denitrificans NCIMB 8944 | 1 |
| Paracoccus denitrificans NKNIS | 3 |
| Paracoccus denitrificans PD1222 | 2 |
| Paracoccus laeviglucosivorans | 1 |
| Paracoccus pantotrophus | 4 |
| Paracoccus pantotrophus NKNCYSA | 1 |
| Paracoccus sp. TRP | 1 |
| Paracoccus thiophilus | 1 |
| Paracoccus versutus | 6 |
| Paraphyton cookei | 1 |
| Paraprevotella clara | 1 |
| Paraprevotella xylaniphila | 1 |
| Passalora fulva | 1 |
| Passiflora edulis | 1 |
| Pasteurella multocida | 4 |
| Patiria pectinifera | 1 |
| Paul's Scarlet Climber Rose | 1 |
| Pavlova lutheri | 1 |
| Pavlova pinguis | 1 |
| Pavlova sp. CCMP459 | 3 |
| Pecten jacobaeus | 1 |
| Pecten maximus | 1 |
| Pectinatus frisingensis | 1 |
| Pectinotrichum llanense | 1 |
| Pectobacterium atrosepticum SCRI1043 | 3 |
| Pectobacterium carotovorum | 6 |
| Pectobacterium carotovorum carotovorum | 2 |
| Pectobacterium carotovorum carotovorum WPP14 | 2 |
| Pediococcus parvulus | 1 |
| Pediococcus pentosaceus | 3 |
| Pedobacter heparinus | 4 |
| Pedomicrobium sp. ACM 3067 | 1 |
| Peganum harmala | 1 |
| Pelargonium crispum | 1 |
| Pelobacter acetylenicus | 4 |
| Pelobacter carbinolicus | 2 |
| Pelobacter carbinolicus DSM 2380 | 1 |
| Pelobacter propionicus | 4 |
| Pelobacter venetianus | 1 |
| Pelomonas saccharophila | 3 |
| Pelosinus fermentans DSM 17108 | 1 |
| Penaeus japonicus | 1 |
| Penicilliopsis zonata | 1 |
| Penicillium aethiopicum | 5 |
| Penicillium chrysogenum | 7 |
| Penicillium cyclopium | 2 |
| Penicillium digitatum | 3 |
| Penicillium digitatum ATCC 201167 | 1 |
| Penicillium expansum | 2 |
| Penicillium glabrum | 2 |
| Penicillium griseofulvum | 1 |
| Penicillium janthinellum | 1 |
| Penicillium malachiteum | 1 |
| Penicillium olsonii | 1 |
| Penicillium palitans | 1 |
| Penicillium paxilli | 2 |
| Penicillium paxilli ATCC 26601 | 2 |
| Penicillium urticae | 1 |
| Peptoclostridium acidaminophilum | 1 |
| Peptoclostridium litorale | 1 |
| Peptoniphilus asaccharolyticus | 2 |
| Pericallis cruenta | 1 |
| Perilla citriodora | 1 |
| Perilla frutescens | 10 |
| Periplaneta americana | 2 |
| Periplaneta fuliginosa | 1 |
| Persea americana | 2 |
| Persephonella marina | 2 |
| Persicaria tinctoria | 2 |
| Petiveria alliacea | 1 |
| Petroselinum crispum | 9 |
| Petrotoga miotherma | 3 |
| Petrotoga mobilis | 3 |
| Petunia x hybrida | 21 |
| Peziza ostracoderma | 1 |
| Phaeobacter inhibens 2.10 | 1 |
| Phaeodactylum tricornutum | 3 |
| Phaeosphaeria sp. L487 | 1 |
| Phaeospirillum fulvum | 3 |
| Phaeospirillum molischianum | 3 |
| Phaffomyces opuntiae | 1 |
| Phanerochaete chrysosporium | 3 |
| Phaseolus coccineus | 2 |
| Phaseolus lunatus | 3 |
| Phaseolus vulgaris | 12 |
| Phialophora <family Herpotrichiellaceae> | 1 |
| Phlebodium aureum | 1 |
| Phleum pratense | 1 |
| Phormia regina | 1 |
| Phormidium lapideum | 1 |
| Photinus pyralis | 1 |
| Photobacterium angustum S14 | 1 |
| Photobacterium damselae | 1 |
| Photobacterium halotolerans | 1 |
| Photobacterium leiognathi leiognathi | 2 |
| Photobacterium phosphoreum | 1 |
| Photobacterium profundum SS9 | 1 |
| Photobacterium sp. SKA34 | 1 |
| Photorhabdus laumondii laumondii TTO1 | 1 |
| Photorhabdus luminescens | 1 |
| Phycomyces blakesleeanus | 1 |
| Physaria | 1 |
| Physaria fendleri | 2 |
| Physaria kathryn | 2 |
| Physaria lindheimeri | 2 |
| Physarum polycephalum | 1 |
| Physcomitrella patens | 6 |
| Phytomonas | 1 |
| Phytophthora cactorum | 1 |
| Phytophthora infestans | 1 |
| Picea abies | 10 |
| Picea glauca | 1 |
| Picea sitchensis | 1 |
| Pichia fermentans | 1 |
| Pichia norvegensis | 1 |
| Picrophilus torridus | 1 |
| Pieris rapae | 1 |
| Pigmentiphaga sp. DL-8 | 1 |
| Pimelobacter simplex | 6 |
| Pimelobacter sp. R48 | 1 |
| Pimpinella | 1 |
| Pimpinella anisum | 4 |
| Pinus banksiana | 1 |
| Pinus contorta | 4 |
| Pinus densiflora | 2 |
| Pinus ponderosa | 1 |
| Pinus sabiniana | 1 |
| Pinus strobus | 3 |
| Pinus sylvestris | 7 |
| Pinus taeda | 10 |
| Piper methysticum | 2 |
| Piper nigrum | 1 |
| Pisum sativum | 52 |
| Planococcus antarcticus | 1 |
| Planococcus citreus | 1 |
| Plasmodium falciparum | 8 |
| Plasmodium falciparum 3D7 | 2 |
| Plasmodium falciparum HB3 | 1 |
| Plasmodium malariae | 1 |
| Plasmodium ovale | 1 |
| Plasmodium vivax | 1 |
| Plectranthus barbatus | 1 |
| Plectranthus scutellarioides | 2 |
| Plesiocystis pacifica | 2 |
| Plesiomonas shigelloides | 1 |
| Plesiomonas sp. M6 | 1 |
| Plesiomonas sp. Yoshida 95 | 1 |
| Pleurotus ostreatus | 1 |
| Pleurotus sapidus | 1 |
| Plumbago europaea | 1 |
| Plumbago indica | 1 |
| Podophyllum peltatum | 3 |
| Pogostemon cablin | 4 |
| Polaribacter filamentus | 1 |
| Polaribacter irgensii 23-P | 1 |
| Polygonum cuspidatum | 2 |
| Populus | 1 |
| Populus alba | 1 |
| Populus deltoides | 3 |
| Populus nigra | 2 |
| Populus tremula x Populus alba | 1 |
| Populus tremula x Populus tremuloides | 2 |
| Populus tremuloides | 1 |
| Populus trichocarpa | 3 |
| Populus trichocarpa x Populus deltoides | 1 |
| Porphyrobacter tepidarius | 1 |
| Porphyromonas asaccharolytica | 5 |
| Porphyromonas gingivalis | 3 |
| Porphyromonas levii | 3 |
| Portulaca grandiflora | 3 |
| Portulaca oleracea | 1 |
| Postechiella marina | 1 |
| Prauserella rugosa | 1 |
| Prevotella brevis | 5 |
| Prevotella dentalis | 1 |
| Prevotella denticola | 1 |
| Prevotella intermedia | 2 |
| Prevotella melaninogenica | 5 |
| Prevotella oralis | 8 |
| Prevotella paludivivens | 1 |
| Prevotella ruminicola | 9 |
| Prochlorococcus marinus | 2 |
| Prochlorococcus marinus MIT 9211 | 1 |
| Prochlorococcus marinus MIT 9313 | 2 |
| Prochlorococcus marinus pastoris CCMP1986 | 5 |
| Prochlorococcus phage P-SSM2 | 1 |
| Prochlorococcus phage P-SSM4 | 1 |
| Prochloron didemni P2-Fiji | 1 |
| Promicromonospora citrea | 1 |
| Propionibacterium cyclohexanicum | 1 |
| Propionibacterium freudenreichii | 5 |
| Propionibacterium freudenreichii shermanii | 6 |
| Propionigenium modestum | 1 |
| Propionispora vibrioides | 1 |
| Proteiniphilum acetatigenes | 1 |
| Proteus mirabilis | 6 |
| Proteus penneri 26 | 1 |
| Proteus vulgaris | 11 |
| Proteus vulgaris OX2 | 1 |
| Protoperidinium depressum | 1 |
| Prototheca wickerhamii | 1 |
| Providencia alcalifaciens | 1 |
| Providencia stuartii | 1 |
| Prunella vulgaris | 1 |
| Prunus dulcis | 1 |
| Prunus mume | 1 |
| Prunus serotina | 1 |
| Pseudaminobacter salicylatoxidans | 2 |
| Pseudanabaena limnetica | 1 |
| Pseudanabaena limnetica Castaic Lake | 1 |
| Pseudarthrobacter oxydans | 1 |
| Pseudarthrobacter polychromogenes | 2 |
| Pseudarthrobacter sulfonivorans | 2 |
| Pseudo-nitzschia multiseries | 1 |
| Pseudoalteromonas atlantica T6c | 1 |
| Pseudoalteromonas carrageenovora | 2 |
| Pseudoalteromonas haloplanktis | 1 |
| Pseudoalteromonas haloplanktis TAC125 | 1 |
| Pseudoalteromonas luteoviolacea | 2 |
| Pseudoalteromonas luteoviolacea 2ta16 | 3 |
| Pseudoalteromonas phenolica O-BC30 | 3 |
| Pseudoalteromonas sp. AJ5 | 1 |
| Pseudoalteromonas sp. CL19 | 1 |
| Pseudoalteromonas sp. LL1 | 1 |
| Pseudoalteromonas tetraodonis | 1 |
| Pseudobacteroides cellulosolvens | 2 |
| Pseudohyphozyma bogoriensis | 2 |
| Pseudomonas | 7 |
| Pseudomonas aeruginosa | 80 |
| Pseudomonas aeruginosa O11 | 1 |
| Pseudomonas aeruginosa O12 | 1 |
| Pseudomonas aeruginosa O4 | 1 |
| Pseudomonas aeruginosa O5 | 1 |
| Pseudomonas aeruginosa PA14 | 2 |
| Pseudomonas aeruginosa PAO1 | 19 |
| Pseudomonas aeruginosa TAU-5 | 1 |
| Pseudomonas alcaligenes | 1 |
| Pseudomonas alcaligenes NCIMB 9867 | 3 |
| Pseudomonas amygdali pv. sesami | 1 |
| Pseudomonas cepacia 122 | 1 |
| Pseudomonas chloritidismutans | 1 |
| Pseudomonas chlororaphis | 1 |
| Pseudomonas chlororaphis aureofaciens | 1 |
| Pseudomonas chlororaphis aureofaciens 30-84 | 2 |
| Pseudomonas chlororaphis B23 | 2 |
| Pseudomonas chlororaphis chlororaphis | 5 |
| Pseudomonas citronellolis | 2 |
| Pseudomonas clemancea | 1 |
| Pseudomonas collierea | 1 |
| Pseudomonas cruciviae | 1 |
| Pseudomonas deceptionensis | 1 |
| Pseudomonas denitrificans (nomen rejiciendum) | 8 |
| Pseudomonas entomophila L48 | 1 |
| Pseudomonas fluorescens | 33 |
| Pseudomonas fluorescens 2-79 | 1 |
| Pseudomonas fluorescens 23F | 1 |
| Pseudomonas fluorescens ACB | 1 |
| Pseudomonas fluorescens AN103 | 1 |
| Pseudomonas fluorescens ATCC 23728 | 1 |
| Pseudomonas fluorescens BL915 | 1 |
| Pseudomonas fluorescens DSM 8341 | 1 |
| Pseudomonas fluorescens I-C | 1 |
| Pseudomonas fluorescens KU-7 | 1 |
| Pseudomonas fluorescens NCIMB 10586 | 1 |
| Pseudomonas fluorescens Pf0-1 | 3 |
| Pseudomonas fluorescens SK1 | 1 |
| Pseudomonas fluorescens ST | 1 |
| Pseudomonas fluorescens TN5 | 1 |
| Pseudomonas fragi | 4 |
| Pseudomonas hydrogenovora | 1 |
| Pseudomonas knackmussii | 6 |
| Pseudomonas LD2 | 1 |
| Pseudomonas mendocina | 4 |
| Pseudomonas mendocina (pWWO) or (pTOL) | 2 |
| Pseudomonas mevalonii | 2 |
| Pseudomonas moorei | 1 |
| Pseudomonas nitroreducens | 5 |
| Pseudomonas nitroreducens J5-1 | 1 |
| Pseudomonas oleovorans | 5 |
| Pseudomonas protegens Pf-5 | 5 |
| Pseudomonas putida | 51 |
| Pseudomonas putida 1290 | 1 |
| Pseudomonas putida 40 | 1 |
| Pseudomonas putida 77 | 2 |
| Pseudomonas putida AC866 | 3 |
| Pseudomonas putida ATCC 17453 | 4 |
| Pseudomonas putida ATCC 17484 | 1 |
| Pseudomonas putida B2 | 1 |
| Pseudomonas putida C1 | 1 |
| Pseudomonas putida CBB5 | 3 |
| Pseudomonas putida DLL-E4 | 1 |
| Pseudomonas putida DS1 | 1 |
| Pseudomonas putida F1 | 4 |
| Pseudomonas putida GB-1 | 3 |
| Pseudomonas putida GJ31 | 1 |
| Pseudomonas putida GPo1 | 1 |
| Pseudomonas putida H262 | 1 |
| Pseudomonas putida HS12 | 2 |
| Pseudomonas putida II-B | 1 |
| Pseudomonas putida J | 1 |
| Pseudomonas putida JD1 | 1 |
| Pseudomonas putida JS444 | 1 |
| Pseudomonas putida KD6 | 1 |
| Pseudomonas putida KL47 | 1 |
| Pseudomonas putida KT2440 | 9 |
| Pseudomonas putida KT2442 | 1 |
| Pseudomonas putida mt-2 | 10 |
| Pseudomonas putida N-9 | 1 |
| Pseudomonas putida NCIB 9869 | 2 |
| Pseudomonas putida NCIMB 9866 | 2 |
| Pseudomonas putida No. 352 | 1 |
| pseudomonas putida NP | 1 |
| Pseudomonas putida O1 | 1 |
| Pseudomonas putida ORC | 2 |
| Pseudomonas putida P35X | 1 |
| Pseudomonas putida PDC | 1 |
| Pseudomonas putida PL-W | 1 |
| Pseudomonas putida PpG7 | 2 |
| Pseudomonas putida S16 | 1 |
| Pseudomonas putida SQ1 | 1 |
| Pseudomonas putida strain PaWl | 1 |
| Pseudomonas putida T | 1 |
| Pseudomonas putida TG2T | 1 |
| Pseudomonas putida TW3 | 4 |
| Pseudomonas putida U | 4 |
| Pseudomonas putida UCC22 | 1 |
| Pseudomonas putida WS | 1 |
| Pseudomonas putida ZWL73 | 1 |
| Pseudomonas reinekei | 6 |
| Pseudomonas rhodesiae | 1 |
| Pseudomonas savastanoi | 1 |
| Pseudomonas savastanoi pv. glycinea | 1 |
| Pseudomonas savastanoi pv. phaseolicola | 2 |
| Pseudomonas simiae | 1 |
| Pseudomonas sp | 6 |
| Pseudomonas sp GU5 | 1 |
| Pseudomonas sp. 1-7 | 2 |
| Pseudomonas sp. 7B | 1 |
| Pseudomonas sp. A3 | 2 |
| Pseudomonas sp. ADP | 2 |
| Pseudomonas sp. AK-1 | 2 |
| Pseudomonas sp. AP3 | 1 |
| Pseudomonas sp. ATCC 17483 | 1 |
| Pseudomonas sp. B<sub>2</sub>aba | 1 |
| Pseudomonas sp. CA10 | 2 |
| Pseudomonas sp. CBB1 | 1 |
| Pseudomonas sp. CBS3 | 1 |
| Pseudomonas sp. CF600 | 3 |
| Pseudomonas sp. ENV2030 | 1 |
| Pseudomonas sp. gs1 | 2 |
| Pseudomonas sp. HH69 | 1 |
| Pseudomonas sp. HR199 | 2 |
| Pseudomonas sp. HZN6 | 1 |
| Pseudomonas sp. K-62 | 1 |
| Pseudomonas Sp. K172 | 2 |
| Pseudomonas sp. KB 740 | 2 |
| Pseudomonas sp. KIE171 | 1 |
| Pseudomonas sp. MA-1 | 1 |
| Pseudomonas sp. MG61 | 1 |
| Pseudomonas sp. ML2 | 1 |
| Pseudomonas sp. MS | 1 |
| Pseudomonas sp. NCIB 10590 | 1 |
| Pseudomonas sp. NCIB 8858 | 2 |
| Pseudomonas sp. NCIB9816-4 | 3 |
| Pseudomonas sp. NCIMB 10558 | 1 |
| Pseudomonas sp. NT4 | 3 |
| Pseudomonas sp. NyZ402 | 1 |
| Pseudomonas sp. P<sub>G</sub> | 1 |
| Pseudomonas sp. P.J. 874 | 1 |
| Pseudomonas sp. P51 | 7 |
| Pseudomonas Sp. PB16 | 1 |
| Pseudomonas sp. PL | 1 |
| Pseudomonas sp. PS14 | 3 |
| Pseudomonas sp. Ps7 | 1 |
| Pseudomonas sp. SG-MS2 | 1 |
| Pseudomonas sp. strain VM15C | 1 |
| Pseudomonas sp. TPU 7192 | 1 |
| Pseudomonas sp. VLB120 | 1 |
| Pseudomonas sp. WBC-3 | 2 |
| Pseudomonas sp. Y2 | 1 |
| Pseudomonas sp. YL | 1 |
| Pseudomonas straminea | 1 |
| Pseudomonas stutzeri | 6 |
| Pseudomonas stutzeri AN10 | 2 |
| Pseudomonas stutzeri ZWLR2-1 | 1 |
| Pseudomonas syringae | 7 |
| Pseudomonas syringae pv. syringae | 1 |
| Pseudomonas syringae pv. syringae B728a | 1 |
| Pseudomonas taiwanensis | 1 |
| Pseudomonas teessidea | 1 |
| Pseudomonas veronii 16-6A | 1 |
| Pseudonocardia autotrophica | 1 |
| Pseudonocardia sp. P1 | 1 |
| Pseudooceanicola batsensis HTCC2597 | 1 |
| Psilocybe cubensis | 1 |
| Psilocybe cyanescens | 1 |
| Psilotum nudum | 1 |
| Psychrobacillus insolitus | 2 |
| Psychrobacter urativorans | 1 |
| Psychroflexus torquis ATCC 700755 | 1 |
| Psychromonas ingrahamii | 1 |
| Psychromonas ingrahamii 37 | 1 |
| Pteris vittata | 1 |
| Puccinia coronata avenae f. sp. avenae | 1 |
| Pucciniastrum boehmeriae | 1 |
| Pueraria montana lobata | 5 |
| Punica granatum | 1 |
| Pyricularia oryzae | 1 |
| Pyrobaculum | 1 |
| Pyrobaculum aerophilum | 2 |
| Pyrobaculum arsenaticum | 1 |
| Pyrobaculum calidifontis | 3 |
| Pyrobaculum islandicum | 3 |
| Pyrobaculum neutrophilum | 2 |
| Pyrobaculum neutrophilum V24Sta | 1 |
| Pyrococcus abyssi | 5 |
| Pyrococcus furiosus | 15 |
| Pyrococcus furiosus DSM 3638 | 1 |
| Pyrococcus horikoshii | 12 |
| Pyrococcus sp. ST04 | 1 |
| Pyrococcus woesei | 2 |
| Pyrocystis fusiformis | 1 |
| Pyrocystis lunula | 1 |
| Pyrocystis noctiluca | 1 |
| Pyrodictium abyssi | 1 |
| Pyrodictium brockii | 1 |
| Pyrus pyrifolia | 1 |
| Pythium irregulare | 1 |
| Quercus robur | 2 |
| Quercus rubra | 1 |
| Ralstonia eutropha JMP222 | 3 |
| Ralstonia eutropha NH9 | 2 |
| Ralstonia pickettii | 6 |
| Ralstonia pickettii LD1 | 1 |
| Ralstonia solanacearum | 6 |
| Ralstonia sp. EDS1 | 1 |
| Ralstonia sp. JS668 | 2 |
| Ralstonia sp. T6 | 1 |
| Ralstonia sp. U2 | 3 |
| Rana catesbeiana | 1 |
| Raoultella planticola | 1 |
| Raoultella terrigena | 3 |
| Raphanus sativus | 4 |
| Raphidiopsis curvata | 1 |
| Rathayibacter iranicus | 2 |
| Rathayibacter tritici | 2 |
| Rattus | 1 |
| Rattus norvegicus | 87 |
| Rauvolfia serpentina | 2 |
| Rebecca salina | 3 |
| Renibacterium salmoninarum | 1 |
| Renilla muelleri | 1 |
| Renilla reniformis | 1 |
| Rheum palmatum | 2 |
| Rheum tataricum | 1 |
| Rhizobiaceae | 4 |
| Rhizobium etli | 1 |
| Rhizobium leguminosarum | 6 |
| Rhizobium leguminosarum bv. phaseoli | 1 |
| Rhizobium leguminosarum bv. trifolii | 2 |
| Rhizobium leguminosarum bv. viciae | 2 |
| Rhizobium leguminosarum bv. viciae 3841 | 1 |
| Rhizobium phaseoli | 2 |
| Rhizobium sp. MTP-10005 | 1 |
| Rhizobium tropici | 1 |
| Rhizophora apiculata | 1 |
| Rhizophora mangle | 1 |
| Rhizophora stylosa | 3 |
| Rhizophoraceae | 1 |
| Rhodiola rosea | 1 |
| Rhodiola sachalinensis | 1 |
| Rhodobacter capsulatus | 18 |
| Rhodobacter capsulatus SB 1003 | 1 |
| Rhodobacter sphaeroides | 18 |
| Rhodobacter sphaeroides 2.4.1 | 4 |
| Rhodobacter sphaeroides ATCC 17029 | 1 |
| Rhodococcus <high GC Gram+> | 1 |
| Rhodococcus corynebacterioides | 1 |
| Rhodococcus erythropolis | 5 |
| Rhodococcus erythropolis DCL14 | 4 |
| Rhodococcus erythropolis JCM 6824 | 1 |
| Rhodococcus erythropolis MI2 | 1 |
| Rhodococcus erythropolis XP | 1 |
| Rhodococcus fascians | 1 |
| Rhodococcus globerulus | 1 |
| Rhodococcus hoagii | 5 |
| Rhodococcus hoagii 103S | 3 |
| Rhodococcus jostii RHA1 | 7 |
| Rhodococcus N-774 | 1 |
| Rhodococcus opacus | 7 |
| Rhodococcus opacus 1CP | 1 |
| Rhodococcus opacus GM-14 | 1 |
| Rhodococcus opacus HL PM-1 | 1 |
| Rhodococcus opacus SAO101 | 1 |
| Rhodococcus percolatus | 1 |
| Rhodococcus rhodnii | 1 |
| Rhodococcus rhodochrous | 11 |
| Rhodococcus ruber | 3 |
| Rhodococcus sp | 1 |
| Rhodococcus sp. AD45 | 1 |
| Rhodococcus sp. C1 | 1 |
| Rhodococcus sp. IGTS8 | 1 |
| Rhodococcus sp. N-771 | 1 |
| Rhodococcus sp. NCIMB 12038 | 2 |
| Rhodococcus sp. PN1 | 1 |
| Rhodococcus sp. SQ1 | 2 |
| Rhodococcus sp. strain MS11 | 2 |
| Rhodococcus sp. strain SY1 | 1 |
| Rhodococcus sp. TE1 | 1 |
| Rhodococcus sp. TMP1 | 1 |
| Rhodococcus YH3-3 | 3 |
| Rhododendron dauricum | 1 |
| Rhodomicrobium vannielii | 3 |
| Rhodophiala bifida bifida | 1 |
| Rhodopirellula baltica | 1 |
| Rhodopseudomonas palustris | 10 |
| Rhodopseudomonas palustris BisB5 | 1 |
| Rhodopseudomonas palustris CGA009 | 5 |
| Rhodopseudomonas palustris DSM 123 | 1 |
| Rhodopseudomonas palustris TIE-1 | 1 |
| Rhodospirillum rubrum | 12 |
| Rhodothermus marinus | 2 |
| Rhodotorula glutinis | 2 |
| Rhodovulum sulfidophilum | 2 |
| Rhus typhina | 2 |
| Rhyparobia maderae | 1 |
| Ribes nigrum | 1 |
| Ricinus communis | 14 |
| Rickettsia prowazekii | 1 |
| Rickettsia prowazekii Madrid E | 1 |
| Robbsia andropogonis | 1 |
| Robinia pseudoacacia | 1 |
| Roccella tinctoria | 1 |
| Rosa | 1 |
| Rosa chinensis | 3 |
| Rosa hybrid cultivar | 9 |
| Rosales | 1 |
| Roseiflexus castenholzii | 1 |
| Roseiflexus sp. RS-1 | 1 |
| Roseovarius nubinhibens ISM | 4 |
| Rubia tinctorum | 2 |
| Rubrivivax gelatinosus | 14 |
| Rubrobacter xylanophilus | 2 |
| Rubus idaeus | 2 |
| Rubus idaeus strigosus | 1 |
| Rudbeckia hirta | 1 |
| Ruegeria atlantica | 1 |
| ruegeria frisia | 1 |
| Ruegeria pomeroyi | 1 |
| Ruegeria pomeroyi DSS-3 | 7 |
| Ruminiclostridium cellulolyticum | 2 |
| Ruminiclostridium josui | 2 |
| Ruminiclostridium papyrosolvens | 2 |
| Ruminococcus albus | 2 |
| Ruminococcus albus 7 = DSM 20455 | 1 |
| Ruminococcus albus 8 | 1 |
| Ruminococcus albus NE1 | 1 |
| Ruminococcus gnavus N53 | 1 |
| Ruminococcus sp. PO1-3 | 1 |
| Ruta graveolens | 3 |
| Saccharolobus shibatae | 1 |
| Saccharolobus solfataricus | 24 |
| Saccharolobus solfataricus 98/2 | 1 |
| Saccharolobus solfataricus P2 | 3 |
| Saccharomyces cerevisiae | 195 |
| Saccharomyces cerevisiae S288C | 8 |
| Saccharomyces chevalieri | 1 |
| Saccharopolyspora | 1 |
| Saccharopolyspora erythraea | 3 |
| Saccharopolyspora erythraea NRRL 2338 | 5 |
| Saccharopolyspora rectivirgula | 1 |
| Saccharopolyspora spinosa | 3 |
| Saccharum officinarum | 2 |
| Sagittula stellata E-37 | 1 |
| Salinispora arenicola | 2 |
| Salinispora tropica | 1 |
| Salinivibrio costicola | 4 |
| Salipiger bermudensis HTCC2601 | 1 |
| Salmonella enterica | 3 |
| Salmonella enterica enterica serovar Adelaide | 1 |
| Salmonella enterica enterica serovar Agona | 2 |
| Salmonella enterica enterica serovar Paratyphi A | 1 |
| Salmonella enterica enterica serovar Paratyphi B | 1 |
| Salmonella enterica enterica serovar Paratyphi C | 1 |
| Salmonella enterica enterica serovar Typhi | 5 |
| Salmonella enterica enterica serovar Typhimurium | 48 |
| Salmonella enterica enterica serovar Typhimurium str. 14028S | 2 |
| Salmonella enterica enterica serovar Typhimurium str. LT2 | 10 |
| Salmonella enterica O54 | 1 |
| Salvia fruticosa | 1 |
| Salvia hispanica | 1 |
| Salvia officinalis | 3 |
| Salvia rosmarinus | 1 |
| Salvia splendens | 2 |
| Salvia stenophylla | 1 |
| Sandaracinus amylolyticus | 1 |
| Sandarakinorhabdus limnophila | 1 |
| Sander vitreus | 1 |
| Sanguinaria canadensis | 2 |
| Santalum album | 2 |
| Santalum austrocaledonicum | 1 |
| Santalum spicatum | 1 |
| Saturnispora diversa | 1 |
| Saturnispora silvae | 1 |
| Sauromatum venosum | 1 |
| Saussurea medusa | 2 |
| Scapharca broughtonii | 1 |
| Sceloporus jarrovii | 1 |
| Scheffersomyces stipitis CBS 6054 | 1 |
| Schistocerca gregaria | 1 |
| Schizochytrium sp. ATCC 20888 | 1 |
| Schizonepeta tenuifolia | 1 |
| Schizophyllum commune | 1 |
| Schizosaccharomyces pombe | 6 |
| Schizosaccharomyces pombe 972h- | 1 |
| Sclerotinia sclerotiorum | 1 |
| Scutellaria baicalensis | 3 |
| Scutellaria viscidula | 1 |
| Scytonema sp | 1 |
| Secale cereale | 9 |
| Selenomonas ruminantium | 2 |
| Senecio | 1 |
| Senecio vernalis | 1 |
| Senecio vulgaris | 1 |
| Septoria lycopersici | 1 |
| Serratia liquefaciens | 1 |
| Serratia marcescens | 12 |
| Serratia marcescens H30 | 1 |
| Serratia plymuthica | 4 |
| Serratia plymuthica 4Rx13 | 1 |
| Serratia proteamaculans 568 | 1 |
| Serratia sp. DS001 | 1 |
| Sesamum alatum | 1 |
| Sesamum indicum | 3 |
| Sesamum radiatum | 2 |
| Sesbania rostrata | 2 |
| Setaria italica | 1 |
| Setophoma sacchari | 1 |
| Shanorella spirotricha | 1 |
| Shewanella algae | 1 |
| Shewanella amazonensis SB2B | 1 |
| Shewanella denitrificans | 1 |
| Shewanella denitrificans OS217 | 1 |
| Shewanella hanedai | 1 |
| Shewanella oneidensis | 3 |
| Shewanella oneidensis MR-1 | 6 |
| Shewanella pneumatophori | 1 |
| Shewanella putrefaciens | 4 |
| Shewanella putrefaciens 200 | 1 |
| Shewanella sp. ANA-3 | 3 |
| Shewanella sp. GA-22 | 1 |
| Shewanella sp. MR-4 | 2 |
| Shewanella sp. MR-7 | 2 |
| Shigella boydii | 1 |
| Shigella flexneri | 1 |
| Shinella sp. HZN7 | 1 |
| Silene dioica | 3 |
| Silene latifolia | 2 |
| Silene latifolia alba | 1 |
| Simmondsia chinensis | 2 |
| Sinapis alba | 1 |
| Sinningia cardinalis | 2 |
| Sinomonas atrocyanea | 3 |
| Sinopodophyllum hexandrum | 3 |
| Sinorhizobium fredii | 2 |
| Sinorhizobium fredii NGR234 | 3 |
| Sinorhizobium meliloti | 15 |
| Sinorhizobium meliloti 1021 | 8 |
| Sinorhizobium meliloti Rm2011 | 12 |
| Sipunculus nudus | 1 |
| Slackia isoflavoniconvertens | 1 |
| Slackia sp. NATTS | 1 |
| Slafractonia leguminicola | 1 |
| Solanum | 1 |
| Solanum aculeatissimum | 1 |
| Solanum habrochaites | 9 |
| Solanum habrochaites 1731 | 1 |
| Solanum habrochaites 1777 | 1 |
| Solanum habrochaites 2098 | 1 |
| Solanum habrochaites 2861 | 1 |
| Solanum lycopersicum | 67 |
| Solanum melongena | 1 |
| Solanum pennellii | 4 |
| Solanum tuberosum | 47 |
| Solidago canadensis | 2 |
| Sophora flavescens | 1 |
| Sorbus aucuparia | 2 |
| Sorghum bicolor | 7 |
| Spartina | 1 |
| Sphaerobacter | 1 |
| Sphingobacterium mizutaii | 1 |
| Sphingobium chlorophenolicum | 2 |
| Sphingobium fuliginis | 2 |
| Sphingobium japonicum | 1 |
| Sphingobium japonicum BiD32 | 1 |
| Sphingobium sp. SYK-6 | 1 |
| Sphingobium sp. UG30 | 1 |
| Sphingomonas astaxanthinifaciens | 1 |
| Sphingomonas elodea | 1 |
| Sphingomonas lacus | 1 |
| Sphingomonas paucimobilis | 1 |
| Sphingomonas sp. A1 | 1 |
| Sphingomonas sp. CB3 | 1 |
| Sphingomonas sp. PH-07 | 1 |
| Sphingomonas sp. SKA58 | 1 |
| Sphingomonas sp. SS3 | 1 |
| Sphingomonas sp. SYK6 | 9 |
| Sphingomonas sp. XLDN2-5 | 1 |
| Sphingomonas wittichii RW1 | 3 |
| Sphingopyxis sp. 113P3 | 1 |
| Sphinx ligustri | 1 |
| Spinacia oleracea | 29 |
| Spirodela polyrhiza | 1 |
| Spiroplasma citri | 1 |
| Spodoptera | 1 |
| Spodoptera littoralis | 3 |
| Sporobolus alterniflorus | 2 |
| Sporolactobacillus inulinus | 2 |
| Sporomusa malonica | 1 |
| Sporomusa ovata | 2 |
| Sporomusa silvacetica | 1 |
| Sporomusa termitida | 1 |
| Sporosarcina globispora | 1 |
| Sporosarcina pasteurii | 3 |
| Sporosarcina ureae | 3 |
| Staphylococcus aureus | 21 |
| Staphylococcus aureus aureus | 1 |
| Staphylococcus aureus aureus ATCC 25923 | 2 |
| Staphylococcus aureus aureus KCTC 1928 | 1 |
| Staphylococcus aureus aureus N315 | 1 |
| Staphylococcus aureus aureus NCTC 8325 | 1 |
| Staphylococcus capitis | 3 |
| Staphylococcus cohnii | 2 |
| Staphylococcus epidermidis | 3 |
| Staphylococcus haemolyticus | 3 |
| Staphylococcus hominis | 2 |
| Staphylococcus lentus | 2 |
| Staphylococcus pseudintermedius | 1 |
| Staphylococcus saprophyticus | 2 |
| Staphylococcus sciuri | 1 |
| Staphylococcus sciuri sciuri | 2 |
| Staphylococcus simulans | 2 |
| Staphylococcus warneri | 3 |
| Staphylococcus xylosus | 2 |
| Staphylothermus marinus | 1 |
| Starkeya novella | 5 |
| Starmera amethionina | 1 |
| Starmera caribaea | 1 |
| Starmerella bombicola | 1 |
| Starmerella lactis-condensi | 1 |
| Starmerella stellata | 1 |
| Stellaria media | 2 |
| Stemphylium loti | 1 |
| Stenotrophomonas maltophilia | 8 |
| Stenotrophomonas sp. G1 | 1 |
| Stephanurus dentatus | 1 |
| Sterculia foetida | 1 |
| Stetteria hydrogenophila | 1 |
| Stevia rebaudiana | 2 |
| Stigmatella aurantiaca | 3 |
| Stigmatella aurantiaca Sg a15 | 1 |
| Streptoalloteichus tenebrarius | 1 |
| Streptococcus | 1 |
| Streptococcus agalactiae | 7 |
| Streptococcus agalactiae NEM316 | 1 |
| Streptococcus equinus | 1 |
| Streptococcus mutans | 5 |
| Streptococcus oralis | 1 |
| Streptococcus pasteurianus | 2 |
| Streptococcus pneumoniae | 14 |
| Streptococcus pneumoniae 23F | 1 |
| Streptococcus pneumoniae R6 | 1 |
| Streptococcus pyogenes | 2 |
| Streptococcus ratti | 1 |
| Streptococcus salivarius | 2 |
| Streptococcus sanguinis | 2 |
| Streptococcus thermophilus | 3 |
| Streptococcus uberis | 1 |
| Streptomyces | 5 |
| Streptomyces achromogenes rubradiris | 1 |
| Streptomyces actuosus | 1 |
| Streptomyces aizunenesis NRRL-B-11277 | 1 |
| Streptomyces albidoflavus | 1 |
| Streptomyces alboniger | 1 |
| Streptomyces albus | 2 |
| Streptomyces ambofaciens ATCC 23877 | 1 |
| Streptomyces antibioticus | 8 |
| Streptomyces anulatus | 2 |
| Streptomyces arenae | 1 |
| Streptomyces argillaceus | 2 |
| Streptomyces arginensis | 2 |
| Streptomyces avermitilis | 7 |
| Streptomyces avermitilis MA-4680 = NBRC 14893 | 1 |
| Streptomyces bikiniensis | 3 |
| Streptomyces caespitosus | 1 |
| Streptomyces cattleya | 1 |
| Streptomyces chartreusis | 1 |
| Streptomyces chrestomyceticus | 2 |
| Streptomyces cinnabarinus | 1 |
| Streptomyces clavuligerus | 7 |
| Streptomyces coelicolor | 7 |
| Streptomyces coelicolor A3(2) | 11 |
| Streptomyces collinus | 4 |
| Streptomyces davaonensis | 1 |
| Streptomyces diastatochromogenes | 1 |
| Streptomyces echinatus | 1 |
| Streptomyces exfoliatus | 1 |
| Streptomyces felleus | 1 |
| Streptomyces flaveolus | 2 |
| Streptomyces flavochromogenes | 1 |
| Streptomyces fradiae | 8 |
| Streptomyces galbus | 1 |
| Streptomyces galilaeus | 1 |
| Streptomyces gardneri | 1 |
| Streptomyces garyphalus | 1 |
| Streptomyces glaucescens | 1 |
| Streptomyces griseochromogenes | 1 |
| Streptomyces griseosporeus | 1 |
| Streptomyces griseovariabilis bandungensis | 2 |
| Streptomyces griseus | 15 |
| Streptomyces griseus griseus NBRC 13350 | 2 |
| Streptomyces hygroscopicus | 5 |
| Streptomyces hygroscopicus 10-22 | 1 |
| Streptomyces hygroscopicus ATCC 21705 | 1 |
| Streptomyces hygroscopicus jinggangensis | 1 |
| Streptomyces hygroscopicus jinggangensis 5008 | 1 |
| Streptomyces hygroscopicus limoneus | 1 |
| Streptomyces kanamyceticus | 1 |
| Streptomyces lasaliensis | 2 |
| Streptomyces lasaliensis NRRL3382R | 1 |
| Streptomyces lavendulae | 3 |
| Streptomyces lavendulae lavendulae | 1 |
| Streptomyces leeuwenhoekii | 1 |
| Streptomyces lincolnensis | 2 |
| Streptomyces lividans | 1 |
| Streptomyces lividus | 1 |
| Streptomyces longisporoflavus | 1 |
| Streptomyces luridus | 1 |
| Streptomyces lysosuperificus | 1 |
| Streptomyces maritimus | 3 |
| Streptomyces mediolani | 1 |
| Streptomyces melanosporofaciens | 1 |
| Streptomyces morookaense | 1 |
| Streptomyces mycarofaciens | 1 |
| Streptomyces narbonensis | 1 |
| Streptomyces nodosus asukaensis | 1 |
| Streptomyces noursei ATCC 11455 | 1 |
| Streptomyces odorifer | 1 |
| Streptomyces olivaceus | 2 |
| Streptomyces orinoci | 1 |
| Streptomyces ornatus | 1 |
| Streptomyces parvulus | 2 |
| Streptomyces peucetius | 2 |
| Streptomyces peucetius caesius | 3 |
| Streptomyces peucetius caesius ATCC 27952 | 1 |
| Streptomyces pilosus | 2 |
| Streptomyces platensis | 1 |
| Streptomyces ravidus | 1 |
| Streptomyces ribosidificus | 1 |
| Streptomyces rimosus | 6 |
| Streptomyces rimosus rimosus ATCC 10970 | 2 |
| Streptomyces rishiriensis | 2 |
| Streptomyces rochei | 1 |
| Streptomyces roseochromogenus oscitans | 3 |
| Streptomyces roseogriseus | 1 |
| Streptomyces rubellomurinus | 1 |
| Streptomyces scabiei 87.22 | 1 |
| Streptomyces somaliensis | 1 |
| Streptomyces sp. AC7 | 1 |
| Streptomyces sp. C5 | 1 |
| Streptomyces sp. CS | 1 |
| Streptomyces sp. FR-008 | 2 |
| Streptomyces sp. K01-0509 | 1 |
| Streptomyces sp. K30 | 1 |
| Streptomyces sp. KCTC 0041BP | 1 |
| Streptomyces sp. MM23 | 1 |
| Streptomyces sp. SA-COO | 2 |
| Streptomyces sp. SNA15896 | 1 |
| Streptomyces sp. strain V-1 | 1 |
| Streptomyces sp. TP-A0274 | 1 |
| Streptomyces sp. WA46 | 2 |
| Streptomyces sp. XZQH13 | 2 |
| Streptomyces spectabilis | 3 |
| Streptomyces spiralis | 1 |
| Streptomyces thioluteus | 1 |
| Streptomyces triostinicus | 2 |
| Streptomyces venezuelae | 4 |
| Streptomyces venezuelae ATCC 10712 | 2 |
| Streptomyces verticillus | 1 |
| Streptomyces violaceochromogenes | 1 |
| Streptomyces virginiae | 1 |
| Streptomyces viridochromogenes | 1 |
| Streptomyces viridochromogenes DSM 40736 | 1 |
| Streptomyces wedmorensis | 1 |
| Streptomyces zaomyceticus | 1 |
| Streptosporangium sibiricum | 1 |
| Strobilanthes cusia | 2 |
| Stygiolobus azoricus | 1 |
| Suberites domuncula | 1 |
| Suillus grevillei | 1 |
| Sulfitobacter | 1 |
| Sulfitobacter pontiacus | 1 |
| Sulfitobacter sp. EE-36 | 1 |
| Sulfitobacter sp. NAS-14.1 | 1 |
| Sulfobacillus thermosulfidooxidans | 1 |
| Sulfolobus acidocaldarius | 8 |
| Sulfolobus acidocaldarius DSM 639 | 2 |
| Sulfolobus islandicus | 1 |
| Sulfuricella denitrificans | 1 |
| Sulfuriferula plumbiphila | 1 |
| Sulfurimonas denitrificans | 1 |
| Sulfurisphaera tokodaii | 9 |
| Sulfurisphaera tokodaii 7 | 2 |
| Sulfurospirillum arcachonense | 1 |
| Sulfurospirillum arsenophilum | 1 |
| Sulfurospirillum barnesii | 1 |
| Sulfurospirillum deleyianum | 1 |
| Sulfurospirillum multivorans | 1 |
| Sus scrofa | 20 |
| Symbiobacterium thermophilum | 1 |
| symbiont bacterium of Paederus fuscipes | 1 |
| Synechococcus elongatus | 4 |
| Synechococcus elongatus PCC 6301 | 2 |
| Synechococcus elongatus PCC 7942 | 12 |
| Synechococcus nidulans | 1 |
| Synechococcus sp. PCC 7002 | 12 |
| Synechococcus sp. PCC 7335 | 1 |
| Synechococcus sp. RS9916 | 1 |
| Synechococcus sp. WH 8020 | 1 |
| Synechococcus sp. WH 8102 | 1 |
| Synechocystis | 5 |
| Synechocystis sp. PCC 6803 | 36 |
| Synechocystis sp. PCC 6803 substr. Kazusa | 1 |
| Syngamus trachea | 1 |
| Syntrophococcus sucromutans | 1 |
| Syntrophomonas wolfei | 1 |
| Syntrophus aciditrophicus | 1 |
| Syntrophus buswellii | 1 |
| Syntrophus gentianae | 1 |
| Syzygium aromaticum | 1 |
| Tagetes erecta | 1 |
| Tagetes patula | 1 |
| Talaromyces stipitatus | 1 |
| Tanacetum balsamita | 1 |
| Tanacetum cinerariifolium | 1 |
| Tanacetum parthenium | 2 |
| Tanacetum vulgare | 1 |
| Tannerella forsythia | 1 |
| Taphrina deformans | 1 |
| Taphrina pruni | 1 |
| Taphrina wiesneri | 1 |
| Tapinella panuoides | 1 |
| Taraxacum kok-saghyz | 1 |
| Taxus baccata | 1 |
| Taxus brevifolia | 1 |
| Taxus canadensis | 1 |
| Taxus chinensis | 2 |
| Taxus cuspidata | 3 |
| Taxus x media | 1 |
| Tecoma stans | 1 |
| Teleostei | 1 |
| Tellima grandiflora | 1 |
| Telluria mixta | 1 |
| Tephrosia vogelii | 1 |
| Terrabacter sp. DPO360 | 1 |
| Tetradesmus obliquus | 1 |
| Tetragenococcus koreensis | 1 |
| Tetragenococcus muriaticus | 1 |
| Tetrahymena pyriformis | 5 |
| Tetrahymena thermophila | 1 |
| Tetraselmis | 1 |
| Thalassiosira pseudonana | 1 |
| Thalassiosira pseudonana CCMP1335 | 1 |
| Thalictrum bulgaricum | 1 |
| Thalictrum flavum | 3 |
| Thalictrum flavum glaucum | 1 |
| Thalictrum tuberosum | 1 |
| Thauera aromatica | 8 |
| Thauera butanivorans | 2 |
| Theobroma cacao | 1 |
| Thermacetogenium phaeum DSM 12270 | 1 |
| Thermincola potens JR | 1 |
| Thermithiobacillus tepidarius | 2 |
| Thermoanaerobacter brockii | 2 |
| Thermoanaerobacter pseudethanolicus | 1 |
| Thermoanaerobacterium saccharolyticum | 1 |
| Thermoanaerobacterium thermosaccharolyticum | 2 |
| Thermoascus | 1 |
| Thermoascus aurantiacus | 1 |
| Thermoascus crustaceus | 1 |
| Thermobaculum | 1 |
| Thermobifida fusca | 2 |
| Thermococcus celer | 1 |
| Thermococcus gammatolerans | 1 |
| Thermococcus kodakarensis | 7 |
| Thermococcus kodakarensis KOD1 | 5 |
| Thermococcus litoralis | 3 |
| Thermococcus onnurineus | 1 |
| Thermococcus onnurineus NA1 | 1 |
| Thermococcus sp. B1001 | 1 |
| Thermococcus stetteri | 1 |
| Thermodesulfobacterium commune | 2 |
| Thermodesulforhabdus norvegica | 1 |
| Thermodesulfovibrio yellowstonii | 1 |
| Thermomicrobium | 1 |
| Thermoplasma acidophilum | 7 |
| Thermoplasma volcanium | 1 |
| Thermoproteus | 1 |
| Thermoproteus tenax | 5 |
| Thermosipho melanesiensis | 1 |
| Thermosynechococcus elongatus | 1 |
| Thermosynechococcus elongatus BP-1 | 4 |
| Thermotoga maritima | 19 |
| Thermotoga neapolitana | 2 |
| Thermus aquaticus | 7 |
| Thermus caldophilus | 1 |
| Thermus thermophilus | 10 |
| Thermus thermophilus HB8 | 5 |
| Thioalkalicoccus limnaeus | 1 |
| Thioalkalivibrio paradoxus | 1 |
| Thioalkalivibrio thiocyanodenitrificans | 1 |
| Thioalkalivibrio thiocyanoxidans | 1 |
| Thioalkalivibrio thiocyanoxidans ARh 4 | 2 |
| Thiobacillus denitrificans | 3 |
| Thiobacillus sp. W5 | 3 |
| Thiobacillus thioparus | 10 |
| Thiobacillus thioparus T5 | 1 |
| Thiobacillus thioparus THI 115 | 1 |
| Thiobacillus thioparus TK-m | 2 |
| Thiocapsa marina | 1 |
| Thiocapsa roseopersicina | 2 |
| Thiocapsa roseopersicina M11 | 1 |
| Thiococcus pfennigii | 1 |
| Thioflavicoccus mobilis | 1 |
| Thiohalophilus thiocyanatoxydans | 1 |
| Thiomonas delicata | 1 |
| Thiothrix ramosa | 1 |
| Thraustochytrium sp. ATCC21685 | 1 |
| Thuja plicata | 1 |
| Thunbergia alata | 2 |
| Tilletia caries | 1 |
| Tissierella creatinini | 1 |
| Tissierella creatinophila | 1 |
| Todarodes pacificus | 1 |
| Toxicodendron vernicifluum | 1 |
| Toxoplasma gondii | 1 |
| Toxoplasma gondii ME49 | 1 |
| Toxoplasma gondii RH | 1 |
| Treponema denticola | 3 |
| Treponema pallidum | 2 |
| Treponema phagedenis | 1 |
| Treponema vincentii | 1 |
| Trichinella spiralis | 1 |
| Trichoderma arundinaceum | 2 |
| Trichoderma brevicompactum | 2 |
| Trichoderma harzianum | 1 |
| Trichoderma reesei | 10 |
| Trichoderma reesei QM9414 | 1 |
| Trichoderma viride | 2 |
| Trichodesmium erythraeum | 2 |
| Trichomonas vaginalis | 2 |
| Trichophyton benhamiae | 2 |
| Trichophyton mentagrophytes | 1 |
| Trichophyton simii | 1 |
| Trichormus variabilis | 10 |
| Trichormus variabilis ATCC 29413 | 3 |
| Trichosanthes kirilowii | 1 |
| Trichosporon moniliiforme WU-0401 | 1 |
| Trifolium incarnatum | 1 |
| Trifolium pratense | 5 |
| Trifolium repens | 1 |
| Triglochin maritima | 3 |
| Triticum aestivum | 26 |
| Triticum spelta | 1 |
| Tritrichomonas suis | 1 |
| Trypanosoma brucei | 2 |
| Trypanosoma brucei brucei | 1 |
| Trypanosoma cruzi | 2 |
| Trypanosoma vivax | 1 |
| Tsukamurella paurometabola | 3 |
| Tyria jacobaeae | 1 |
| Ulva curvata | 1 |
| Ulva intestinalis | 1 |
| Ulva lactuca | 1 |
| Umezakia natans | 1 |
| Uncinocarpus reesii | 1 |
| uncultured bacterium HF130_AEPn_1 | 1 |
| unidentified bacterium BIS-6 | 1 |
| unidentified bacterium DG-C1 | 1 |
| unidentified bacterium MM-P | 1 |
| Urochloa panicoides | 1 |
| Ustilago cynodontis | 2 |
| Ustilago hordei | 1 |
| Ustilago maydis | 6 |
| Ustilago nuda | 1 |
| Ustilago sphaerogena | 2 |
| Ustilago syntherismae | 1 |
| Vaccinia virus | 1 |
| Vaccinium myrtillus | 1 |
| Vaccinium vitis-idaea | 1 |
| Vanilla planifolia | 2 |
| Vanrija humicola | 1 |
| Variovorax paradoxus | 1 |
| Variovorax paradoxus B4 | 1 |
| Variovorax sp. PBS-H4 | 1 |
| Variovorax sp. SRS16 | 1 |
| Variovorax sp. WDL1 | 1 |
| Veillonella parvula | 5 |
| Vernicia fordii | 1 |
| Vernonia galamensis | 1 |
| Vertebrata lanosa | 1 |
| Verticillium sp. DSP | 1 |
| Vibrio alginolyticus | 3 |
| Vibrio alginolyticus NBRC 15630 = ATCC 17749 | 2 |
| Vibrio anguillarum serovar O1 | 1 |
| Vibrio anguillarum serovar O2 | 1 |
| Vibrio cholerae | 12 |
| Vibrio cholerae 569B | 1 |
| Vibrio cholerae non-O1 | 2 |
| Vibrio cholerae O1 | 3 |
| Vibrio cholerae O1 biovar El Tor str. N16961 | 2 |
| Vibrio cholerae O139 | 2 |
| Vibrio cholerae O37 | 1 |
| Vibrio fluvialis JS17 | 1 |
| Vibrio furnissii | 2 |
| Vibrio harveyi | 5 |
| Vibrio parahaemolyticus | 4 |
| Vibrio sp. AX-4 | 1 |
| Vibrio sp. EJY3 | 1 |
| Vibrio sp. JT0107 | 1 |
| Vibrio sp. K-7 | 1 |
| Vibrio sp. XY-214 | 1 |
| Vibrio vulnificus | 2 |
| Vibrio vulnificus CMCP6 | 3 |
| Vibrionaceae | 1 |
| Viburnum furcatum | 1 |
| Vicia faba | 6 |
| Vicia faba Chukyo | 1 |
| Vicia sativa nigra | 1 |
| Vigna aconitifolia | 3 |
| Vigna angularis | 3 |
| Vigna radiata | 2 |
| Vigna radiata radiata | 10 |
| Virgibacillus pantothenticus | 3 |
| Vitis labrusca | 1 |
| Vitis labrusca x Vitis vinifera | 1 |
| Vitis vinifera | 14 |
| Vogesella indigofera | 1 |
| Wachendorfia thyrsiflora | 1 |
| Watasenia scintillans | 1 |
| Weissella confusa | 1 |
| Weissella paramesenteroides | 1 |
| Weissella viridescens | 2 |
| Wickerhamiella galacta | 1 |
| Wickerhamomyces anomalus | 1 |
| Wickerhamomyces mucosus | 1 |
| Wolinella succinogenes | 3 |
| Wollastonia biflora | 1 |
| Xanthobacter | 4 |
| Xanthobacter agilis | 1 |
| Xanthobacter autotrophicus | 3 |
| Xanthobacter autotrophicus Py2 | 5 |
| Xanthobacter flavus | 1 |
| Xanthobacter flavus 14p1 | 3 |
| Xanthomonas arboricola | 3 |
| Xanthomonas axonopodis | 2 |
| Xanthomonas campestris | 10 |
| Xanthomonas campestris pv. campestris | 1 |
| Xanthomonas citri | 2 |
| Xanthomonas oryzae | 4 |
| Xanthomonas oryzae pv. oryzae | 1 |
| Xanthomonas sp. 35Y | 2 |
| Xanthomonas translucens | 1 |
| Xanthophyllomyces dendrorhous | 6 |
| Xanthothecium peruvianum | 1 |
| Xenopus laevis | 1 |
| Xenorhabdus nematophila ATCC 19061 | 1 |
| Xylella fastidiosa | 1 |
| Yarrowia lipolytica | 5 |
| Yersinia enterocolitica | 6 |
| Yersinia frederiksenii | 1 |
| Yersinia intermedia | 1 |
| Yersinia kristensenii | 1 |
| Yersinia pestis | 2 |
| Yersinia pseudotuberculosis | 8 |
| Yersinia pseudotuberculosis (type O:2a) | 1 |
| Yersinia ruckeri | 1 |
| Yersinia sp. EA015 | 1 |
| Yoonia vestfoldensis SKA53 | 1 |
| Zea luxurians | 1 |
| Zea mays | 51 |
| Zea mays huehuetenangensis | 1 |
| Zea mays mays | 2 |
| Zea mays mexicana | 1 |
| Zea mays parviglumis | 1 |
| Zingiber officinale | 3 |
| Zingiber zerumbet | 2 |
| Zobellia galactanivorans | 4 |
| Zoogloea ramigera | 1 |
| Zygosaccharomyces rouxii | 1 |
| Zymomonas mobilis | 5 |
| [Bacillus] caldovelox | 1 |
| [Bacillus] selenitireducens | 1 |
| [Brevibacterium] flavum | 1 |
| [Butyribacterium] methylotrophicum | 1 |
| [Candida] berthetii | 1 |
| [Candida] boidinii | 4 |
| [Candida] dendrica | 1 |
| [Candida] ethanolica | 1 |
| [Candida] fennica | 1 |
| [Candida] gotoi | 1 |
| [Candida] incommunis | 1 |
| [Candida] inconspicua | 1 |
| [Candida] maris | 1 |
| [Candida] maritima | 1 |
| [Candida] methanosorbosa | 1 |
| [Candida] montana | 1 |
| [Candida] nanaspora | 1 |
| [Candida] nemodendra | 1 |
| [Candida] nitratophila | 1 |
| [Candida] norvegica | 1 |
| [Candida] odintsovae | 1 |
| [Candida] ovalis | 1 |
| [Candida] pini | 1 |
| [Candida] pseudolambica | 1 |
| [Candida] quercuum | 1 |
| [Candida] rhagii | 1 |
| [Candida] rugopelliculosa | 1 |
| [Candida] silvicultrix | 1 |
| [Candida] sonorensis | 1 |
| [Candida] sorboxylosa | 1 |
| [Candida] stellimalicola | 1 |
| [Candida] succiphila | 1 |
| [Candida] vartiovaarae | 1 |
| [Clostridium] hylemonae DSM 15053 | 1 |
| [Clostridium] scindens | 1 |
| [Clostridium] scindens ATCC 35704 | 1 |
| [Clostridium] sporosphaeroides | 1 |
| [Clostridium] symbiosum | 1 |
| [Flavobacterium] lutescens | 1 |
| [Haemophilus] ducreyi | 3 |
| [Nectria] haematococca | 2 |
| [Pseudomonas] geniculata | 2 |
| [Ruminococcus] gnavus | 1 |
| [Ruminococcus] gnavus ATCC 29149 | 3 |
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