The pathways in MetaCyc were curated from a wide variety of organisms. Every pathway is labeled with the name of one or more taxonomic groups in which experiments have indicated that the pathway is present. These taxonomic designations include species names, species and strain names, and names of higher taxa such as genus names. When a high-level taxon, such as a genus, is present as a pathway label, the interpretation is that experimental evidence suggests that the pathway is present in all members of that taxon. This table provides the number of pathways associated with each of these taxonomic designations in the current version of MetaCyc.
Note that the fact that a pathway is labeled as occurring in a given taxon does not mean that the pathway does not in fact occur in other taxa. It may be that relevant experiments have not been done, or that MetaCyc curators have not yet curated the relevant literature.
| Organism | Number of pathways |
| Escherichia coli K-12 substr. MG1655 | 351 |
| Arabidopsis thaliana col | 344 |
| Homo sapiens | 307 |
| Saccharomyces cerevisiae | 202 |
| Rattus norvegicus | 88 |
| Pseudomonas aeruginosa | 77 |
| Solanum lycopersicum | 68 |
| Glycine max | 66 |
| Bacillus subtilis | 64 |
| Nicotiana tabacum | 58 |
| Mus musculus | 56 |
| Pisum sativum | 53 |
| Pseudomonas putida | 51 |
| Zea mays | 50 |
| Salmonella enterica enterica serovar Typhimurium | 48 |
| Oryza sativa | 48 |
| Solanum tuberosum | 46 |
| Mycobacterium tuberculosis H37Rv | 46 |
| Bacillus subtilis subtilis 168 | 43 |
| Mycobacterium tuberculosis | 33 |
| Pseudomonas fluorescens | 33 |
| Synechocystis sp. PCC 6803 | 33 |
| Methanocaldococcus jannaschii | 31 |
| Catharanthus roseus | 30 |
| Spinacia oleracea | 29 |
| Klebsiella pneumoniae | 28 |
| Klebsiella aerogenes | 27 |
| Hordeum vulgare | 26 |
| Triticum aestivum | 26 |
| Methanosarcina barkeri | 25 |
| Agrobacterium tumefaciens | 25 |
| Bos taurus | 24 |
| Sulfolobus solfataricus | 23 |
| Mycolicibacterium smegmatis | 23 |
| Petunia x hybrida | 21 |
| Corynebacterium glutamicum | 21 |
| Staphylococcus aureus | 21 |
| Methanosarcina thermophila | 20 |
| Sus scrofa | 20 |
| Chlamydomonas reinhardtii | 20 |
| Thermotoga maritima | 19 |
| Methanothermobacter thermautotrophicus | 19 |
| Pseudomonas aeruginosa PAO1 | 19 |
| Aspergillus niger | 19 |
| Brassica napus | 18 |
| Rhodobacter sphaeroides | 18 |
| Rhodobacter capsulatus | 18 |
| Delftia acidovorans | 18 |
| Lactococcus lactis | 18 |
| Mycoplasma pneumoniae M129 | 17 |
| Medicago truncatula | 17 |
| Cucumis sativus | 17 |
| Cupriavidus necator | 17 |
| Paracoccus denitrificans | 16 |
| Aspergillus nidulans | 16 |
| Euglena gracilis | 16 |
| Geobacillus stearothermophilus | 16 |
| Enterococcus faecalis | 16 |
| Cupriavidus sp. PS12 | 15 |
| Pyrococcus furiosus | 15 |
| Allochromatium vinosum | 15 |
| Mammalia | 15 |
| Azotobacter vinelandii | 15 |
| Sinorhizobium meliloti | 15 |
| Clostridium acetobutylicum | 15 |
| Vitis vinifera | 14 |
| Campylobacter jejuni | 14 |
| Ricinus communis | 14 |
| Haloferax volcanii | 14 |
| Cicer arietinum | 14 |
| Streptomyces griseus | 14 |
| Arabidopsis thaliana | 14 |
| Oryza sativa Japonica Group | 14 |
| Mycobacterium bovis | 14 |
| Methanosarcina | 14 |
| Corynebacterium glutamicum ATCC 13032 | 14 |
| Rubrivivax gelatinosus | 14 |
| Neurospora crassa | 14 |
| Streptococcus pneumoniae | 14 |
| Acidithiobacillus ferrooxidans | 13 |
| Chlorobaculum tepidum | 13 |
| Medicago sativa | 13 |
| Bradyrhizobium japonicum | 13 |
| Dianthus caryophyllus | 13 |
| Drosophila melanogaster | 12 |
| Abies grandis | 12 |
| Rhodospirillum rubrum | 12 |
| Pyrococcus horikoshii | 12 |
| Synechococcus sp. PCC 7002 | 12 |
| Archaeoglobus fulgidus | 12 |
| Methanosarcina acetivorans | 12 |
| Burkholderia cepacia | 12 |
| Sinorhizobium meliloti Rm2011 | 12 |
| Serratia marcescens | 12 |
| Capsicum annuum | 12 |
| Synechococcus elongatus PCC 7942 | 12 |
| Cupriavidus pinatubonensis JMP134 | 11 |
| Gallus gallus | 11 |
| Deinococcus radiodurans | 11 |
| Micrococcus luteus | 11 |
| Camellia sinensis | 11 |
| Halobacterium salinarum | 11 |
| Clostridium sporogenes | 11 |
| Phaseolus vulgaris | 11 |
| Vibrio cholerae | 11 |
| Rhodococcus rhodochrous | 11 |
| Methylobacterium extorquens AM1 | 11 |
| Bacillus megaterium | 11 |
| Streptomyces coelicolor A3(2) | 11 |
| Proteus vulgaris | 11 |
| Malus domestica | 11 |
| Lupinus luteus | 11 |
| Lactobacillus casei | 11 |
| Lotus japonicus | 10 |
| Pinus taeda | 10 |
| Pseudomonas putida mt-2 | 10 |
| Thermus thermophilus | 10 |
| Helicobacter pylori | 10 |
| Picea abies | 10 |
| Fusarium fujikuroi | 10 |
| Aquifex aeolicus | 10 |
| Trichormus variabilis | 10 |
| Perilla frutescens | 10 |
| Vigna radiata radiata | 10 |
| Thiobacillus thioparus | 10 |
| Aspergillus fumigatus | 10 |
| Agrobacterium fabrum C58 | 10 |
| Methanosarcina TM-1 | 10 |
| Xanthomonas campestris | 10 |
| Trichoderma reesei | 10 |
| Bacillus cereus | 10 |
| Clostridium pasteurianum | 10 |
| Clostridium acetobutylicum ATCC 824 | 10 |
| Rhodopseudomonas palustris | 10 |
| Glycyrrhiza echinata | 9 |
| Daucus carota | 9 |
| Oryctolagus cuniculus | 9 |
| Citrobacter freundii | 9 |
| Acinetobacter calcoaceticus | 9 |
| Ocimum basilicum | 9 |
| Secale cereale | 9 |
| Sphingomonas sp. SYK6 | 9 |
| Linum usitatissimum | 9 |
| Rosa hybrid cultivar | 9 |
| Petroselinum crispum | 9 |
| Desulfovibrio desulfuricans | 9 |
| Bacteroides fragilis | 9 |
| Salmonella enterica enterica serovar Typhimurium str. LT2 | 9 |
| Cupriavidus necator H16 | 9 |
| Helicobacter pylori 26695 | 9 |
| Sulfolobus tokodaii | 9 |
| Allium cepa | 9 |
| Bordetella pertussis | 9 |
| Solanum habrochaites | 9 |
| Prevotella ruminicola | 9 |
| Glycyrrhiza glabra | 8 |
| Lactuca sativa romaine | 8 |
| Sulfolobus acidocaldarius | 8 |
| Papaver somniferum | 8 |
| Cavia porcellus | 8 |
| Arthrobacter globiformis | 8 |
| Pseudomonas denitrificans (nomen rejiciendum) | 8 |
| Prevotella oralis | 8 |
| Yersinia pseudotuberculosis | 8 |
| Streptomyces fradiae | 8 |
| Comamonas testosteroni | 8 |
| Streptomyces antibioticus | 8 |
| Aspergillus flavus | 8 |
| Nostoc sp. PCC 7120 | 8 |
| Carthamus tinctorius | 8 |
| Bacteroides thetaiotaomicron | 8 |
| Haemophilus influenzae Rd KW20 | 8 |
| Pseudomonas | 8 |
| Acinetobacter sp. ADP1 | 8 |
| Pantoea agglomerans | 8 |
| Azospirillum brasilense | 8 |
| Sinorhizobium meliloti 1021 | 8 |
| Lactobacillus plantarum | 8 |
| Aeromonas hydrophila | 8 |
| Clostridium botulinum | 8 |
| Thauera aromatica | 8 |
| Mycolicibacterium phlei | 8 |
| Fagopyrum esculentum | 8 |
| Pseudomonas sp. P51 | 7 |
| Chlamydia trachomatis | 7 |
| Plasmodium falciparum | 7 |
| Rhodococcus opacus | 7 |
| Avena strigosa | 7 |
| Haemophilus influenzae | 7 |
| Methanococcus maripaludis | 7 |
| Thermococcus kodakarensis | 7 |
| Ruegeria pomeroyi DSS-3 | 7 |
| Thermoplasma acidophilum | 7 |
| Thermus aquaticus | 7 |
| Pseudomonas syringae | 7 |
| Streptomyces clavuligerus | 7 |
| Penicillium chrysogenum | 7 |
| Streptomyces coelicolor | 7 |
| Stenotrophomonas maltophilia | 7 |
| Rhodococcus jostii RHA1 | 7 |
| Nostoc punctiforme | 7 |
| Pinus sylvestris | 7 |
| Artemisia annua | 7 |
| Escherichia coli W | 7 |
| Escherichia coli B | 7 |
| Streptococcus agalactiae | 7 |
| Sorghum bicolor | 7 |
| Gluconobacter oxydans | 7 |
| Streptomyces avermitilis | 7 |
| Moorella thermoacetica | 7 |
| Clostridium beijerinckii | 7 |
| Avena sativa | 7 |
| Panax ginseng | 6 |
| Xanthophyllomyces dendrorhous | 6 |
| Pseudomonas knackmussii | 6 |
| Pseudomonas stutzeri | 6 |
| Aspergillus oryzae | 6 |
| Pseudomonas reinekei | 6 |
| Myxococcus fulvus | 6 |
| Clarkia breweri | 6 |
| Methanococci | 6 |
| Chromobacterium violaceum | 6 |
| Bacillus licheniformis | 6 |
| Hevea brasiliensis | 6 |
| Pimelobacter simplex | 6 |
| Corynebacterium diphtheriae | 6 |
| Ralstonia pickettii | 6 |
| Acidianus ambivalens | 6 |
| Ustilago maydis | 6 |
| Bacillus circulans | 6 |
| Proteus mirabilis | 6 |
| Streptomyces rimosus | 6 |
| Haloarcula marismortui | 6 |
| Mentha x piperita | 6 |
| Brucella abortus | 6 |
| Desulfovibrio vulgaris | 6 |
| Desulfovibrio gigas | 6 |
| Pseudomonas putida KT2440 | 6 |
| Cyberlindnera jadinii | 6 |
| Vicia faba | 6 |
| Shewanella oneidensis MR-1 | 6 |
| Bacteroides vulgatus | 6 |
| Chlorobium limicola | 6 |
| Gloeobacter violaceus | 6 |
| Physcomitrella patens | 6 |
| Mortierella alpina | 6 |
| Acidithiobacillus thiooxidans | 6 |
| Saccharomyces cerevisiae S288C | 6 |
| Yersinia enterocolitica | 6 |
| Paracoccus versutus | 6 |
| Fusarium oxysporum | 6 |
| Ralstonia solanacearum | 6 |
| Bacillus anthracis | 6 |
| Rhizobium leguminosarum | 6 |
| Alcaligenes faecalis | 6 |
| Ipomoea batatas | 6 |
| Pseudomonas sp | 6 |
| Pectobacterium carotovorum | 6 |
| Schizosaccharomyces pombe | 6 |
| Aeromonas caviae | 6 |
| Brassica juncea | 6 |
| Mycobacterium leprae | 6 |
| Oenococcus oeni | 6 |
| Propionibacterium freudenreichii shermanii | 6 |
| Mycobacterium marinum | 5 |
| Delphinium grandiflorum | 5 |
| Rhodopseudomonas palustris CGA009 | 5 |
| Trifolium pratense | 5 |
| Foeniculum vulgare | 5 |
| Methanobacteria | 5 |
| Dahlia pinnata | 5 |
| Pseudomonas nitroreducens | 5 |
| Streptomyces | 5 |
| Thermoproteus tenax | 5 |
| Saccharopolyspora erythraea NRRL 2338 | 5 |
| Micromonospora megalomicea | 5 |
| Pseudomonas protegens Pf-5 | 5 |
| Tetrahymena pyriformis | 5 |
| Aspergillus parasiticus | 5 |
| Thermus thermophilus HB8 | 5 |
| Cucumis melo | 5 |
| Aeropyrum pernix | 5 |
| Pyrococcus abyssi | 5 |
| Lysinibacillus sphaericus | 5 |
| Amanita muscaria | 5 |
| Mycobacterium avium | 5 |
| Prevotella brevis | 5 |
| Microbacterium saperdae | 5 |
| Microbacterium testaceum | 5 |
| Microbacterium lacticum | 5 |
| Microbacterium liquefaciens | 5 |
| Porphyromonas asaccharolytica | 5 |
| Halorubrum saccharovorum | 5 |
| Rhodococcus hoagii | 5 |
| Gordonia rubripertincta | 5 |
| Kitasatospora aureofaciens | 5 |
| Penicillium aethiopicum | 5 |
| Neisseria meningitidis | 5 |
| Brucella melitensis | 5 |
| Synechocystis | 5 |
| Methanothermobacter marburgensis Marburg | 5 |
| Streptomyces hygroscopicus | 5 |
| Desulfotomaculum nigrificans | 5 |
| Streptococcus mutans | 5 |
| Acidiphilium acidophilum | 5 |
| Citrus sinensis | 5 |
| Prevotella melaninogenica | 5 |
| Starkeya novella | 5 |
| Pueraria montana lobata | 5 |
| Ginkgo biloba | 5 |
| Thermococcus kodakarensis KOD1 | 5 |
| Cannabis sativa | 5 |
| Citrus x paradisi | 5 |
| Prochlorococcus marinus pastoris CCMP1986 | 5 |
| Lactococcus lactis cremoris | 5 |
| Methanococcus voltae | 5 |
| Leptospira interrogans | 5 |
| Vibrio harveyi | 5 |
| Lithospermum erythrorhizon | 5 |
| Methanothermobacter thermautotrophicus Delta H | 5 |
| Rhodococcus erythropolis | 5 |
| Clostridium kluyveri | 5 |
| Methylobacillus flagellatus | 5 |
| Pseudomonas chlororaphis chlororaphis | 5 |
| Aspergillus terreus | 5 |
| Dickeya chrysanthemi | 5 |
| Mesorhizobium loti | 5 |
| Zymomonas mobilis | 5 |
| Yarrowia lipolytica | 5 |
| Azoarcus evansii | 5 |
| Datura stramonium | 5 |
| Lupinus albus | 5 |
| Leuconostoc mesenteroides cremoris | 5 |
| Lactobacillus brevis | 5 |
| Propionibacterium freudenreichii | 5 |
| Cutibacterium acnes | 5 |
| Marinomonas mediterranea MMB-1 | 4 |
| Methanosarcina mazei | 4 |
| Zobellia galactanivorans | 4 |
| Humulus lupulus | 4 |
| Methylococcus capsulatus | 4 |
| Manihot esculenta | 4 |
| Agapanthus africanus | 4 |
| Pasteurella multocida | 4 |
| Pinus contorta | 4 |
| Pseudomonas putida U | 4 |
| Alcaligenes sp. O-1 | 4 |
| Methanosarcina mazei Go1 | 4 |
| Ruminiclostridium thermocellum ATCC 27405 | 4 |
| Fusobacterium nucleatum | 4 |
| Bombyx mori | 4 |
| Myxococcus xanthus | 4 |
| Coffea arabica | 4 |
| Pimpinella anisum | 4 |
| Thermosynechococcus elongatus BP-1 | 4 |
| Shewanella putrefaciens | 4 |
| Rhodobacter sphaeroides 2.4.1 | 4 |
| Methanomicrobia | 4 |
| Pseudomonas putida ATCC 17453 | 4 |
| Methanothermus | 4 |
| Salmonella enterica enterica serovar Typhi | 4 |
| Escherichia coli C | 4 |
| Matthiola incana | 4 |
| Klebsiella oxytoca | 4 |
| Cutaneotrichosporon cutaneum | 4 |
| Mycobacterium | 4 |
| Botrytis cinerea | 4 |
| Gossypium hirsutum | 4 |
| Veillonella parvula | 4 |
| Lupinus angustifolius | 4 |
| Haloferax mediterranei | 4 |
| Rhodococcus erythropolis DCL14 | 4 |
| Eschscholzia californica | 4 |
| Coptis japonica | 4 |
| Chromohalobacter salexigens DSM 3043 | 4 |
| Clostridium perfringens | 4 |
| Roseovarius nubinhibens ISM | 4 |
| Clostridium tetanomorphum | 4 |
| Arthrobacter sp | 4 |
| Pseudomonas mendocina | 4 |
| Raphanus sativus | 4 |
| Bilophila wadsworthia RZATAU | 4 |
| Eisenibacter elegans | 4 |
| Chlorobaculum thiosulfatiphilum | 4 |
| Bacillus pumilus | 4 |
| Synechococcus elongatus | 4 |
| Blastochloris viridis | 4 |
| Curtobacterium flaccumfaciens | 4 |
| Microbacterium imperiale | 4 |
| Microbacterium barkeri | 4 |
| Agromyces mediolanus | 4 |
| Bacteroides eggerthii | 4 |
| Bacteroides ovatus | 4 |
| Leifsonia aquatica | 4 |
| Lactobacillus mali | 4 |
| Aminobacter aminovorans | 4 |
| Pseudomonas putida TW3 | 4 |
| Pseudomonas putida F1 | 4 |
| Dictyostelium discoideum | 4 |
| Bacillus thuringiensis | 4 |
| Xanthomonas oryzae | 4 |
| Salinivibrio costicola | 4 |
| Caenorhabditis elegans | 4 |
| Pseudomonas fragi | 4 |
| Serratia plymuthica | 4 |
| Cucurbita maxima | 4 |
| Micrococcus luteus B-P 26 | 4 |
| Arabidopsis thaliana ler | 4 |
| Amycolatopsis mediterranei | 4 |
| Escherichia coli O157:H7 | 4 |
| Aloe arborescens | 4 |
| Fusarium graminearum | 4 |
| Citrus maxima | 4 |
| Musca domestica | 4 |
| Pelobacter acetylenicus | 4 |
| Bacteroides fragilis NCTC 9343 | 4 |
| Chrysosplenium americanum | 4 |
| Nostoc sp. 36 | 4 |
| Arthrospira platensis | 4 |
| Acetobacter aceti | 4 |
| Acetoanaerobium sticklandii | 4 |
| Lotus corniculatus | 4 |
| Pogostemon cablin | 4 |
| Cichorium intybus | 4 |
| Nostoc punctiforme PCC 73102 | 4 |
| Pedobacter heparinus | 4 |
| Aliivibrio fischeri | 4 |
| Ogataea methanolica | 4 |
| [Candida] boidinii | 4 |
| Paracoccus pantotrophus | 4 |
| Xanthobacter autotrophicus Py2 | 4 |
| Xanthobacter | 4 |
| Cupriavidus metallidurans CH34 | 4 |
| Hyphomicrobium zavarzinii ZV580 | 4 |
| Methylobacterium organophilum | 4 |
| Rhizobiaceae | 4 |
| Brevibacillus brevis S1 | 4 |
| Clostridium saccharobutylicum | 4 |
| Paraburkholderia xenovorans LB400 | 4 |
| Atropa belladonna | 4 |
| Solanum pennellii | 4 |
| Anaerotignum propionicum | 4 |
| Pseudoalteromonas phenolica O-BC30 | 3 |
| Pseudoalteromonas luteoviolacea 2ta16 | 3 |
| Allium ampeloprasum | 3 |
| Ascaris suum | 3 |
| Ascaris lumbricoides | 3 |
| Fasciola hepatica | 3 |
| Manduca sexta | 3 |
| Clostridium | 3 |
| Vibrio alginolyticus | 3 |
| Methanohalophilus portucalensis | 3 |
| Methanosarcina acetivorans C2A | 3 |
| Pseudomonas putida AC866 | 3 |
| Ralstonia eutropha JMP222 | 3 |
| Burkholderia sp. RASC | 3 |
| Bradyrhizobium sp. RD5-C2 | 3 |
| Crithidia fasciculata | 3 |
| Rhizophora stylosa | 3 |
| Kandelia candel | 3 |
| Desulfobacterium autotrophicum | 3 |
| Vibrio parahaemolyticus | 3 |
| Limnanthes alba | 3 |
| Berberis wilsoniae | 3 |
| Stigmatella aurantiaca | 3 |
| Mentha spicata | 3 |
| Arabidopsis thaliana Cvi | 3 |
| Camellia ptilophylla | 3 |
| Ruminococcus gnavus ATCC 29149 | 3 |
| Gemmata obscuriglobus | 3 |
| Pseudomonas fluorescens Pf0-1 | 3 |
| Morganella morganii | 3 |
| Penicillium digitatum | 3 |
| Triglochin maritima | 3 |
| Crocus sativus | 3 |
| Pseudomonas putida GB-1 | 3 |
| Phanerochaete chrysosporium | 3 |
| Rhodococcus hoagii 103S | 3 |
| Pantoea ananatis | 3 |
| Nannocystis exedens | 3 |
| Gossypium barbadense | 3 |
| Gossypium arboreum | 3 |
| Pseudomonas sp. PS14 | 3 |
| Xanthobacter flavus 14p1 | 3 |
| Ipomoea nil | 3 |
| Zingiber officinale | 3 |
| Vigna angularis | 3 |
| Vibrio vulnificus CMCP6 | 3 |
| Pseudomonas sp. NT4 | 3 |
| Halorhodospira halochloris | 3 |
| Brevibacterium helvolum | 3 |
| Chromohalobacter salexigens | 3 |
| Pinus strobus | 3 |
| Sphingomonas wittichii RW1 | 3 |
| Pseudomonas alcaligenes NCIMB 9867 | 3 |
| Comamonas testosteroni T-2 | 3 |
| Methylococcus capsulatus Bath | 3 |
| Aromatoleum aromaticum EbN1 | 3 |
| [Haemophilus] ducreyi | 3 |
| Legionella pneumophila | 3 |
| Campylobacter coli | 3 |
| Spodoptera littoralis | 3 |
| Hyoscyamus niger | 3 |
| Eggerthella lenta DSM 2243 | 3 |
| Rosa chinensis | 3 |
| Ruta graveolens | 3 |
| Nicotiana attenuata | 3 |
| Entamoeba histolytica | 3 |
| Limnanthes douglasii | 3 |
| Pseudomonas oleovorans | 3 |
| Methanogenium | 3 |
| Podophyllum peltatum | 3 |
| Linum nodiflorum | 3 |
| Linum flavum | 3 |
| Sesamum indicum | 3 |
| Streptomyces roseochromogenus oscitans | 3 |
| Actinoalloteichus cyanogriseus | 3 |
| Ralstonia sp. U2 | 3 |
| Fusarium solani | 3 |
| Streptomyces venezuelae | 3 |
| Wolinella succinogenes | 3 |
| Saccharopolyspora erythraea | 3 |
| Shewanella sp. ANA-3 | 3 |
| Shewanella oneidensis | 3 |
| Actinidia deliciosa | 3 |
| Bradyrhizobium elkanii | 3 |
| Capra hircus | 3 |
| Populus deltoides | 3 |
| Bifidobacterium longum | 3 |
| Thiobacillus denitrificans | 3 |
| Sporosarcina pasteurii | 3 |
| Aerococcus viridans | 3 |
| Phaseolus lunatus | 3 |
| Pseudomonas putida CBB5 | 3 |
| Hypericum androsaemum | 3 |
| Saccharopolyspora spinosa | 3 |
| Sinopodophyllum hexandrum | 3 |
| Aspergillus versicolor | 3 |
| Salvia officinalis | 3 |
| Taxus cuspidata | 3 |
| Portulaca grandiflora | 3 |
| Petrotoga miotherma | 3 |
| Thalictrum flavum | 3 |
| Mesocricetus auratus | 3 |
| Sulfolobus solfataricus P2 | 3 |
| Nicotiana sylvestris | 3 |
| Pyrobaculum islandicum | 3 |
| Pyrobaculum calidifontis | 3 |
| Sinorhizobium fredii NGR234 | 3 |
| Paracoccus denitrificans NKNIS | 3 |
| Hyphomicrobium sulfonivorans | 3 |
| Aedes aegypti | 3 |
| Aves | 3 |
| Achromobacter xylosoxidans NCIMB 10751 | 3 |
| Phaeodactylum tricornutum | 3 |
| Brassica oleracea | 3 |
| Halococcus saccharolyticus | 3 |
| Sporosarcina ureae | 3 |
| Staphylococcus capitis | 3 |
| Staphylococcus epidermidis | 3 |
| Staphylococcus haemolyticus | 3 |
| Staphylococcus warneri | 3 |
| Porphyromonas levii | 3 |
| Odoribacter splanchnicus | 3 |
| Jonesia denitrificans | 3 |
| Arthrobacter citreus | 3 |
| Brevibacterium fuscum | 3 |
| Glutamicibacter protophormiae | 3 |
| Clavibacter insidiosus | 3 |
| Clavibacter michiganensis | 3 |
| Clavibacter nebraskensis | 3 |
| Clavibacter sepedonicus | 3 |
| Curtobacterium albidum | 3 |
| Curtobacterium citreum | 3 |
| Curtobacterium luteum | 3 |
| Tsukamurella paurometabola | 3 |
| Mycolicibacterium farcinogenes | 3 |
| Mycolicibacterium fortuitum | 3 |
| Mycobacterium intracellulare | 3 |
| Mycobacterium avium paratuberculosis | 3 |
| Gordonia bronchialis | 3 |
| Gordonia terrae | 3 |
| Dermatophilus congolensis | 3 |
| Virgibacillus pantothenticus | 3 |
| Rhodococcus ruber | 3 |
| Corynebacterium flavescens | 3 |
| Pseudomonas sp. CF600 | 3 |
| Comamonas sp. JS765 | 3 |
| Arthrobacter crystallopoietes | 3 |
| Acidovorax citrulli | 3 |
| Rhodococcus YH3-3 | 3 |
| Burkholderia thailandensis | 3 |
| Burkholderia pseudomallei | 3 |
| Burkholderia glumae | 3 |
| Phaeospirillum molischianum | 3 |
| Phaeospirillum fulvum | 3 |
| Chromohalobacter beijerinckii | 3 |
| Streptomyces peucetius caesius | 3 |
| Diaporthe amygdali | 3 |
| Caulobacter vibrioides CB15 | 3 |
| Lycopersicon hirsutum glabratum | 3 |
| Aggregatibacter actinomycetemcomitans | 3 |
| Streptomyces bikiniensis | 3 |
| Candida albicans | 3 |
| Amycolatopsis lactamdurans | 3 |
| Acremonium chrysogenum | 3 |
| Pelomonas saccharophila | 3 |
| Streptococcus thermophilus | 3 |
| Thiobacillus sp. W5 | 3 |
| Silene dioica | 3 |
| Scutellaria baicalensis | 3 |
| Chlorobium phaeobacteroides DSM 266 | 3 |
| Chlorobium phaeobacteroides BS1 | 3 |
| Chlorobaculum limnaeum | 3 |
| Nocardioides sp. JS614 | 3 |
| Parabacteroides distasonis | 3 |
| Fagopyrum tataricum | 3 |
| Citrus unshiu | 3 |
| Cyanidium caldarium | 3 |
| Actinidia chinensis | 3 |
| Allium sativum | 3 |
| Petrotoga mobilis | 3 |
| Clostridioides difficile | 3 |
| Caldanaerobacter subterraneus tengcongensis | 3 |
| Rebecca salina | 3 |
| Pavlova sp. CCMP459 | 3 |
| Isochrysis galbana | 3 |
| Cyanothece sp. ATCC 51142 | 3 |
| Trichormus variabilis ATCC 29413 | 3 |
| Aspergillus fischeri | 3 |
| Epichloe festucae | 3 |
| Treponema denticola | 3 |
| Giardia intestinalis | 3 |
| Methanobacterium bryantii | 3 |
| Apis mellifera | 3 |
| Limonium latifolium | 3 |
| Flammulina velutipes | 3 |
| Aspergillus rugulosus | 3 |
| Vibrio cholerae O1 | 3 |
| Porphyromonas gingivalis | 3 |
| Aphanothece halophytica | 3 |
| Campylobacter jejuni jejuni NCTC 11168 = ATCC 700819 | 3 |
| Hypericum perforatum | 3 |
| Metallosphaera sedula | 3 |
| Acetobacterium woodii | 3 |
| Juglans regia | 3 |
| Clostridium butyricum | 3 |
| Mycolicibacterium vaccae | 3 |
| Methylosinus trichosporium OB3b | 3 |
| Komagataeibacter xylinus | 3 |
| Bacillus methanolicus | 3 |
| Mycobacterium gastri MN19 | 3 |
| Ogataea angusta | 3 |
| Komagataella pastoris | 3 |
| Candida methanolovescens | 3 |
| Methylocystis pyriformis | 3 |
| Methylocystis parvus | 3 |
| Methylocystis minimus | 3 |
| Methylocystis echinoides | 3 |
| Methylobacter whittenburyi | 3 |
| Rhodomicrobium vannielii | 3 |
| Xanthomonas arboricola | 3 |
| Clostridium formicaceticum | 3 |
| Pseudomonas sp. NCIB9816-4 | 3 |
| Aspergillus aculeatus | 3 |
| Oryza sativa Japonica Group cultivar Nipponbare | 3 |
| Ovis aries | 3 |
| Sinomonas atrocyanea | 3 |
| Burkholderia cenocepacia J2315 | 3 |
| Dickeya dadantii 3937 | 3 |
| Pediococcus pentosaceus | 3 |
| Lactobacillus helveticus | 3 |
| Danio rerio | 3 |
| Salmonella enterica | 3 |
| Camellia sinensis assamica | 3 |
| Thermococcus litoralis | 3 |
| Crassostrea gigas | 3 |
| Enterococcus faecium | 3 |
| Populus trichocarpa | 3 |
| Xanthobacter autotrophicus | 3 |
| Leuconostoc mesenteroides | 3 |
| Leuconostoc lactis | 3 |
| Acidipropionibacterium acidipropionici | 3 |
| Pelobacter propionicus | 3 |
| Desulfobulbus propionicus | 3 |
| Populus nigra | 2 |
| Clostridium cylindrosporum | 2 |
| Gottschalkia acidurici | 2 |
| Amorpha fruticosa | 2 |
| Thioalkalivibrio thiocyanoxidans ARh 4 | 2 |
| Allium victorialis | 2 |
| Allium ochotense | 2 |
| Allium chinense | 2 |
| Allium ascalonicum | 2 |
| Allium altyncolicum | 2 |
| Allium altaicum | 2 |
| Allium aflatunense | 2 |
| Hormoscilla spongeliae SP12 | 2 |
| Stellaria media | 2 |
| Corynebacterium glutamicum R | 2 |
| Pseudomonas citronellolis | 2 |
| Bifidobacterium longum SBT2928 | 2 |
| Comamonas testosteroni TA441 | 2 |
| Escherichia coli K-12 substr. MG1656 | 2 |
| Archaea | 2 |
| Vibrio vulnificus | 2 |
| Vibrio alginolyticus NBRC 15630 = ATCC 17749 | 2 |
| Santalum album | 2 |
| Trichoderma brevicompactum | 2 |
| Trichoderma arundinaceum | 2 |
| Zingiber zerumbet | 2 |
| Solenostemon scutellarioides | 2 |
| Fusarium sporotrichioides | 2 |
| Mytilus edulis | 2 |
| Arenicola marina | 2 |
| Bifidobacterium bifidum | 2 |
| Bifidobacterium animalis lactis | 2 |
| Bifidobacterium adolescentis | 2 |
| Persephonella marina | 2 |
| Sporomusa ovata | 2 |
| Streptomyces maritimus | 2 |
| Anchusa officinalis | 2 |
| Ralstonia eutropha NH9 | 2 |
| Xanthomonas sp. 35Y | 2 |
| Pseudoalteromonas carrageenovora | 2 |
| Gottschalkia purinilyticum | 2 |
| Bruguiera gymnorhiza | 2 |
| Betula platyphylla japonica | 2 |
| Gentiana straminea | 2 |
| Hypericum calycinum | 2 |
| Corallococcus coralloides | 2 |
| Adiantum capillus-veneris | 2 |
| Physaria kathryn | 2 |
| Physaria lindheimeri | 2 |
| Physaria fendleri | 2 |
| Asclepias syriaca | 2 |
| Peptoniphilus asaccharolyticus | 2 |
| Clostridium cochlearium | 2 |
| Citrobacter amalonaticus | 2 |
| Leucaena leucocephala | 2 |
| Hydrogenobacter thermophilus | 2 |
| Corydalis vaginans | 2 |
| Sanguinaria canadensis | 2 |
| Argemone mexicana | 2 |
| Acidovorax facilis | 2 |
| Achromobacter ruhlandii | 2 |
| Neisseria meningitidis Z2491 | 2 |
| Neisseria gonorrhoeae MS11 | 2 |
| Neisseria gonorrhoeae FA 1090 | 2 |
| Mycobacterium africanum | 2 |
| Pseudobacteroides cellulosolvens | 2 |
| Ruminococcus albus | 2 |
| Ruminiclostridium thermocellum | 2 |
| [Clostridium] papyrosolvens | 2 |
| [Clostridium] josui | 2 |
| Clostridium cellulovorans | 2 |
| [Clostridium] cellulolyticum | 2 |
| Acetivibrio cellulolyticus | 2 |
| Panax notoginseng | 2 |
| Nitrosospira multiformis | 2 |
| Nitrosococcus oceani | 2 |
| Antirrhinum majus | 2 |
| Lepidium sativum | 2 |
| Klebsiella oxytoca TauN1 | 2 |
| Desulfonispora thiosulfatigenes GKNTAU | 2 |
| Castellaniella denitrificans | 2 |
| Camellia irrawadiensis | 2 |
| Marinomonas sp. MWYL1 | 2 |
| Marinomonas sp. MED121 | 2 |
| Emiliania huxleyi | 2 |
| Pyrococcus woesei | 2 |
| Plesiocystis pacifica | 2 |
| Methylosphaera hansonii | 2 |
| Methylomicrobium alcaliphilum 20Z | 2 |
| Enhygromyxa salina | 2 |
| Digitalis | 2 |
| Digitalis lanata | 2 |
| Digitalis purpurea | 2 |
| Agrobacterium sp. DSM 8888 | 2 |
| Pseudomonas sp. AK-1 | 2 |
| Astragalus mongholicus | 2 |
| Thiobacillus thioparus TK-m | 2 |
| Calendula officinalis | 2 |
| Streptococcus sanguinis | 2 |
| Streptococcus salivarius | 2 |
| Trichomonas vaginalis | 2 |
| Vigna radiata | 2 |
| Vibrio albensis | 2 |
| Oceanimonas doudoroffii | 2 |
| Gardenia jasminoides | 2 |
| Achromobacter denitrificans | 2 |
| Pseudomonas putida 77 | 2 |
| Bixa orellana | 2 |
| Cyclotella meneghiniana | 2 |
| Aurantimonas manganoxydans SI85-9A1 | 2 |
| Brevundimonas sp. SD212 | 2 |
| Rhodococcus sp. SQ1 | 2 |
| Streptomyces sp. SA-COO | 2 |
| Aspergillus terricola | 2 |
| Adonis aestivalis palaestina | 2 |
| Mycobacterium lacticola | 2 |
| Streptomyces griseus griseus NBRC 13350 | 2 |
| Chlorobaculum tepidum TLS | 2 |
| Photobacterium leiognathi leiognathi | 2 |
| Staphylococcus xylosus | 2 |
| Rhodococcus sp. strain MS11 | 2 |
| Vibrio furnissii | 2 |
| Vibrio cholerae O1 biovar El Tor str. N16961 | 2 |
| Vibrio cholerae non-O1 | 2 |
| Sinningia cardinalis | 2 |
| Clitoria ternatea | 2 |
| Salvia splendens | 2 |
| Glandularia x hybrida | 2 |
| Gentiana triflora | 2 |
| Curcuma longa | 2 |
| Mesembryanthemum crystallinum | 2 |
| Paenibacillus polymyxa | 2 |
| Paenibacillus macerans | 2 |
| Periplaneta americana | 2 |
| Lens culinaris | 2 |
| Thunbergia alata | 2 |
| Thermotoga neapolitana | 2 |
| Methylobacterium extorquens | 2 |
| Treponema pallidum | 2 |
| Chlamydia pneumoniae | 2 |
| Borreliella burgdorferi | 2 |
| Dechloromonas aromatica | 2 |
| Desulfitobacterium hafniense | 2 |
| Desulfovibrio multispirans | 2 |
| Thermodesulfobacterium commune | 2 |
| Rhizobium leguminosarum bv. viciae | 2 |
| Plasmodium falciparum 3D7 | 2 |
| Halomonas elongata DSM 2581 | 2 |
| Ideonella sakaiensis | 2 |
| Xanthomonas axonopodis | 2 |
| Cytophaga hutchinsonii | 2 |
| Leptospira borgpetersenii | 2 |
| Chlamydia muridarum | 2 |
| Chlamydia felis | 2 |
| Chlamydia caviae | 2 |
| Chlamydia abortus | 2 |
| Burkholderia sp. JS667 | 2 |
| Ralstonia sp. JS668 | 2 |
| Sphingobium fuliginis | 2 |
| Pseudomonas sp. CA10 | 2 |
| Pseudomonas putida NCIB 9869 | 2 |
| Acinetobacter | 2 |
| Rhodococcus sp. NCIMB 12038 | 2 |
| Candidatus Methylomirabilis oxyfera | 2 |
| Rhodotorula glutinis | 2 |
| Fragaria | 2 |
| Melilotus albus | 2 |
| Daphne odora | 2 |
| Listeria innocua | 2 |
| Brevundimonas vesicularis | 2 |
| Neisseriaceae | 2 |
| Sorbus aucuparia | 2 |
| Methylovorus mays | 2 |
| Methyloversatilis universalis | 2 |
| Methylocella silvestris | 2 |
| Rhizobium leguminosarum bv. trifolii | 2 |
| Chloroflexus aurantiacus J-10-fl | 2 |
| Vigna aconitifolia | 2 |
| Hyoscyamus albus | 2 |
| Bacillus lentus | 2 |
| Saccharum officinarum | 2 |
| Coffea canephora | 2 |
| Aspergillus sp. MF297-2 | 2 |
| Archaeoglobus fulgidus 7324 | 2 |
| Vanilla planifolia | 2 |
| Penicillium cyclopium | 2 |
| Anemone leveillei | 2 |
| Capsicum chinense | 2 |
| Paenarthrobacter nicotinovorans | 2 |
| Yersinia pestis | 2 |
| Persea americana | 2 |
| Acinetobacter baumannii | 2 |
| Coreopsis grandiflora | 2 |
| Pseudomonas putida HS12 | 2 |
| Pseudomonas pseudoalcaligenes JS45 | 2 |
| Comamonas testosteroni CNB-1 | 2 |
| Aliivibrio salmonicida LFI1238 | 2 |
| Pseudomonas chlororaphis B23 | 2 |
| Streptomyces pilosus | 2 |
| Canavalia lineata | 2 |
| Canavalia ensiformis | 2 |
| Acinetobacter sp. NCIMB9871 | 2 |
| Methanospirillum | 2 |
| Methanopyri | 2 |
| Methanoculleus | 2 |
| Methanothermobacter marburgensis | 2 |
| Cyberlindnera mrakii | 2 |
| Salmonella enterica enterica serovar Agona | 2 |
| Shewanella sp. MR-7 | 2 |
| Shewanella sp. MR-4 | 2 |
| Linum perenne | 2 |
| Sesamum radiatum | 2 |
| Saussurea medusa | 2 |
| Apium graveolens | 2 |
| Methylophilus methylotrophus W3A1 | 2 |
| Methylophaga thalassica | 2 |
| Methylomonas sp. J | 2 |
| Sulfolobus acidocaldarius DSM 639 | 2 |
| Micromonospora carbonacea | 2 |
| Micromonospora griseorubida | 2 |
| Streptomyces sp. WA46 | 2 |
| Pseudomonas stutzeri AN10 | 2 |
| Pseudomonas putida PpG7 | 2 |
| Streptomyces rishiriensis | 2 |
| Nocardia | 2 |
| Aquifex pyrophilus | 2 |
| Thermoanaerobacterium thermosaccharolyticum | 2 |
| Fragaria x ananassa | 2 |
| Aspergillus stellatus | 2 |
| Brassica oleracea botrytis | 2 |
| Equisetum arvense | 2 |
| Thiocapsa roseopersicina | 2 |
| Pseudomonas aeruginosa PA14 | 2 |
| Streptococcus pasteurianus | 2 |
| Kocuria rosea | 2 |
| Fischerella ambigua UTEX 1903 | 2 |
| Coix lacryma-jobi | 2 |
| Aphelandra squarrosa | 2 |
| Enterococcus casseliflavus | 2 |
| Pseudomonas sp. WBC-3 | 2 |
| Pseudomonas sp. A3 | 2 |
| Pseudomonas sp. 1-7 | 2 |
| Persicaria tinctoria | 2 |
| Strobilanthes cusia | 2 |
| Penicillium paxilli ATCC 26601 | 2 |
| Penicillium paxilli | 2 |
| Arabidopsis | 2 |
| Cryptosporidium parvum | 2 |
| Anthriscus sylvestris | 2 |
| Croton stellatopilosus | 2 |
| Cistus creticus | 2 |
| Taxus wallichiana chinensis | 2 |
| Oryza sativa Indica Group | 2 |
| Stevia rebaudiana | 2 |
| Selenomonas ruminantium | 2 |
| Meyerozyma guilliermondii | 2 |
| Castellaniella defragrans | 2 |
| Pseudomonas sp. gs1 | 2 |
| Burkholderia gladioli | 2 |
| Galium mollugo | 2 |
| Beta vulgaris | 2 |
| Celosia cristata | 2 |
| Rubrobacter xylanophilus | 2 |
| Rhodothermus marinus | 2 |
| Berberis stolonifera | 2 |
| Oncorhynchus mykiss | 2 |
| Halomonas elongata | 2 |
| Clostridium perfringens 13 | 2 |
| Pyrobaculum aerophilum | 2 |
| Pyrobaculum neutrophilum | 2 |
| Hyperthermus butylicus | 2 |
| Chlorella sp. (Roon 68) | 2 |
| Sinorhizobium fredii | 2 |
| Cryptomeria japonica | 2 |
| Asparagus officinalis | 2 |
| Hyphomicrobium sp. S | 2 |
| Hyphomicrobium sp. EG | 2 |
| Halobacterium salinarum NRC-1 | 2 |
| Pseudarthrobacter sulfonivorans | 2 |
| Arthrobacter methylotrophus | 2 |
| Paracoccus denitrificans PD1222 | 2 |
| Pseudomonas sp. NCIB 8858 | 2 |
| Klebsiella michiganensis M5al | 2 |
| Sporobolus alterniflorus | 2 |
| Halobacteria | 2 |
| Desulfuromonas acetoxidans | 2 |
| Bacillus alcalophilus | 2 |
| Domibacillus aminovorans | 2 |
| Bacillus amyloliquefaciens | 2 |
| Bacillus badius | 2 |
| Bacillus coagulans | 2 |
| Bacillus firmus | 2 |
| Psychrobacillus insolitus | 2 |
| Bacillus psychrosaccharolyticus | 2 |
| Bacillus racemilacticus | 2 |
| Sporolactobacillus inulinus | 2 |
| Brochothrix thermosphacta | 2 |
| Listeria grayi | 2 |
| Staphylococcus cohnii | 2 |
| Staphylococcus hominis | 2 |
| Staphylococcus saprophyticus | 2 |
| Staphylococcus simulans | 2 |
| Exiguobacterium acetylicum | 2 |
| Bacillus halotolerans | 2 |
| Prevotella intermedia | 2 |
| Mastigocladus laminosus | 2 |
| Desmonostoc muscorum | 2 |
| Pseudarthrobacter polychromogenes | 2 |
| Cellulomonas biazotea | 2 |
| Mycobacterium kansasii | 2 |
| Actinopolyspora halophila | 2 |
| Alcaligenes faecalis M3A | 2 |
| Rathayibacter iranicus | 2 |
| Rathayibacter tritici | 2 |
| Actinomyces bovis | 2 |
| Nocardiopsis dassonvillei | 2 |
| Halorubrum trapanicum | 2 |
| Halococcus morrhuae | 2 |
| Glutamicibacter nicotianae | 2 |
| Paenarthrobacter ureafaciens | 2 |
| Brevibacterium linens | 2 |
| Burkholderia terrae KU-15 | 2 |
| Staphylococcus sciuri sciuri | 2 |
| Staphylococcus lentus | 2 |
| Haemophilus parainfluenzae | 2 |
| Capnocytophaga sputigena | 2 |
| Capnocytophaga ochracea | 2 |
| Capnocytophaga gingivalis | 2 |
| Felis catus | 2 |
| Bordetella sp. 10d | 2 |
| Acidovorax sp. JS42 | 2 |
| Pseudomonas mevalonii | 2 |
| Pseudomonas putida ORC | 2 |
| Pseudomonas sp. ADP | 2 |
| Herbaspirillum huttiense strain NRRL B-12228 | 2 |
| Galleria mellonella | 2 |
| Azoarcus sp. T | 2 |
| Streptomyces rimosus rimosus ATCC 10970 | 2 |
| Pseudomonas mendocina (pWWO) or (pTOL) | 2 |
| Pseudomonas putida NCIMB 9866 | 2 |
| Pseudoalteromonas luteoviolacea | 2 |
| Streptomyces triostinicus | 2 |
| Streptomyces lasaliensis | 2 |
| Streptomyces griseovariabilis bandungensis | 2 |
| Micromonospora sp. ACM2-092 | 2 |
| Micromonospora sp. ML1 | 2 |
| Streptomyces anulatus | 2 |
| Streptomyces lavendulae | 2 |
| Fusarium heterosporum | 2 |
| Aureobasidium pullulans | 2 |
| Trypanosoma brucei | 2 |
| Desmodium uncinatum | 2 |
| Streptomyces albus | 2 |
| Clostridium botulinum A str. ATCC 19397 | 2 |
| Cyberlindnera saturnus | 2 |
| Streptomyces olivaceus | 2 |
| Xanthomonas citri | 2 |
| Halorhodospira halophila | 2 |
| Acinetobacter calcoaceticus anitratus | 2 |
| [Pseudomonas] geniculata | 2 |
| Halomonas halodenitrificans | 2 |
| Halomonas halmophila | 2 |
| Acetobacter pasteurianus | 2 |
| Streptomyces peucetius | 2 |
| Phaseolus coccineus | 2 |
| Ustilago sphaerogena | 2 |
| Ustilago cynodontis | 2 |
| Streptomyces argillaceus | 2 |
| Gluconobacter cerinus | 2 |
| Gluconobacter albidus | 2 |
| Streptomyces chrestomyceticus | 2 |
| Edwardsiella tarda | 2 |
| Escherichia coli K-12 | 2 |
| Streptomyces lincolnensis | 2 |
| Pseudomonas savastanoi pv. phaseolicola | 2 |
| Vibrio cholerae O139 | 2 |
| Escherichia coli | 2 |
| Streptomyces venezuelae ATCC 10712 | 2 |
| Aneurinibacillus thermoaerophilus L420-91 | 2 |
| Streptomyces arginensis | 2 |
| Acer pseudoplatanus | 2 |
| Burkholderia plantarii | 2 |
| Arabidopsis lyrata | 2 |
| Streptomyces sp. FR-008 | 2 |
| Desulfovibrio sulfodismutans | 2 |
| Desulfocapsa sulfexigens | 2 |
| Musa acuminata | 2 |
| [Nectria] haematococca | 2 |
| Magnolia grandiflora | 2 |
| Rhus typhina | 2 |
| Pseudomonas chlororaphis aureofaciens 30-84 | 2 |
| Burkholderia lata | 2 |
| Citrus aurantium | 2 |
| Bacteroides vulgatus ATCC 8482 | 2 |
| Fusarium verticillioides | 2 |
| Rubus idaeus | 2 |
| Rheum palmatum | 2 |
| Polygonum cuspidatum | 2 |
| Prochlorococcus marinus | 2 |
| Beauveria bassiana | 2 |
| Aspergillus niger ATCC 1015 | 2 |
| Thermithiobacillus tepidarius | 2 |
| Pseudaminobacter salicylatoxidans | 2 |
| Annwoodia aquaesulis | 2 |
| Advenella mimigardefordensis | 2 |
| Staphylococcus aureus aureus ATCC 25923 | 2 |
| Silene latifolia | 2 |
| Citrus japonica | 2 |
| Aquifex aeolicus VF5 | 2 |
| Gerbera hybrid cultivar | 2 |
| Aspergillus japonicus | 2 |
| Botryococcus braunii | 2 |
| Populus tremula x Populus tremuloides | 2 |
| Thauera butanivorans | 2 |
| Bacteroides thetaiotaomicron VPI-5482 | 2 |
| Rhodovulum sulfidophilum | 2 |
| Pelobacter carbinolicus | 2 |
| Pseudomonas sp. HR199 | 2 |
| Sesbania rostrata | 2 |
| Quercus robur | 2 |
| Flaveria bidentis | 2 |
| Eustoma exaltatum russellianum | 2 |
| Bacillus subtilis spizizenii W23 | 2 |
| Trichodesmium erythraeum | 2 |
| Pinus densiflora | 2 |
| Glebionis segetum | 2 |
| Listeria monocytogenes | 2 |
| Geminocystis herdmanii PCC 6308 | 2 |
| Synechococcus elongatus PCC 6301 | 2 |
| Prochlorococcus marinus MIT 9313 | 2 |
| Gloeobacter violaceus PCC 7421 | 2 |
| Cyanothece sp. PCC 7425 | 2 |
| Ophiorrhiza pumila | 2 |
| Ophiorrhiza japonica | 2 |
| Nothapodytes nimmoniana | 2 |
| Camptotheca acuminata | 2 |
| Trypanosoma cruzi | 2 |
| Solidago canadensis | 2 |
| Claviceps purpurea | 2 |
| Trichophyton benhamiae | 2 |
| Tanacetum parthenium | 2 |
| Rauvolfia serpentina | 2 |
| Methanospirillum hungatei | 2 |
| Methanococcus aeolicus | 2 |
| Methanobrevibacter smithii | 2 |
| Methanobrevibacter arboriphilus | 2 |
| Leptospira interrogans serovar Lai str. 56601 | 2 |
| Leptospira interrogans serovar Bataviae | 2 |
| Ignicoccus hospitalis | 2 |
| Lachancea kluyveri | 2 |
| Brevibacillus agri | 2 |
| Thermoanaerobacter brockii | 2 |
| Hapsidospora irregularis | 2 |
| Astragalus bisulcatus | 2 |
| Astragalus | 2 |
| Streptococcus pyogenes | 2 |
| Pectobacterium carotovorum carotovorum | 2 |
| Lavandula angustifolia | 2 |
| Corynebacterium sp | 2 |
| Impatiens balsamina | 2 |
| Penicillium glabrum | 2 |
| Rubia tinctorum | 2 |
| Eubacterium limosum | 2 |
| Acetobacterium carbinolicum | 2 |
| Chloroflexus aurantiacus | 2 |
| Mycolicibacterium smegmatis MC2 155 | 2 |
| Ectocarpus siliculosus | 2 |
| Helianthus tuberosus | 2 |
| Amycolatopsis methanolica | 2 |
| Methylomonas aminofaciens 77a | 2 |
| Methylosinus trichosporium | 2 |
| Methylosinus sporium | 2 |
| Trichoderma viride | 2 |
| Thermobifida fusca | 2 |
| Streptomyces parvulus | 2 |
| Aspergillus awamori | 2 |
| Sulfolobus tokodaii 7 | 2 |
| Burkholderia pyrrocinia | 2 |
| Azospirillum lipoferum | 2 |
| Hyphomicrobium methylovorum GM2 | 2 |
| Blautia producta | 2 |
| Pseudohyphozyma bogoriensis | 2 |
| Rhizobium phaseoli | 2 |
| Zea mays mays | 2 |
| Brassica rapa | 2 |
| Salmonella enterica enterica serovar Typhimurium str. 14028S | 2 |
| Erwinia chrysanthemi EC16 | 2 |
| Erwinia amylovora | 2 |
| Neocallimastix sp. LM-2 | 2 |
| Raoultella terrigena | 2 |
| Lactococcus lactis lactis bv. diacetylactis | 2 |
| Candida tropicalis | 2 |
| Candida maltosa | 2 |
| Escherichia coli CFT073 | 2 |
| Cupriavidus basilensis | 2 |
| Campylobacter jejuni jejuni 81116 | 2 |
| Theobroma cacao | 2 |
| Pseudomonas sp. KB 740 | 2 |
| Pseudomonas Sp. K172 | 2 |
| Moorea producens | 2 |
| Weissella viridescens | 2 |
| Lactococcus lactis lactis | 2 |
| Burkholderia sp. WS | 2 |
| Sphingobium chlorophenolicum | 2 |
| Dehalococcoides mccartyi | 2 |
| Mycobacterium tuberculosis CDC1551 | 2 |
| Beta vulgaris vulgaris | 2 |
| Simmondsia chinensis | 2 |
| Megasphaera elsdenii | 2 |
| Lactobacillus reuteri | 2 |
| Lactobacillus fermentum | 2 |
| Lactobacillus buchneri | 2 |
| Clostridium SB4 | 1 |
| Clostridium subterminale | 1 |
| Clostridium peptidivorans | 1 |
| Cucurbita pepo Early Prolific Straightneck | 1 |
| Aquilegia vulgaris | 1 |
| Tritrichomonas suis | 1 |
| Phytomonas | 1 |
| Leishmania mexicana | 1 |
| Leishmania infantum | 1 |
| Mycoplasma pneumoniae | 1 |
| [Clostridium] symbiosum | 1 |
| [Clostridium] sporosphaeroides | 1 |
| Acidaminococcus fermentans | 1 |
| Sulfurimonas denitrificans | 1 |
| Desulfobacter hydrogenophilus | 1 |
| Candidatus Arcobacter sulfidicus | 1 |
| Lachnospiraceae bacterium 19gly4 | 1 |
| Thermincola potens JR | 1 |
| Methanosarcina barkeri Fusaro | 1 |
| Methanohalophilus mahii DSM 5219 | 1 |
| Methanohalobium evestigatum Z-7303 | 1 |
| Methanococcoides burtonii DSM 6242 | 1 |
| Desulfitobacterium hafniense DCB-2 | 1 |
| Bilophila wadsworthia 3_1_6 | 1 |
| Acetohalobium arabaticum DSM 5501 | 1 |
| Sipunculus nudus | 1 |
| Mytilus trossulus | 1 |
| Mytilus galloprovincialis | 1 |
| Mytilus californianus | 1 |
| Corbicula japonica | 1 |
| Tephrosia vogelii | 1 |
| Derris elliptica | 1 |
| Pythium irregulare | 1 |
| Phytophthora cactorum | 1 |
| Paecilomyces sp. (in: Eurotiomycetes) | 1 |
| Microbacterium sp | 1 |
| Allium tuberosum | 1 |
| Labrenzia aggregata | 1 |
| Prochloron didemni P2-Fiji | 1 |
| Allium ursinum | 1 |
| Allium schoenoprasum | 1 |
| Allium nutans | 1 |
| Allium fistulosum | 1 |
| Cucurbita pepo | 1 |
| Allium cepa aggregatum | 1 |
| Cerastium arvense | 1 |
| Passiflora edulis | 1 |
| Petiveria alliacea | 1 |
| Trypanosoma vivax | 1 |
| Trypanosoma brucei brucei | 1 |
| Allium siculum | 1 |
| Pseudomonas putida SQ1 | 1 |
| Arthrobacter sp. TMP-1 | 1 |
| Thermosynechococcus elongatus | 1 |
| Ruminococcus sp. PO1-3 | 1 |
| Psychrobacter urativorans | 1 |
| Populus alba | 1 |
| Pinus sabiniana | 1 |
| Pinus ponderosa | 1 |
| Teleostei | 1 |
| Physarum polycephalum | 1 |
| Tyria jacobaeae | 1 |
| Apantesis nevadensis geneura | 1 |
| Estigmene acrea | 1 |
| Diacrisia sannio | 1 |
| Arctia caja | 1 |
Drosophila |
1 | |
| Raoultella planticola | 1 |
| Lactobacillus sp. 30A | 1 |
| Tetragenococcus muriaticus | 1 |
| Photobacterium damselae | 1 |
| Pediococcus parvulus | 1 |
| Bromus inermis | 1 |
| Dugesia japonica | 1 |
| Helicobacter pylori DMS 6709 | 1 |
| Neisseria gonorrhoeae | 1 |
| Helicobacter bizzozeronii CIII-1 | 1 |
| Senecio vernalis | 1 |
| Senecio vulgaris | 1 |
| Rhodococcus sp. C1 | 1 |
| Clostridium paraputrificum D 762-06 | 1 |
| Clostridium innocuum D1144/3 | 1 |
| Blautia producta K 2/25.1 | 1 |
| Clostridium sp. ATCC 29733 | 1 |
| Penicillium digitatum ATCC 201167 | 1 |
| [Clostridium] scindens ATCC 35704 | 1 |
| [Clostridium] hylemonae DSM 15053 | 1 |
| Clostridium sp. TO-931 | 1 |
| [Clostridium] scindens | 1 |
| Pseudomonas sp. NCIB 10590 | 1 |
| Mycobacterium sp. NRRL B-3683 | 1 |
| Mycobacterium sp. NRRL B-3805 | 1 |
| Mycolicibacterium neoaurum VKM Ac-1815D | 1 |
| Fusarium graminearum 70E1 | 1 |
| Fusarium graminearum GZ3639 | 1 |
| Santalum austrocaledonicum | 1 |
| Santalum spicatum | 1 |
| Pleurotus sapidus | 1 |
| Zea mays huehuetenangensis | 1 |
| Zea mays mexicana | 1 |
| Zea mays parviglumis | 1 |
| Syzygium aromaticum | 1 |
| Zea luxurians | 1 |
| Fusarium graminearum 88-1 | 1 |
| Fusarium graminearum 79A1 | 1 |
| Cupressus | 1 |
| Eukaryota | 1 |
| Citrus x microcarpa | 1 |
| Hyoscyamus muticus | 1 |
| Methylobacillus flagellatus KT | 1 |
| Aquilaria crassna | 1 |
| Gyrinops | 1 |
| Picea sitchensis | 1 |
| Magnolia | 1 |
| Melissa officinalis | 1 |
| Eucalyptus piperita | 1 |
| Atractylodes lancea | 1 |
| Hedychium | 1 |
| Guatteria friesiana | 1 |
| Guatteria blepharophylla | 1 |
| Guatteria hispida | 1 |
| Magnolia obovata | 1 |
| Prunella vulgaris | 1 |
| Trichinella spiralis | 1 |
| Syngamus trachea | 1 |
| Stephanurus dentatus | 1 |
| Moniezia expansa | 1 |
| Haemonchus contortus | 1 |
| Dictyocaulus viviparus | 1 |
| Lymnaea stagnalis | 1 |
| Methanopyrus kandleri AV19 | 1 |
| Populus | 1 |
| Cydia pomonella | 1 |
| Aspergillus clavatus | 1 |
| Desulfocapsa thiozymogenes | 1 |
| Desulfocapsa | 1 |
| Desulfobulbus | 1 |
| Ips pini | 1 |
| Ips paraconfusus | 1 |
| Ips confusus | 1 |
| Picrophilus torridus | 1 |
| Acidianus tengchongensis | 1 |
| Acidianus brierleyi | 1 |
| Acidianus | 1 |
| Schistocerca gregaria | 1 |
| Faxonius limosus | 1 |
| Marsupenaeus japonicus | 1 |
| Carcinus maenas | 1 |
| Bemisia tabaci | 1 |
| Rhyparobia maderae | 1 |
| Nauphoeta cinerea | 1 |
| Locusta migratoria | 1 |
| Diploptera punctata | 1 |
| Cyperus iria | 1 |
| Byrsotria fumigata | 1 |
| Blatta orientalis | 1 |
| Blaberus giganteus | 1 |
| Blaberus discoidalis | 1 |
| Tellima grandiflora | 1 |
| Neonothopanus nambi | 1 |
| Neonothopanus gardneri | 1 |
| Mycena chlorophos | 1 |
| Renilla reniformis | 1 |
| Renilla muelleri | 1 |
| Ectothiorhodospira shaposhnikovii | 1 |
| Photobacterium phosphoreum | 1 |
| Aequorea victoria | 1 |
| Aequorea aequorea | 1 |
| Pyrocystis noctiluca | 1 |
| Pyrocystis lunula | 1 |
| Pyrocystis fusiformis | 1 |
| Protoperidinium depressum | 1 |
| Noctiluca scintillans | 1 |
| Lingulodinium polyedra | 1 |
| Alexandrium tamarense | 1 |
| Watasenia scintillans | 1 |
| Photinus pyralis | 1 |
| Luciola mingrelica | 1 |
| Aquatica lateralis | 1 |
| Anthracobia melaloma | 1 |
| Peziza ostracoderma | 1 |
| Morchella vulgaris | 1 |
| Morchella costata | 1 |
| Gracilariopsis longissima | 1 |
| Gracilariopsis lemaneiformis | 1 |
| Thermococcus onnurineus | 1 |
| Mycobacterium sp. HL 4-NT-1 | 1 |
| Haloferax sp. D1227 | 1 |
| Agrobacterium radiobacter S2 | 1 |
| Hydrogenophaga intermedia | 1 |
| Comamonas testosteroni KF-1 | 1 |
Phialophora |
1 | |
| Komagataella phaffii GS115 | 1 |
| Astacus leptodactylus | 1 |
| Aspergillus | 1 |
| Chamaecyparis obtusa | 1 |
| Aspergillus tubingensis | 1 |
| Bacillus halodurans C-125 | 1 |
| Streptomyces avermitilis MA-4680 = NBRC 14893 | 1 |
| Nitratiruptor sp. SB155-2 | 1 |
| Deinococcus radiodurans R1 | 1 |
| Acidothermus cellulolyticus 11B | 1 |
| Ochrobactrum anthropi ATCC 49188 | 1 |
| Agrobacterium radiobacter K84 | 1 |
| Ochrobactrum anthropi GPK 3 | 1 |
| Ochrobactrum sp. G-1 | 1 |
| Rhizobium sp. MTP-10005 | 1 |
| Methanococcoides burtonii | 1 |
| Taraxacum kok-saghyz | 1 |
| Prochlorococcus phage P-SSM4 | 1 |
| Prochlorococcus phage P-SSM2 | 1 |
| Synechococcus sp. WH 8102 | 1 |
| Synechococcus sp. RS9916 | 1 |
| Streptomyces virginiae | 1 |
| Methanothermobacter thermautotrophicus Winter | 1 |
| Synechococcus sp. WH 8020 | 1 |
| Methanocaldococcus fervens | 1 |
| Methanobrevibacter | 1 |
| Dalbergia cochinchinensis | 1 |
| Methanobacterium ivanovii | 1 |
| Dalbergia nigrescens | 1 |
| Paracoccus denitrificans NCIMB 8944 | 1 |
| Propionigenium modestum | 1 |
| Nostoc commune | 1 |
| Methanoplanus limicola | 1 |
| Methanococcales | 1 |
| Aphanizomenon flos-aquae | 1 |
| Geobacillus kaustophilus | 1 |
| Methanothrix soehngenii | 1 |
| Pelosinus fermentans DSM 17108 | 1 |
| Methanolobus tindarius | 1 |
| Methanoculleus marisnigri | 1 |
| Rosa | 1 |
| Spirodela polyrhiza | 1 |
| Toxicodendron vernicifluum | 1 |
| Rosales | 1 |
| Serratia marcescens H30 | 1 |
| Neptuniibacter caesariensis | 1 |
| Psychromonas ingrahamii | 1 |
| Dickeya dadantii | 1 |
| Bacillus subtilis natto | 1 |
| Methanobacterium formicicum | 1 |
| Pseudomonas putida strain PaWl | 1 |
| Brassica nigra | 1 |
| Pseudomonas putida GJ31 | 1 |
| Pseudomonas fluorescens SK1 | 1 |
| Pseudomonas veronii 16-6A | 1 |
| Pseudomonas sp. MG61 | 1 |
| Penicillium palitans | 1 |
| Rhodococcus opacus 1CP | 1 |
| Burkholderia sp. NK8 | 1 |
| Alcaligenes sp. strain L6 | 1 |
| Escherichia coli UTI89 | 1 |
| Streptomyces sp. K30 | 1 |
| Gordonia westfalica | 1 |
| Gordonia polyisoprenivorans | 1 |
| Burkholderia cepacia 2CBS | 1 |
| Haliangium ochraceum | 1 |
| Chondromyces apiculatus | 1 |
| Arthrobacter globiformis KZT1 | 1 |
| Arthrobacter sp. 4-CB1 | 1 |
| Pseudomonas sp. CBS3 | 1 |
| Arthrobacter sp. TM1 | 1 |
| Arthrobacter sp. SU | 1 |
| Pseudomonas sp. Y2 | 1 |
| Pseudoalteromonas sp. CL19 | 1 |
| Pigmentiphaga sp. DL-8 | 1 |
| Rhodopirellula baltica | 1 |
| Pseudoalteromonas sp. LL1 | 1 |
| Pseudoalteromonas sp. AJ5 | 1 |
| Coraliomargarita akajimensis DSM 45221 | 1 |
| Peptoclostridium litorale | 1 |
| Peptoclostridium acidaminophilum | 1 |
| Clostridium aceticum | 1 |
| Bacillus sp. HYS-1 | 1 |
| Alteromonas sp. ATCC 43554 | 1 |
| Ralstonia sp. T6 | 1 |
| Variovorax sp. WDL1 | 1 |
| Variovorax sp. SRS16 | 1 |
| Variovorax sp. PBS-H4 | 1 |
| Kribbella flavida | 1 |
| Zoogloea ramigera | 1 |
| Azotobacter beijerinckii | 1 |
| Paraburkholderia phenoliruptrix | 1 |
| Sphingomonas sp. A1 | 1 |
| Schizosaccharomyces pombe 972h- | 1 |
| Ralstonia pickettii LD1 | 1 |
| Comamonas testosteroni JH5 | 1 |
| Rhodococcus opacus GM-14 | 1 |
| Ruminococcus albus NE1 | 1 |
| Ruminococcus albus 7 = DSM 20455 | 1 |
| Rhodococcus percolatus | 1 |
| Streptomyces rochei | 1 |
| Pseudomonas moorei | 1 |
| Vibrio sp. JT0107 | 1 |
| Pseudomonas putida GPo1 | 1 |
| Nonlabens ulvanivorans | 1 |
| Bacillus sp. GL1 | 1 |
| Pseudomonas cepacia 122 | 1 |
| Pseudomonas sp GU5 | 1 |
| Burkholderia cepacia JS850 | 1 |
| Hydrogenophaga palleronii JS863 | 1 |
| Pseudomonas stutzeri ZWLR2-1 | 1 |
| Burkholderia cepacia R34 | 1 |
| Burkholderia sp. DNT | 1 |
| Rhodopseudomonas palustris TIE-1 | 1 |
| Rhodopseudomonas palustris DSM 123 | 1 |
| Rhodopseudomonas palustris BisB5 | 1 |
| Rhizophoraceae | 1 |
| Rhizophora apiculata | 1 |
| Rhizophora mangle | 1 |
| Dryopteris crassirhizoma | 1 |
| Luffa aegyptiaca | 1 |
| Kalanchoe daigremontiana | 1 |
| Gypsophila vaccaria | 1 |
| Methylomonas sp. 16a | 1 |
| Sophora flavescens | 1 |
| Leishmania braziliensis | 1 |
| Leishmania donovani species complex | 1 |
| Leishmania mexicana species complex | 1 |
| Leishmania tarentolae | 1 |
| Leishmania tropica species complex | 1 |
| Glycyrrhiza uralensis | 1 |
| Shewanella sp. GA-22 | 1 |
| Shewanella pneumatophori | 1 |
| Shewanella hanedai | 1 |
| Schizochytrium sp. ATCC 20888 | 1 |
| Psychromonas ingrahamii 37 | 1 |
| Psychroflexus torquis ATCC 700755 | 1 |
| Photobacterium profundum SS9 | 1 |
| Colwellia psychrerythraea 34H | 1 |
| Botryococcus braunii BOT22 | 1 |
| Methyloceanibacter caenitepidi | 1 |
| Fluviicola taffensis | 1 |
| Cystobacter fuscus | 1 |
| Staphylococcus aureus aureus KCTC 1928 | 1 |
| Shewanella algae | 1 |
| Physaria | 1 |
| Lunaria annua | 1 |
| Hedera helix | 1 |
| Coriandrum sativum | 1 |
| Serratia liquefaciens | 1 |
| Dolichandra unguis-cati | 1 |
| Clostridium tetani | 1 |
| Clostridium malenominatum | 1 |
| Hathewaya limosa | 1 |
| Anaeromusa acidaminophila | 1 |
| Tetrahymena thermophila | 1 |
| Penicillium janthinellum | 1 |
| Thiothrix ramosa | 1 |
| Thioalkalivibrio paradoxus | 1 |
| Lathyrus odoratus | 1 |
| Fagus crenata | 1 |
| Albizia julibrissin | 1 |
| Oleomonas sagaranensis | 1 |
| Citrullus lanatus vulgaris | 1 |
| Acidianus sp. A1-3 | 1 |
| Lathyrus tingitanus | 1 |
| Plesiomonas shigelloides | 1 |
| Thalictrum bulgaricum | 1 |
| Cuphea wrightii | 1 |
| Sulfolobus islandicus | 1 |
| Corydalis cava | 1 |
| Berberis | 1 |
| Thalictrum flavum glaucum | 1 |
| Bacillus cereus ATCC 14579 | 1 |
| Berberis beaniana | 1 |
| Corydalis saxicola | 1 |
| Salmonella enterica O54 | 1 |
| Rhizobium etli | 1 |
| Desulfovibrio fructosivorans | 1 |
| Ancylobacter aquaticus | 1 |
| Hydrogenibacillus schlegelii | 1 |
| Herbaspirillum autotrophicum | 1 |
| Hydrogenophaga flava | 1 |
| Hydrogenophaga palleronii | 1 |
| Hydrogenophilus thermoluteolus | 1 |
| Mycobacterium gordonae | 1 |
| Pseudomonas hydrogenovora | 1 |
| Ancylobacter vacuolatus | 1 |
| Xanthobacter flavus | 1 |
| Starmerella bombicola | 1 |
| Proteus vulgaris OX2 | 1 |
| Proteus penneri 26 | 1 |
| Escherichia coli O98 | 1 |
| Bacteroides fragilis ATCC 23745 | 1 |
| Vibrio cholerae O37 | 1 |
| Pseudonocardia autotrophica | 1 |
| Pseudomonas aeruginosa O4 | 1 |
| Pseudomonas aeruginosa O12 | 1 |
| Pseudomonas aeruginosa O11 | 1 |
| Escherichia coli O26 | 1 |
| Pseudomonas aeruginosa O5 | 1 |
| Escherichia coli O113 | 1 |
| Mycobacterium gastri | 1 |
| Magnaporthe oryzae | 1 |
| Serratia proteamaculans 568 | 1 |
| Mycobacterium tuberculosis complex | 1 |
| Flavobacterium johnsoniae UW101 | 1 |
| Flavobacterium johnsoniae | 1 |
| Caryophyllaceae | 1 |
| Caryophyllales | 1 |
| Caulobacter vibrioides NA1000 | 1 |
| Achromobacter sp. Quastel 52 | 1 |
| Pseudomonas Sp. PB16 | 1 |
| Nitrosospira tenuis | 1 |
| Nitrosospira briensis | 1 |
| Nitrosopumilus maritimus SCM1 | 1 |
| Nitrosomonas eutropha | 1 |
| Nitrosomonas europaea | 1 |
| Nitrosomonas cryotolerans | 1 |
| Nitrosomonas | 1 |
| Pseudomonas putida 1290 | 1 |
| Tanacetum vulgare | 1 |
| Tanacetum balsamita | 1 |
| Mentha x gracilis | 1 |
| Perilla citriodora | 1 |
| Cinnamomum tenuipile | 1 |
| Dietzia sp. CQ4 | 1 |
| Cymbopogon martinii | 1 |
| Cymbopogon flexuosus | 1 |
| Schizonepeta tenuifolia | 1 |
| Carum carvi | 1 |
| Haloarcula japonica | 1 |
| Salvia stenophylla | 1 |
| Sinapis alba | 1 |
| Isatis tinctoria | 1 |
| Crambe hispanica abyssinica | 1 |
| Streptomyces nodosus asukaensis | 1 |
| Streptomyces noursei ATCC 11455 | 1 |
| Camellia taliensis | 1 |
| Xanthomonas campestris pv. campestris | 1 |
| Micromonospora rosaria | 1 |
| Bradyrhizobium sp. SEMIA 6144 | 1 |
| Bradyrhizobium diazoefficiens USDA 110 | 1 |
| Olea europaea | 1 |
| Streptomyces zaomyceticus | 1 |
| Streptomyces narbonensis | 1 |
| Streptomyces flavochromogenes | 1 |
| Streptomyces felleus | 1 |
| Achromobacter superficialis | 1 |
| Treponema vincentii | 1 |
| Treponema phagedenis | 1 |
| Fluoribacter bozemanae | 1 |
| Lemna paucicostata | 1 |
| Pseudomonas aeruginosa TAU-5 | 1 |
| Pseudomonas putida WS | 1 |
| Pseudomonas putida No. 352 | 1 |
| Pseudomonas putida KD6 | 1 |
| Pseudomonas putida C1 | 1 |
| Pseudomonas putida 40 | 1 |
| Alcaligenes sp. CF8 CF8 | 1 |
| Pseudomonas sp. CBB1 | 1 |
| Coffea eugenioides | 1 |
| Coffea liberica | 1 |
| Coffea liberica dewevrei | 1 |
| Coffea abeokutae | 1 |
| Triticum spelta | 1 |
| Ruminococcus gnavus N53 | 1 |
| ruegeria frisia | 1 |
| Desulfobacterium sp. PM4 | 1 |
| Desulfobacterium niacini | 1 |
| Desulfobacterium vacuolatum | 1 |
| Candidatus Pelagibacter ubique HTCC1062 | 1 |
| Ruegeria atlantica | 1 |
| gamma proteobacterium HTCC2207 | 1 |
| Sagittula stellata E-37 | 1 |
| Burkholderia ambifaria AMMD | 1 |
| Halodesulfovibrio aestuarii DSM 10141 | 1 |
| Vertebrata lanosa | 1 |
| Fusarium lateritium | 1 |
| Crypthecodinium cohnii | 1 |
| Neosiphonia paniculata | 1 |
| Ulva curvata | 1 |
| DSMP-degrading bacterium LFR | 1 |
| Sulfitobacter sp. EE-36 | 1 |
| Sulfitobacter sp. NAS-14.1 | 1 |
| Yoonia vestfoldensis SKA53 | 1 |
| Labrenzia aggregata IAM 12614 | 1 |
| Dinoroseobacter shibae DFL 12 = DSM 16493 | 1 |
| Pseudooceanicola batsensis HTCC2597 | 1 |
| Maritimibacter alkaliphilus HTCC2654 | 1 |
| Fulvimarina pelagi HTCC2506 | 1 |
| Rhodobacter sphaeroides ATCC 17029 | 1 |
| Aspergillus sydowii | 1 |
| Ulva intestinalis | 1 |
| Melosira nummuloides | 1 |
| Tetraselmis | 1 |
| Ulva lactuca | 1 |
| Agrobacterium sp. 525a | 1 |
| Wedelia biflora | 1 |
| Escherichia coli K-12 substr. DH10B | 1 |
| Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | 1 |
| Sandaracinus amylolyticus | 1 |
| Methylosarcina lacus | 1 |
| Methylobacter luteus | 1 |
| Eudoraea adriatica | 1 |
| Bacillus halodurans | 1 |
| Xanthobacter agilis | 1 |
| Ochrobactrum anthropi | 1 |
| Lactobacillaceae | 1 |
| Vibrio sp. K-7 | 1 |
| Bacteroides sp. DeMoss 69 | 1 |
| Symbiobacterium thermophilum | 1 |
| Paenibacillus alvei | 1 |
| Fusobacterium varium | 1 |
| Pyrus pyrifolia | 1 |
| Gluconobacter | 1 |
| Escherichia coli O44:K74 | 1 |
| Xanthomonas translucens | 1 |
| Rhodococcus sp. strain SY1 | 1 |
| Pseudomonas putida DS1 | 1 |
| Alcaligenes sp. strain E1 | 1 |
| Acinetobacter sp. strain 20B | 1 |
| Thiobacillus thioparus T5 | 1 |
| Methylophaga thiooxydans | 1 |
| Myxozyma melibiosi | 1 |
| Fusarium phaseoli | 1 |
| Thiocapsa roseopersicina M11 | 1 |
| Providencia stuartii | 1 |
| Trichosanthes kirilowii | 1 |
| Punica granatum | 1 |
| Vernicia fordii | 1 |
| Momordica charantia | 1 |
| Dimorphotheca sinuata | 1 |
| Toxoplasma gondii RH | 1 |
| Toxoplasma gondii ME49 | 1 |
| Toxoplasma gondii | 1 |
| Eimeria tenella | 1 |
| Eimeria | 1 |
| Streptococcus oralis | 1 |
| Bacillus sp. 8 | 1 |
| Pseudomonas sp. P.J. 874 | 1 |
| Clostridioides difficile ATCC 9689 = DSM 1296 | 1 |
| Staphylothermus marinus | 1 |
| Desulfurococcus mucosus | 1 |
| Pseudoalteromonas haloplanktis TAC125 | 1 |
| Citrobacter sp. S-77 | 1 |
| Neonectria obtusispora | 1 |
| Escherichia coli B SPAO | 1 |
| Cryptococcus albidus IFO 0939 | 1 |
| Pseudomonas amygdali pv. sesami | 1 |
| Pseudomonas savastanoi pv. glycinea | 1 |
| Fusarium incarnatum | 1 |
| Lilium longiflorum | 1 |
| Thermoproteus | 1 |
| Thermomicrobium | 1 |
| Thermobaculum | 1 |
| Sphaerobacter | 1 |
| Pyrobaculum | 1 |
| Natronomonas | 1 |
| Natrialba | 1 |
| Ignicoccus | 1 |
| Haloterrigena | 1 |
| Halomicrobium | 1 |
| Haloferax | 1 |
| Haloarcula | 1 |
| Halalkalicoccus | 1 |
| Pseudomonas putida P35X | 1 |
| Sulfolobus solfataricus 98/2 | 1 |
| Chlamydomonas | 1 |
| Prunus mume | 1 |
| Prunus dulcis | 1 |
| Xylella fastidiosa | 1 |
| Tannerella forsythia | 1 |
| Trifolium repens | 1 |
| Francisella tularensis tularensis SCHU S4 | 1 |
| Datura inoxia | 1 |
| Staphylococcus sciuri | 1 |
| Pseudomonas sp. TPU 7192 | 1 |
| Prunus serotina | 1 |
| Lactobacillus paraplantarum | 1 |
| Kluyveromyces lactis | 1 |
| Vicia sativa nigra | 1 |
| Phlebodium aureum | 1 |
| Davallia trichomanoides | 1 |
| Desulfovibrio alaskensis G20 | 1 |
| [Bacillus] caldovelox | 1 |
| Vogesella indigofera | 1 |
| Fusarium Caucasicum | 1 |
| Arthrobacter pascens | 1 |
| Cylindrocarpon didymum | 1 |
| Fusarium anguioides | 1 |
| Arthrobacter sp. KUJ8602 | 1 |
| Leishmania donovani | 1 |
| Streptomyces violaceochromogenes | 1 |
| Jacquinia angustifolia | 1 |
| Plectranthus barbatus | 1 |
| Tissierella creatinophila | 1 |
| Tissierella creatinini | 1 |
| Pseudomonas sp. Ps7 | 1 |
| Arthrobacter sp. TE1826 | 1 |
| Alcaligenes sp. N-42 | 1 |
| Agrobacterium tumefaciens S33 | 1 |
| Shinella sp. HZN7 | 1 |
| Ochrobactrum rhizosphaerae SJY1 | 1 |
| Algoriphagus sp. KK10202C | 1 |
| Pseudomonas sp. HZN6 | 1 |
| Pseudomonas putida S16 | 1 |
| Brevundimonas aurantiaca | 1 |
| Adonis aestivalis | 1 |
| Bacillus pumilus WH4 | 1 |
| Leptothrix discophora strain SS-1 | 1 |
| Pedomicrobium sp. ACM 3067 | 1 |
| Bacillus sp. SG-1 | 1 |
| Bacillus sp. PL-12 | 1 |
| Sphingomonas lacus | 1 |
| Sphingomonas astaxanthinifaciens | 1 |
| Erythrobacter sp. SD-21 | 1 |
| Thiocapsa marina | 1 |
| Marichromatium purpuratum | 1 |
| Candidatus Thiodictyon syntrophicum Cad16 | 1 |
| Streptococcus uberis | 1 |
| Sphingomonas elodea | 1 |
| Sandarakinorhabdus limnophila | 1 |
| Porphyrobacter tepidarius | 1 |
| Erythrobacter longus | 1 |
| Panicum miliaceum | 1 |
| Amaranthus hypochondriacus | 1 |
| Amaranthus hybridus cruentus | 1 |
| Urochloa panicoides | 1 |
| Megathyrsus maximus | 1 |
| Nicotiana plumbaginifolia | 1 |
| Narcissus pseudonarcissus | 1 |
| Carica papaya | 1 |
| Haematococcus lacustris | 1 |
| Agrobacterium aurantiacum | 1 |
| Caulobacter vibrioides | 1 |
| Lilium lancifolium | 1 |
| Aesculus | 1 |
| Botryococcus braunii race L | 1 |
| Streptomyces lasaliensis NRRL3382R | 1 |
| Streptomyces ambofaciens ATCC 23877 | 1 |
| Pseudanabaena limnetica Castaic Lake | 1 |
| Chlorophyta | 1 |
| Microchaete diplosiphon | 1 |
| Leptolyngbya boryana | 1 |
| Pseudomonas putida N-9 | 1 |
| Pseudomonas fluorescens TN5 | 1 |
| Pseudomonas fluorescens ATCC 23728 | 1 |
| Bordetella bronchiseptica RB50 | 1 |
| Bacillus niacini | 1 |
| Eubacterium barkeri | 1 |
| Thalassiosira pseudonana CCMP1335 | 1 |
| Ostreococcus lucimarinus | 1 |
| Cyanidioschyzon merolae strain 10D | 1 |
| Thalassiosira pseudonana | 1 |
| Phytophthora infestans | 1 |
| Aureococcus anophagefferens | 1 |
| Acidiphilium | 1 |
| Thioflavicoccus mobilis | 1 |
| Thiococcus pfennigii | 1 |
| Thioalkalicoccus limnaeus | 1 |
| Halorhodospira abdelmalekii | 1 |
| Chlorobium phaeovibrioides DSM 265 | 1 |
| Alcaligenes sp. strain A175 | 1 |
| Pseudomonas nitroreducens J5-1 | 1 |
| Trifolium incarnatum | 1 |
| Alcaligenes sp. strain OBB65 | 1 |
| Bacillus cereus PF-11 | 1 |
| Stemphylium loti | 1 |
| Microdochium sorghi | 1 |
| Pandoraea pnomenusa | 1 |
| Burkholderia sp. JS150 | 1 |
| Actinoplanes utahensis | 1 |
| Vibrio cholerae 569B | 1 |
| Nepenthes rafflesiana | 1 |
| Nepenthes alata | 1 |
| Rhizobium leguminosarum bv. viciae 3841 | 1 |
| Ipomoea purpurea | 1 |
| Vitis labrusca | 1 |
| Senecio | 1 |
| Freesia hybrid cultivar | 1 |
| Pericallis cruenta | 1 |
| Chrysanthemum x morifolium | 1 |
| Diospyros kaki | 1 |
| Vaccinium myrtillus | 1 |
| Citrus trifoliata | 1 |
| Citrus hanaju | 1 |
| Citrus clementina | 1 |
| Malus sp | 1 |
| Malus pumila | 1 |
| Malus hupehensis | 1 |
| Mentha aquatica citrata | 1 |
| Pimpinella | 1 |
| Actinidia eriantha | 1 |
| Sporosarcina globispora | 1 |
| Brevibacterium | 1 |
| Brevibacillus laterosporus | 1 |
| Bacillus mycoides | 1 |
| Lipomyces starkeyi | 1 |
| Cadra cautella | 1 |
| Spodoptera | 1 |
| Acheta domesticus | 1 |
| Periplaneta fuliginosa | 1 |
| Myzus cerasi | 1 |
| Chrysopa | 1 |
| Oxalobacter formigenes | 1 |
| Novosphingobium aromaticivorans | 1 |
| Cupriavidus oxalaticus | 1 |
| Gelatoporia subvermispora | 1 |
| Escherichia coli J53-1 | 1 |
| Pseudomonas sp. K-62 | 1 |
| Bacillus sp. RC607 | 1 |
| Thermoplasma volcanium | 1 |
| Rickettsia prowazekii Madrid E | 1 |
| Rickettsia prowazekii | 1 |
| Chlamydia trachomatis D/UW-3/CX | 1 |
Chlamydia psittaci |
1 | |
| Ascochyta rabiei | 1 |
| Psilotum nudum | 1 |
| Sterculia foetida | 1 |
| Pseudomonas chloritidismutans | 1 |
| Ideonella dechloratans | 1 |
| Azospira oryzae | 1 |
| Alicycliphilus denitrificans | 1 |
| Candidatus Scalindua wagneri | 1 |
| Candidatus Scalindua brodae | 1 |
| Candidatus Kuenenia stuttgartiensis | 1 |
| Candidatus Jettenia caeni | 1 |
| Candidatus Brocadia anammoxidans | 1 |
| Candidatus Anammoxoglobus | 1 |
| Azospira sp. PCC | 1 |
| Azospira sp. KJ | 1 |
| Dechloromonas sp. PC1 | 1 |
| Dechloromonas sp. MissR | 1 |
| Dechloromonas agitata | 1 |
| Azospirillum sp. TTI | 1 |
| Sulfurospirillum barnesii | 1 |
| Sulfurospirillum arsenophilum | 1 |
| Chrysiogenes arsenatis | 1 |
| [Bacillus] selenitireducens | 1 |
| Anaerobacillus arseniciselenatis | 1 |
| Thermodesulfovibrio yellowstonii | 1 |
| Thermodesulforhabdus norvegica | 1 |
| Desulfovibrio vulgaris Hildenborough | 1 |
| Desulfotomaculum kuznetsovii | 1 |
| Desulfotomaculum geothermicum | 1 |
| Desulfotomaculum australicum | 1 |
| Archaeoglobus profundus | 1 |
| Bacillus azotoformans | 1 |
| Arthrobacter protophormiae RKJ100 | 1 |
| Phormia regina | 1 |
| Helicoverpa armigera | 1 |
| Nocardioides sp. JS1661 | 1 |
| Rhodococcus sp. TMP1 | 1 |
| unidentified bacterium BIS-6 | 1 |
| Pimelobacter sp. R48 | 1 |
| Pseudomonas putida H262 | 1 |
| Thermus caldophilus | 1 |
| Bradyrhizobium sp. JS329 | 1 |
| unidentified bacterium MM-P | 1 |
| unidentified bacterium DG-C1 | 1 |
| Alteromonas macleodii | 1 |
| Rhizobium tropici | 1 |
| Azorhizobium caulinodans | 1 |
| Arthrobacter sp. Q36 | 1 |
| Phycomyces blakesleeanus | 1 |
| Pseudomonas sp. KIE171 | 1 |
| Pseudomonas sp. SG-MS2 | 1 |
| Rhodococcus opacus HL PM-1 | 1 |
| Nocardioides sp. CB 22-2 | 1 |
| Nocardioides simplex FJ2-1A | 1 |
| Pseudomonas putida J | 1 |
| Colchicum autumnale | 1 |
| Comamonas sp. E6 | 1 |
| Anisodus acutangulus | 1 |
| Sphingomonas sp. SS3 | 1 |
| Sphingomonas sp. PH-07 | 1 |
| Erwinia sp | 1 |
| Cupriavidus sp. WS | 1 |
| Salipiger bermudensis HTCC2601 | 1 |
| Erythroxylum coca | 1 |
| Sphingobium japonicum BiD32 | 1 |
| Sphingomonas paucimobilis | 1 |
| Sphingobium sp. SYK-6 | 1 |
| Arthrobacter protophormiae R4 | 1 |
| Tecoma stans | 1 |
| Jasminum grandiflorum | 1 |
| Aplysia californica | 1 |
| Rhodococcus globerulus | 1 |
| Pseudomonas putida KL47 | 1 |
| Comamonas testosteroni 63 | 1 |
| Burkholderia sp. AK-5 | 1 |
| Arthrobacter synephrinum | 1 |
| Pseudomonas putida JD1 | 1 |
| Pseudomonas fluorescens ACB | 1 |
| Polaribacter filamentus | 1 |
| Gemmata sp. Wa1-1 | 1 |
Actinobacteria |
1 | |
| Mycoplasma genitalium | 1 |
| Pseudomonas fluorescens ST | 1 |
| Pseudomonas sp. VLB120 | 1 |
| Corynebacterium sp. strain SY1 | 1 |
| Rhodococcus sp. IGTS8 | 1 |
| Rhodococcus erythropolis XP | 1 |
| Paenibacillus sp. A11-2 | 1 |
| Mycobacterium sp. G3 | 1 |
| Burkholderia mallei | 1 |
| Pseudomonas LD2 | 1 |
| Sphingomonas sp. XLDN2-5 | 1 |
| Sphingomonas sp. CB3 | 1 |
| Pseudomonas rhodesiae | 1 |
| Neptuniibacter sp. CAR-SF | 1 |
| Nicotiana rustica | 1 |
| Pseudomonas putida UCC22 | 1 |
| Delftia tsuruhatensis AD9 | 1 |
| Delftia acidovorans 7N | 1 |
| Frateuria sp. ANA-18 | 1 |
| Delftia sp. AN3 | 1 |
| Acinetobacter sp. YAA | 1 |
| Acinetobacter lwoffii K24 | 1 |
| Pseudomonas sp. AP3 | 1 |
| Rhodococcus sp | 1 |
| Pinus banksiana | 1 |
| Plesiomonas sp. M6 | 1 |
| Pseudomonas sp. ML2 | 1 |
| Pseudomonas putida PL-W | 1 |
| Actinoplanes missouriensis | 1 |
| Azoarcus sp. EB1 | 1 |
| Azoarcus sp. PbN1 | 1 |
| Brevundimonas diminuta | 1 |
| Pseudomonas sp. HH69 | 1 |
| Terrabacter sp. DPO360 | 1 |
| Burkholderia sp. JB1 | 1 |
| Viburnum furcatum | 1 |
| Rhodococcus sp. N-771 | 1 |
| Bacillus sp. OxB-1 | 1 |
| Streptomyces sp. strain V-1 | 1 |
| Pseudomonas fluorescens AN103 | 1 |
| Amycolatopsis sp. HR167 | 1 |
| Amycolatopsis sp. ATCC 39116 | 1 |
| Pseudomonas putida O1 | 1 |
| Roccella tinctoria | 1 |
| Aspergillus itaconicus | 1 |
| Sulfolobus shibatae | 1 |
| Halobacterium sp. JP-6 | 1 |
| Malonomonas rubra | 1 |
| Pseudomonas sp. PG | 1 |
| Pseudomonas sp. ATCC 17483 | 1 |
| pseudomonas putida NP | 1 |
| Pseudomonas putida ATCC 17484 | 1 |
| delta proteobacterium N47 | 1 |
| bacterium enrichment culture clone N47 | 1 |
| Methylomonas methanica | 1 |
| Methylomonas fodinarum | 1 |
| Methylomonas aurantiaca | 1 |
| Methylomicrobium pelagicum | 1 |
| Methylomicrobium album | 1 |
| Methylomicrobium agile | 1 |
| Methylococcus thermophilus | 1 |
| Methylobacter marinus | 1 |
| Methylosphaera | 1 |
| Methylomicrobium japanense | 1 |
| Methylomonas sp. KSPIII | 1 |
| Ammi majus | 1 |
| Pseudomonas sp. strain VM15C | 1 |
| Alcaligenes faecalis KK314 | 1 |
| Sphingopyxis sp. 113P3 | 1 |
| Microbacterium oxydans IH-35A | 1 |
| Acinetobacter sp. SE19 | 1 |
| Brachymonas petroleovorans CHX | 1 |
| Brevibacterium epidermidis | 1 |
| Nocardia globerula | 1 |
| Malus domestica Holsteiner Cox | 1 |
| Malus domestica Golden Delicious | 1 |
| Pseudomonas sp. MA-1 | 1 |
| Ochrobactrum | 1 |
| Neisseria meningitidis serogroup B | 1 |
| Escherichia coli K1 | 1 |
| Legionella pneumophila pneumophila Philadelphia 1 | 1 |
| Escherichia coli O108 | 1 |
| Asterias rubens | 1 |
| Escherichia coli BL21(DE3) | 1 |
| Scheffersomyces stipitis CBS 6054 | 1 |
| Debaryomyces hansenii hansenii CBS767 | 1 |
| Burkholderia cenocepacia | 1 |
| Azotobacter vinelandii NBRC 102612 | 1 |
| Sphingomonas sp. SKA58 | 1 |
| Vibrionaceae | 1 |
| Conium maculatum | 1 |
| Planococcus citreus | 1 |
| Nesterenkonia halobia | 1 |
| Deinococcus radiophilus | 1 |
| Aspergillus alliaceus | 1 |
| Penicillium expansum | 1 |
| Chaetomium globosum | 1 |
| Ephedra gerardiana | 1 |
| Bacillariophyta | 1 |
| Solanum melongena | 1 |
| Solanum aculeatissimum | 1 |
| Planococcus antarcticus | 1 |
| Paenibacillus terrae | 1 |
| Eggerthella lenta | 1 |
| Desulfosporosinus youngiae | 1 |
| Desulfosporosinus acidiphilus | 1 |
| Cryptobacterium sp. CAG:338 | 1 |
| Collinsella tanakaei | 1 |
| Clostridioides difficile CD196 | 1 |
| Clostridioides difficile 630 | 1 |
| Clostridium colicanis | 1 |
| Bacillus nealsonii | 1 |
| Bacillus bataviensis | 1 |
| Nerine bowdenii | 1 |
| Narcissus aff. pseudonarcissus MK-2014 | 1 |
| Galanthus elwesii | 1 |
| Lampranthus sociorum | 1 |
| Synechocystis sp. PCC 6803 substr. Kazusa | 1 |
| Acanthamoeba sp | 1 |
| Cestrum elegans | 1 |
| Pyrococcus furiosus DSM 3638 | 1 |
| Foeniculum vulgare dulce | 1 |
| Aureispira marina | 1 |
| Thermococcus sp. B1001 | 1 |
| Capsicum frutescens | 1 |
| Capsicum | 1 |
| Alangium lamarckii | 1 |
| Carapichea ipecacuanha | 1 |
| Capsicum baccatum | 1 |
| Halorubrum lacusprofundi | 1 |
| Pseudomonas syringae pv. syringae B728a | 1 |
| Pseudomonas taiwanensis | 1 |
| Shewanella putrefaciens 200 | 1 |
| Vibrio anguillarum serovar O2 | 1 |
| Plasmodium falciparum HB3 | 1 |
| Pseudomonas entomophila L48 | 1 |
| Thiomonas delicata | 1 |
| Sulfuriferula plumbiphila | 1 |
| Yersinia kristensenii | 1 |
| Yersinia intermedia | 1 |
| Yersinia frederiksenii | 1 |
| Shigella flexneri | 1 |
| Shigella boydii | 1 |
| Sulfobacillus thermosulfidooxidans | 1 |
| Sulfitobacter pontiacus | 1 |
| Sulfitobacter | 1 |
| Beggiatoa | 1 |
| Staphylococcus pseudintermedius | 1 |
| Staphylococcus aureus aureus NCTC 8325 | 1 |
| Shewanella denitrificans | 1 |
| Methylobacterium nodulans | 1 |
| Cupriavidus metallidurans | 1 |
| Pseudanabaena limnetica | 1 |
| Bordetella parapertussis | 1 |
| Bordetella bronchiseptica | 1 |
| Achromobacter xylosoxidans | 1 |
| Acinetobacter baumannii AYE | 1 |
| Acinetobacter baumannii ACICU | 1 |
| Nitrospira moscoviensis | 1 |
| Nitrospina | 1 |
| Nitrococcus | 1 |
| Nitrobacter winogradskyi | 1 |
| Nitrobacter vulgaris | 1 |
| Nitrobacter hamburgensis | 1 |
| Nitrobacter alkalicus | 1 |
| Nitrobacter | 1 |
| Sulfuricella denitrificans | 1 |
| Ruegeria pomeroyi | 1 |
| Magnetospirillum | 1 |
| Magnetococcus | 1 |
| Chlorobium | 1 |
| Aeromonas salmonicida | 1 |
| Micrococcus percitreus | 1 |
| Bacillus sp. No. 230 | 1 |
| Brachybacterium conglomeratum | 1 |
| Aspergillus quadricinctus | 1 |
| Pseudomonas putida ZWL73 | 1 |
| Streptococcus pneumoniae R6 | 1 |
| Cladosporium cladosporioides | 1 |
| Citrobacter intermedius | 1 |
| Pseudoalteromonas haloplanktis | 1 |
| Acinetobacter haemolyticus | 1 |
| Streptomyces scabiei 87.22 | 1 |
| Septoria lycopersici | 1 |
| Passalora fulva | 1 |
| Fusarium oxysporum sp. lycopersici | 1 |
| Clavibacter michiganensis michiganensis | 1 |
| Alternaria solani | 1 |
| Rhodococcus N-774 | 1 |
| Gram-negative bacterium ASV2 | 1 |
| Vibrio anguillarum serovar O1 | 1 |
| Photobacterium sp. SKA34 | 1 |
| Photobacterium angustum S14 | 1 |
| Phaeobacter inhibens 2.10 | 1 |
| Methylobacterium populi BJ001 | 1 |
| Methylobacterium extorquens PA1 | 1 |
| Methylobacterium extorquens CM4 | 1 |
| Marinobacter hydrocarbonoclasticus | 1 |
| Marinobacter hydrocarbonoclasticus VT8 | 1 |
| Bacillus thuringiensis [] serovar konkukian str. 97-27 | 1 |
| Bacillus clausii KSM-K16 | 1 |
| Bacillus cereus G9241 | 1 |
| Bacillus anthracis Sterne | 1 |
| Variovorax paradoxus B4 | 1 |
| Paracoccus thiophilus | 1 |
| Arthrobacter sp. KI72 | 1 |
| Alicycliphilus sp. BQ1 | 1 |
| Methanoplanus | 1 |
| Pseudomonas putida II-B | 1 |
| Pseudomonas fluorescens I-C | 1 |
| Methanothrix thermoacetophila | 1 |
| Methanothrix | 1 |
| Methanococcoides sp. NaT1 | 1 |
| Vibrio sp. EJY3 | 1 |
| Pseudoalteromonas atlantica T6c | 1 |
| Postechiella marina | 1 |
| Salmonella enterica enterica serovar Paratyphi C | 1 |
| Salmonella enterica enterica serovar Paratyphi B | 1 |
| Salmonella enterica enterica serovar Paratyphi A | 1 |
| Sesamum alatum | 1 |
| Forsythia koreana | 1 |
| Linum | 1 |
| Shewanella amazonensis SB2B | 1 |
| Thuja plicata | 1 |
| Forsythia x intermedia | 1 |
| Pyrococcus sp. ST04 | 1 |
| Caldicellulosiruptor saccharolyticus | 1 |
| Populus tremuloides | 1 |
| Paracoccus laeviglucosivorans | 1 |
| Cassia coluteoides | 1 |
| Mycobacterium sp. DSM 3803 | 1 |
| Herbaspirillum seropedicae | 1 |
| Marichromatium gracile | 1 |
| Coniochaeta ligniaria | 1 |
| Streptomyces sp. KCTC 0041BP | 1 |
| Escherichia coli O7:K1 | 1 |
| Trichosporon moniliiforme WU-0401 | 1 |
| Cutaneotrichosporon moniliiforme | 1 |
Rhodococcus |
1 | |
| Micromonospora | 1 |
| Actinomadura | 1 |
| Nocardiopsis | 1 |
| Pteris vittata | 1 |
| Pseudomonas fluorescens DSM 8341 | 1 |
| Moraxella sp. B | 1 |
| Burkholderia sp. FA1 | 1 |
| Amycolatopsis orientalis | 1 |
| Acidianus infernus | 1 |
| Ammonifex degensii | 1 |
| Desulfomicrobium baculatum | 1 |
| Desulfurobacterium thermolithotrophum | 1 |
| Desulfuromonas acetexigens | 1 |
| Pyrodictium abyssi | 1 |
| Pyrodictium brockii | 1 |
| Sulfurospirillum deleyianum | 1 |
| Stetteria hydrogenophila | 1 |
| Stygiolobus azoricus | 1 |
| Sulfurospirillum arcachonense | 1 |
| Streptomyces mycarofaciens | 1 |
| Escherichia coli O52 | 1 |
| Streptosporangium sibiricum | 1 |
| Actinomadura kijaniata | 1 |
| Xenorhabdus nematophila ATCC 19061 | 1 |
| Photorhabdus luminescens | 1 |
| Shewanella denitrificans OS217 | 1 |
| Lupinus polyphyllus | 1 |
| Janthinobacterium lividum | 1 |
| Duganella sp. B2 | 1 |
| Collimonas sp. CT | 1 |
| Chromobacterium violaceum ATCC 12472 | 1 |
| Streptomyces cattleya | 1 |
| Streptomyces ravidus | 1 |
| Streptomyces aizunenesis NRRL-B-11277 | 1 |
| Paenibacillus sp. JJ-1b | 1 |
| Tanacetum cinerariifolium | 1 |
| Pseudomonas straminea | 1 |
| Paraburkholderia sacchari | 1 |
| Psilocybe cyanescens | 1 |
| Psilocybe cubensis | 1 |
| Bacillus amyloliquefaciens 140N | 1 |
| Paenibacillus polymyxa SC2 | 1 |
| Bacillus atrophaeus 1942 | 1 |
| Bacillus velezensis FZB42 | 1 |
| Pseudomonas fluorescens BL915 | 1 |
| Pseudomonas chlororaphis aureofaciens | 1 |
| Burkholderia cepacia complex | 1 |
| Diutina rugosa | 1 |
| Diutina catenulata | 1 |
| Candida albicans SC5314 | 1 |
| Vitis labrusca x Vitis vinifera | 1 |
| Rubus idaeus strigosus | 1 |
| Mangifera indica | 1 |
| Ananas comosus | 1 |
| Robbsia andropogonis | 1 |
| Aspergillus clavatus NRRL 1980 | 1 |
| Penicillium urticae | 1 |
| Penicillium griseofulvum | 1 |
| Ochromonas danica | 1 |
| Metschnikowia pulcherrima | 1 |
| Actinosynnema mirum DSM 43827 | 1 |
| Pseudonocardia sp. P1 | 1 |
| Renibacterium salmoninarum | 1 |
| Tetragenococcus koreensis | 1 |
| Enterobacter asburiae | 1 |
| Enterobacter hormaechei | 1 |
| Pantoea stewartii | 1 |
| Pseudomonas alcaligenes | 1 |
| Pseudomonas chlororaphis | 1 |
| Pseudomonas clemancea | 1 |
| Pseudomonas collierea | 1 |
| Pseudomonas teessidea | 1 |
| Blighia sapida | 1 |
| Corynebacterium sp. SHS 0007 | 1 |
| Fischerella sp. SAG 46.79 | 1 |
| Fischerella muscicola UTEX 1829 | 1 |
| Actinidia | 1 |
| Ketogulonicigenium vulgare DSM 4025 | 1 |
| Rheum tataricum | 1 |
| Hydrangea macrophylla | 1 |
| Arachis hypogaea | 1 |
| Lamium galeobdolon | 1 |
| Hordeum lechleri | 1 |
| Consolida orientalis | 1 |
| Paul's Scarlet Climber Rose | 1 |
| Pelargonium crispum | 1 |
| Streptomyces achromogenes rubradiris | 1 |
| Streptomyces collinus | 1 |
| Plasmodium vivax | 1 |
| Plasmodium ovale | 1 |
| Plasmodium malariae | 1 |
| Lactobacillus rhamnosus GG | 1 |
| Metazoa | 1 |
| Rhodiola sachalinensis | 1 |
| Rhodiola rosea | 1 |
| endosymbiont of Riftia pachyptila | 1 |
| Sclerotinia sclerotiorum | 1 |
| Fomitopsis palustris | 1 |
| Talaromyces stipitatus | 1 |
| Arthrobacter aurescens TW17 | 1 |
| Streptococcus equinus | 1 |
| Lactobacillus salivarius | 1 |
| Mycobacterium bovis AF2122/97 | 1 |
| Fischerella sp. ATCC 43239 | 1 |
| Streptococcus pneumoniae 23F | 1 |
| Solanum | 1 |
| Enterococcus gallinarum | 1 |
| Enterococcus raffinosus | 1 |
| Populus trichocarpa x Populus deltoides | 1 |
| Pseudomonas putida B2 | 1 |
| Pseudomonas sp. ENV2030 | 1 |
| Pseudomonas putida JS444 | 1 |
| Pseudomonas putida DLL-E4 | 1 |
| Pseudomonas sp. NyZ402 | 1 |
| Moraxella | 1 |
| Desulfuromonas acetoxidans DSM 684 | 1 |
| Rhodococcus opacus SAO101 | 1 |
| Sphingomonas sp. UG30 | 1 |
| Serratia sp. DS001 | 1 |
| Rhodococcus sp. PN1 | 1 |
| Prauserella rugosa | 1 |
| Zygosaccharomyces rouxii | 1 |
| Centaurium erythraea | 1 |
| Methanococcus vannielii | 1 |
| Saccharopolyspora | 1 |
| Oryza | 1 |
| Nicotiana glutinosa | 1 |
| Croton | 1 |
| Croton sublyratus | 1 |
| Lyngbya majuscula | 1 |
| Streptomyces melanosporofaciens | 1 |
| Salvia fruticosa | 1 |
| Salvia rosmarinus | 1 |
| Taxus x media | 1 |
| Taxus canadensis | 1 |
| Taxus brevifolia | 1 |
| Taxus baccata | 1 |
| Staphylococcus aureus aureus N315 | 1 |
| Alternaria brassicicola ATCC 96836 | 1 |
| Trichoderma harzianum | 1 |
| Neurospora crassa 33933 | 1 |
| Neurospora crassa 15069 | 1 |
| Candida maltosa L4 | 1 |
| Slafractonia leguminicola | 1 |
| Anaerovibrio lipolyticus | 1 |
| [Flavobacterium] lutescens | 1 |
| Ruminococcus albus 8 | 1 |
| Bacillus stearothermophilus BR388 | 1 |
| Pseudomonas sp. PL | 1 |
| Mycobacterium avium complex (MAC) | 1 |
| Mirabilis jalapa | 1 |
| Cleretum bellidiforme | 1 |
| Oxybasis rubra | 1 |
| Thermococcus stetteri | 1 |
| Thermococcus celer | 1 |
| Methanothermus fervidus | 1 |
| Thalictrum tuberosum | 1 |
| Coptis japonica dissecta | 1 |
| Xenopus laevis | 1 |
| Anolis carolinensis | 1 |
| Sceloporus jarrovii | 1 |
| Carassius auratus | 1 |
| Pantoea cypripedii | 1 |
| Mycobacterium butyricum | 1 |
| Clostridium perfringens A99 | 1 |
| Thiobacillus thioparus THI 115 | 1 |
| Thiohalophilus thiocyanatoxydans | 1 |
| Acinetobacter junii | 1 |
| Thioalkalivibrio thiocyanodenitrificans | 1 |
| Vernonia galamensis | 1 |
| Crepis palaestina | 1 |
| Euphorbia lagascae | 1 |
| Vaccinia virus | 1 |
| Methanococcus | 1 |
| Synechococcus sp. PCC 7335 | 1 |
| Polaribacter irgensii 23-P | 1 |
| Pyrobaculum arsenaticum | 1 |
| Populus tremula x Populus alba | 1 |
| Lemna minor | 1 |
| Afipia felis 25E1 | 1 |
| Afipia felis 25V | 1 |
| Afipia felis 15B1 | 1 |
| Methylosulfonomonas sp. M2 | 1 |
| Marinosulfonomonas methylotropha | 1 |
| Methylosulfonomonas methylovora | 1 |
| Rhodococcus erythropolis MI2 | 1 |
| Macaca fuscata | 1 |
| Macaca mulatta | 1 |
| Advenella mimigardefordensis DPN7 | 1 |
| Paracoccus pantotrophus NKNCYSA | 1 |
| Hyphomicrobium denitrificans WU-K217 | 1 |
| Escherichia coli O86:B7 | 1 |
| Escherichia coli O86 | 1 |
| Variovorax paradoxus | 1 |
| Escherichia coli O5 | 1 |
| Escherichia coli O104 | 1 |
| a non specified bacterium (Kondo 77) | 1 |
| Klebsiella pneumoniae O3 | 1 |
| Escherichia coli O9a | 1 |
| Ralstonia sp. EDS1 | 1 |
| Pseudomonas deceptionensis | 1 |
| Maricaulis maris MCS10 | 1 |
| Bradyrhizobium diazoefficiens | 1 |
| Corynebacterium sp. B6 | 1 |
| Arthrobacter sp. 9759 | 1 |
| Pseudomonas cruciviae | 1 |
| Bacillus fastidiosus | 1 |
| Pseudomonas putida T | 1 |
| Pseudomonas putida TG2T | 1 |
| Aeromonas jandaei | 1 |
| Vanrija humicola | 1 |
| Pseudomonas sp. NCIMB 10558 | 1 |
| Acidovorax avenae | 1 |
| Klebsiella pneumoniae pneumoniae MGH 78578 | 1 |
| Spartina | 1 |
| Brassica oleracea italica | 1 |
| Prochlorococcus marinus MIT 9211 | 1 |
| Francisella tularensis novicida U112 | 1 |
| Neptunia | 1 |
| Pavlova pinguis | 1 |
| Batis maritima | 1 |
| Endocladia muricata | 1 |
| Rhizobium leguminosarum bv. phaseoli | 1 |
| Phormidium lapideum | 1 |
| Canis lupus familiaris | 1 |
| Pectobacterium atrosepticum SCRI1043 | 1 |
| Heliobacterium modesticaldum Ice1 | 1 |
| Synechococcus nidulans | 1 |
| Chlorogloeopsis fritschii | 1 |
| Alcaligenes viscolactis S-2 | 1 |
| Arthrobacter agilis | 1 |
| Paenarthrobacter aurescens | 1 |
| Pseudarthrobacter oxydans | 1 |
| Arthrobacter ramosus | 1 |
| Cellulosimicrobium cellulans | 1 |
| Cellulomonas fimi | 1 |
| Cellulomonas flavigena | 1 |
| Paenarthrobacter ilicis | 1 |
| Oerskovia turbata | 1 |
| Corynebacterium matruchotii | 1 |
| Corynebacterium ammoniagenes | 1 |
| Corynebacterium stationis | 1 |
| Corynebacterium variabile | 1 |
| Corynebacterium bovis | 1 |
| Corynebacterium callunae | 1 |
| Gordonia amarae | 1 |
| Actinomadura madurae | 1 |
| Actinomadura pelletieri | 1 |
| Saccharopolyspora rectivirgula | 1 |
| Streptomyces spiralis | 1 |
| Promicromonospora citrea | 1 |
| Streptomyces platensis | 1 |
| Streptomyces somaliensis | 1 |
| Rhodobacter capsulatus SB 1003 | 1 |
| Mucor circinelloides | 1 |
| Halomonas sp. HTNK1 | 1 |
| Kluyveromyces marxianus | 1 |
| Chelatococcus asaccharovorans | 1 |
| Corynebacterium nephridii | 1 |
| Actinomyces israelii | 1 |
| Actinomyces viscosus | 1 |
| Pseudomonas sp. B2aba | 1 |
| Halobacterium sp. NCIMB 763 | 1 |
| Ectothiorhodospira haloalkaliphila | 1 |
| Brevibacterium iodinum | 1 |
| Brevibacterium sterolicum | 1 |
| Corynebacterium kutscheri | 1 |
| Corynebacterium pseudotuberculosis | 1 |
| Corynebacterium renale | 1 |
| Corynebacterium ulcerans | 1 |
| Corynebacterium xerosis | 1 |
| Rhodococcus fascians | 1 |
| Rhodococcus corynebacterioides | 1 |
| Nocardia asteroides | 1 |
| Nocardia brasiliensis | 1 |
| Nocardia farcinica | 1 |
| Nocardia transvalensis | 1 |
| Nocardia vaccinii | 1 |
| Rhodococcus rhodnii | 1 |
| Streptomyces gardneri | 1 |
| Pseudomonas fluorescens KU-7 | 1 |
| Syntrophus aciditrophicus | 1 |
| Syntrophus buswellii | 1 |
| Syntrophus gentianae | 1 |
| Actinomycete S4 | 1 |
| Rhodococcus sp. TE1 | 1 |
| Nocardioides sp. C190 | 1 |
| Paenarthrobacter aurescens TC1 | 1 |
| Nocardioides sp. SP12 | 1 |
| Aminobacter ciceronei | 1 |
| Todarodes pacificus | 1 |
| Onchidium | 1 |
| Doryteuthis pealeii | 1 |
| Stigmatella aurantiaca Sg a15 | 1 |
| Rhodococcus erythropolis JCM 6824 | 1 |
| Pseudomonas fluorescens NCIMB 10586 | 1 |
| bacterium | 1 |
| Armillaria mellea | 1 |
| Armillaria gallica | 1 |
| Streptomyces davaonensis | 1 |
| Streptomyces cinnabarinus | 1 |
| Streptomyces lysosuperificus | 1 |
| Streptomyces chartreusis | 1 |
| Nocardia uniformis tsuyamanensis | 1 |
| Actinosynnema mirum | 1 |
| Kitasatospora phosalacinea | 1 |
| Streptomyces echinatus | 1 |
| Streptomyces sp. SNA15896 | 1 |
| Auxenochlorella pyrenoidosa | 1 |
| Streptomyces sp. K01-0509 | 1 |
| Yersinia ruckeri | 1 |
| Photobacterium halotolerans | 1 |
| Streptomyces kanamyceticus | 1 |
| Streptoalloteichus tenebrarius | 1 |
| Sauromatum venosum | 1 |
| Streptomyces morookaense | 1 |
| Streptomyces griseochromogenes | 1 |
| Hydrogenophaga | 1 |
| Herminiimonas arsenicoxydans | 1 |
| arsenite-oxidizing bacterium NT-14 | 1 |
| Bacillus subtilis spizizenii ATCC 6633 | 1 |
| Streptomyces glaucescens | 1 |
| [Candida] vartiovaarae | 1 |
| [Candida] succiphila | 1 |
| [Candida] stellimalicola | 1 |
| [Candida] sonorensis | 1 |
| [Candida] silvicultrix | 1 |
| [Candida] rugopelliculosa | 1 |
| [Candida] quercuum | 1 |
| [Candida] pseudolambica | 1 |
| [Candida] pini | 1 |
| [Candida] ovalis | 1 |
| [Candida] odintsovae | 1 |
| [Candida] norvegica | 1 |
| [Candida] nitratophila | 1 |
| [Candida] nemodendra | 1 |
| [Candida] nanaspora | 1 |
| [Candida] montana | 1 |
| [Candida] methanosorbosa | 1 |
| [Candida] maritima | 1 |
| [Candida] maris | 1 |
| [Candida] inconspicua | 1 |
| [Candida] ethanolica | 1 |
| [Candida] dendrica | 1 |
| [Candida] berthetii | 1 |
| Wickerhamomyces mucosus | 1 |
| Wickerhamomyces anomalus | 1 |
| Starmera caribaea | 1 |
| Starmera amethionina | 1 |
| Saturnispora silvae | 1 |
| Saturnispora diversa | 1 |
| Pichia norvegensis | 1 |
| Phaffomyces opuntiae | 1 |
| Ogataea salicorniae | 1 |
| Ogataea pignaliae | 1 |
| Nakazawaea wickerhamii | 1 |
| Nakazawaea peltata | 1 |
| Kregervanrija fluxuum | 1 |
| Candida sorboxylosa | 1 |
| Candida solani | 1 |
| Candida freyschussii | 1 |
| Candida cariosilignicola | 1 |
| Barnettozyma pratensis | 1 |
| Barnettozyma californica | 1 |
| Ambrosiozyma llanquihuensis | 1 |
| Lygodium circinatum | 1 |
| [Candida] stellata | 1 |
| [Candida] rhagii | 1 |
| [Candida] lactis-condensi | 1 |
| [Candida] gotoi | 1 |
| Wickerhamiella galacta | 1 |
| [Candida] fructus | 1 |
| [Candida] fennica | 1 |
| Nakazawaea populi | 1 |
| Nakazawaea ishiwadae | 1 |
| Nakazawaea holstii | 1 |
| Nakazawaea ernobii | 1 |
| Nakazawaea anatomiae | 1 |
| Kuraishia capsulata | 1 |
| Hyphopichia homilentoma | 1 |
| Hyphopichia burtonii | 1 |
| Clavispora lusitaniae | 1 |
| Citeromyces matritensis | 1 |
| Candida silvanorum | 1 |
| Candida sequanensis | 1 |
| Candida karawaiewii | 1 |
| [Candida] incommunis | 1 |
| Candida entomophila | 1 |
| Paenibacillus polymyxa E681 | 1 |
| chromatium vinosum strain D | 1 |
| Metallosphaera cuprina | 1 |
| Streptomyces rubellomurinus | 1 |
| Azotobacter chroococcum | 1 |
| Acinetobacter lwoffii | 1 |
| [Arthroderma] racemosum | 1 |
| Xanthothecium peruvianum | 1 |
| Uncinocarpus reesii | 1 |
| Trichophyton simii | 1 |
| Trichophyton mentagrophytes | 1 |
| Thermoascus crustaceus | 1 |
| Thermoascus aurantiacus | 1 |
| Thermoascus | 1 |
| Shanorella spirotricha | 1 |
| Sander vitreus | 1 |
| Rattus | 1 |
| Pucciniastrum boehmeriae | 1 |
| Puccinia coronata avenae f. sp. avenae | 1 |
| Pieris rapae | 1 |
| Penicillium malachiteum | 1 |
| Pectinotrichum llanense | 1 |
| Paraphyton cookei | 1 |
| Onygena equina | 1 |
| Onygena corvina | 1 |
| Nannizzia persicolor | 1 |
| Nannizzia nana | 1 |
| Nannizzia incurvata | 1 |
| Nannizzia gypsea | 1 |
| Nannizzia fulva | 1 |
| Microsporum canis | 1 |
| Melampsora epitea | 1 |
| Lophophyton gallinae | 1 |
| Ctenomyces serratus | 1 |
| Cladophora | 1 |
| Ascosphaera proliperda | 1 |
| Ascosphaera major | 1 |
| Ascosphaera atra | 1 |
| Ascosphaera asterophora | 1 |
| Ascosphaera apis | 1 |
| Ascosphaera | 1 |
| Arthrodermataceae | 1 |
| Arthroderma quadrifidum | 1 |
| Arthroderma curreyi | 1 |
| Arthroderma borellii | 1 |
| Arachnotheca glomerata | 1 |
| Arachnomyces minimus | 1 |
| Apinisia graminicola | 1 |
| Streptomyces galilaeus | 1 |
| Streptomyces sp. C5 | 1 |
| Saccharomyces chevalieri | 1 |
| Streptomyces lavendulae lavendulae | 1 |
| Streptomyces garyphalus | 1 |
| Ustilago syntherismae | 1 |
| Ustilago nuda | 1 |
| Ustilago hordei | 1 |
| Tilletia caries | 1 |
| Sphinx ligustri | 1 |
| Rana catesbeiana | 1 |
| Myxotrichum stipitatum | 1 |
| Myxotrichum chartarum | 1 |
| Monascus ruber | 1 |
| Monascus purpureus | 1 |
| Monascus pilosus | 1 |
| Keratinophyton terreum | 1 |
| Keratinophyton saturnoideum | 1 |
| Keratinophyton hispanicum | 1 |
| Gymnoascus demonbreunii | 1 |
| Graphiola phoenicis | 1 |
| Coccinella | 1 |
| Chrysosporium keratinophilum | 1 |
| Aspergillus cejpii | 1 |
| Aphanoascus verrucosus | 1 |
| Amauroascus aureus | 1 |
| Agrius cingulata | 1 |
| Agrobacterium rhizogenes | 1 |
| Micromonospora echinospora | 1 |
| Phaeosphaeria sp. L487 | 1 |
| Streptomyces lividus | 1 |
| Streptomyces ribosidificus | 1 |
| Streptomyces roseogriseus | 1 |
| Streptomyces exfoliatus | 1 |
| Streptomyces arenae | 1 |
| Ensifer adhaerens | 1 |
| Streptomyces luridus | 1 |
| Salmonella enterica enterica serovar Adelaide | 1 |
| Pseudoalteromonas tetraodonis | 1 |
| Providencia alcalifaciens | 1 |
| Escherichia coli O111:NM | 1 |
| Campylobacter fetus | 1 |
| Pseudomonas syringae pv. syringae | 1 |
| Yersinia pseudotuberculosis (type O:2a) | 1 |
| Streptomyces sp. TP-A0274 | 1 |
| Streptomyces longisporoflavus | 1 |
| Streptomyces actuosus | 1 |
| Lentzea albida | 1 |
| Natrialba magadii | 1 |
| Nocardiopsis sp. K-290 | 1 |
| Nonomuraea longicatena | 1 |
| Lechevalieria aerocolonigenes | 1 |
| Citrus junos | 1 |
| Streptomyces hygroscopicus ATCC 21705 | 1 |
| Streptomyces viridochromogenes DSM 40736 | 1 |
| Streptomyces viridochromogenes | 1 |
| Bacillus brevis Nagano | 1 |
| Aneurinibacillus migulanus | 1 |
| Aneurinibacillus thermoaerophilus | 1 |
| Streptomyces galbus | 1 |
| Streptomyces ornatus | 1 |
| Kitasatospora griseola MF730-N6 MF730-N6 | 1 |
| Campylobacter jejuni jejuni 81-176 | 1 |
| Streptomyces alboniger | 1 |
| Wachendorfia thyrsiflora | 1 |
| Anigozanthos preissii | 1 |
| Streptomyces albidoflavus | 1 |
| Streptomyces hygroscopicus 10-22 | 1 |
| Streptomyces hygroscopicus limoneus | 1 |
| Streptomyces hygroscopicus jinggangensis 5008 | 1 |
| Streptomyces hygroscopicus jinggangensis | 1 |
| Quercus rubra | 1 |
| Pseudomonas fluorescens 2-79 | 1 |
| Streptomyces wedmorensis | 1 |
| Photorhabdus laumondii laumondii TTO1 | 1 |
| Salinispora tropica | 1 |
| Eubacterium oxidoreducens G41 | 1 |
| Pseudomonas putida PDC | 1 |
| Aloe ferox | 1 |
| Streptomyces peucetius caesius ATCC 27952 | 1 |
| Proteiniphilum acetatigenes | 1 |
| Prevotella paludivivens | 1 |
| Paraprevotella xylaniphila | 1 |
| Paraprevotella clara | 1 |
| Parabacteroides sp. CAG:409 | 1 |
| Parabacteroides goldsteinii | 1 |
Bacteroides |
1 | |
| Ribes nigrum | 1 |
| Oenothera biennis | 1 |
| Borago officinalis | 1 |
| Plumbago indica | 1 |
| Plumbago europaea | 1 |
| Amylomyces rouxii | 1 |
| Trichoderma reesei QM9414 | 1 |
| Thermoanaerobacterium saccharolyticum | 1 |
| Thioalkalivibrio thiocyanoxidans | 1 |
| Robinia pseudoacacia | 1 |
| Carboxydothermus hydrogenoformans | 1 |
| Syntrophomonas wolfei | 1 |
| Dorea longicatena | 1 |
| Anaerotruncus colihominis | 1 |
| Tetradesmus obliquus | 1 |
| Silene latifolia alba | 1 |
| Thermococcus onnurineus NA1 | 1 |
| Thermococcus gammatolerans | 1 |
| Scutellaria viscidula | 1 |
| Streptomyces odorifer | 1 |
| Streptomyces mediolani | 1 |
| Streptomyces lividans | 1 |
| Penicillium olsonii | 1 |
| Aspergillus flavus NRRL3357 | 1 |
| Lysobacter dokdonensis | 1 |
| Kocuria rhizophila | 1 |
| Arenimonas malthae | 1 |
| Lactococcus garvieae 20-92 | 1 |
| Asaccharobacter celatus AHU1763 | 1 |
| Slackia sp. NATTS | 1 |
| Slackia isoflavoniconvertens | 1 |
| human intestinal bacterium SNU-Julong732 | 1 |
| Adlercreutzia equolifaciens | 1 |
| Jeotgalicoccus sp. ATCC 8456 | 1 |
| Cinchona pubescens | 1 |
| Cinchona pitayensis | 1 |
| Cinchona officinalis | 1 |
| Cinchona mutisii | 1 |
| Cinchona macrocalyx | 1 |
| Cinchona calisaya | 1 |
| Cinchona | 1 |
| Vicia faba Chukyo | 1 |
| Mycobacterium sp. ELW1 | 1 |
| Mycolicibacterium rhodesiae JS60 | 1 |
| Rhodococcus sp. AD45 | 1 |
| Euonymus alatus | 1 |
| Mycobacterium vaccae JOB5 | 1 |
| Mycobacterium austroafricanum IFP 2015 | 1 |
| Mycobacterium austroafricanum IFP 2012 | 1 |
| Hydrogenophaga flava ENV735 | 1 |
| Methylibium petroleiphilum PM1 | 1 |
| Aquincola tertiaricarbonis | 1 |
| Dimorphandra mollis | 1 |
| Prevotella denticola | 1 |
| Prevotella dentalis | 1 |
| Bacteroides salanitronis | 1 |
| Bacteroides helcogenes | 1 |
| Alistipes finegoldii | 1 |
| Tagetes patula | 1 |
| Tagetes erecta | 1 |
| Rudbeckia hirta | 1 |
| Pelobacter venetianus | 1 |
| Pelobacter carbinolicus DSM 2380 | 1 |
| Clostridium magnum | 1 |
| Flaveria chlorifolia | 1 |
| Pseudomonas putida KT2442 | 1 |
| Achromobacter | 1 |
| Cephalocereus senilis | 1 |
| Staphylococcus aureus aureus | 1 |
| Vaccinium vitis-idaea | 1 |
| Salvia hispanica | 1 |
| Portulaca oleracea | 1 |
| Hippophae rhamnoides | 1 |
| Thermosipho melanesiensis | 1 |
| Thermoanaerobacter pseudethanolicus | 1 |
| Natranaerobius thermophilus | 1 |
| Fervidobacterium nodosum | 1 |
| Alkaliphilus oremlandii | 1 |
| Alkaliphilus metalliredigens | 1 |
| Thraustochytrium sp. ATCC21685 | 1 |
| Pavlova lutheri | 1 |
| Marchantia polymorpha | 1 |
| Botryococcus braunii BOT88-2 | 1 |
| Moritella marina ATCC 15381 | 1 |
| Cyanobium gracile PCC 6307 | 1 |
| Helicobacter pylori SS1 | 1 |
| Penicilliopsis zonata | 1 |
| Aspergillus carneus | 1 |
| Streptococcus ratti | 1 |
| Spiroplasma citri | 1 |
| Mycoplasma hominis | 1 |
| Lactobacillus hilgardii | 1 |
| Aphanocapsa | 1 |
| Peganum harmala | 1 |
| Lactuca sativa | 1 |
| Helianthus annuus | 1 |
| Barnadesia spinosa | 1 |
| Epichloe hybrida | 1 |
| Claviceps fusiformis | 1 |
| Balansia obtecta | 1 |
| Chromatium | 1 |
| Methanobrevibacter ruminantium | 1 |
| Paenibacillus popilliae | 1 |
| Leptospira biflexa serovar Patoc | 1 |
| Geobacter sulfurreducens | 1 |
| Schizophyllum commune | 1 |
| Pleurotus ostreatus | 1 |
| Pichia fermentans | 1 |
| Lentinus sajor-caju | 1 |
| Grifola frondosa | 1 |
| Agaricus bisporus | 1 |
| Escherichia coli Crookes | 1 |
| Plesiomonas sp. Yoshida 95 | 1 |
| Scytonema sp | 1 |
| Kocuria varians | 1 |
| Asanoa ferruginea | 1 |
| Setaria italica | 1 |
| Anabaena sp. 90 | 1 |
| [Brevibacterium] flavum | 1 |
| Leptospira meyeri | 1 |
| Pantoea stewartii stewartii | 1 |
| Betula | 1 |
| Betula pubescens | 1 |
| Piper nigrum | 1 |
| Arthrobacter | 1 |
| Lawsonia inermis | 1 |
| Erysiphaceae | 1 |
| Tapinella panuoides | 1 |
| Suillus grevillei | 1 |
| Pyrobaculum neutrophilum V24Sta | 1 |
| [Butyribacterium] methylotrophicum | 1 |
| Syntrophococcus sucromutans | 1 |
| Sporomusa termitida | 1 |
| Sporomusa malonica | 1 |
| Moorella thermoautotrophica | 1 |
| Acetitomaculum ruminis | 1 |
| Arabidopsis thaliana Ws | 1 |
| Setophoma sacchari | 1 |
| Roseiflexus sp. RS-1 | 1 |
| Roseiflexus castenholzii | 1 |
| Chloroflexus aggregans | 1 |
| Gordonia sp. TY-5 | 1 |
| Mycobacterium sp. Py1 | 1 |
| Mycobacterium goodii strain 12523 | 1 |
| Laminaria digitata | 1 |
| Fucus gardneri | 1 |
| Nitrosopumilus maritimus | 1 |
| Gluconobacter oxydans UV10 | 1 |
| Gluconobacter oxydans IFO 3255 | 1 |
| Ketogulonicigenium vulgare | 1 |
| Chondrus crispus | 1 |
| Oligotropha carboxidovorans | 1 |
| Hydrogenophaga pseudoflava | 1 |
| Moraxella sp | 1 |
| Clostridium aminobutyricum | 1 |
| Candida methylica | 1 |
| Xanthomonas oryzae pv. oryzae | 1 |
| Phleum pratense | 1 |
| Geobacillus thermodenitrificans NG80-2 | 1 |
| Sphingobacterium mizutaii | 1 |
| Desulfosarcina cetonica | 1 |
| Desulfococcus biacutus | 1 |
| Escherichia coli K4 | 1 |
| Enterobacter cloacae | 1 |
| Geotrichum sp. M128 | 1 |
| Aspergillus fischeri NRRL 181 | 1 |
| Pseudomonas sp. MS | 1 |
| Chrysosporium lucknowense | 1 |
| Pseudomonas savastanoi | 1 |
| Vibrio sp. XY-214 | 1 |
| Vibrio sp. AX-4 | 1 |
| Alcaligenes sp. XY-234 | 1 |
| Picea glauca | 1 |
| Brevibacterium sp. DPO 1361 | 1 |
| Agrobacterium | 1 |
| Ajuga reptans | 1 |
| Taphrina wiesneri | 1 |
| Taphrina pruni | 1 |
| Taphrina deformans | 1 |
| uncultured bacterium HF130_AEPn_1 | 1 |
| Pseudomonas sp. 7B | 1 |
| Cucurbita pepo medullosa | 1 |
| Euglena | 1 |
| Pseudomonas fluorescens 23F | 1 |
| Streptococcus agalactiae NEM316 | 1 |
| Clostridium ventriculi | 1 |
| Acetobacter | 1 |
| Streptococcus | 1 |
| Candida cloacae | 1 |
| Telluria mixta | 1 |
| Methylovorus sp. MP688 | 1 |
| Paraburkholderia phymatum | 1 |
| Camellia sinensis sinensis | 1 |
| Vibrio fluvialis JS17 | 1 |
| Butyrivibrio fibrisolvens | 1 |
| Suberites domuncula | 1 |
| Scapharca broughtonii | 1 |
| Pecten maximus | 1 |
| Pecten jacobaeus | 1 |
| Patiria pectinifera | 1 |
| Meretrix lusoria | 1 |
| Marphysa sanguinea | 1 |
| Littorina littorea | 1 |
| Haliotis tuberculata lamellosa | 1 |
| Halichondria japonica | 1 |
| Cellana grata | 1 |
| Busycotypus canaliculatus | 1 |
| Arabella iricolor | 1 |
| Dicranum scoparium | 1 |
| Ceratodon purpureus | 1 |
| Crepis alpina | 1 |
| Cantharellus formosus | 1 |
| Pseudomonas sp. YL | 1 |
| Solanum habrochaites 2861 | 1 |
| Solanum habrochaites 2098 | 1 |
| Solanum habrochaites 1777 | 1 |
| Solanum habrochaites 1731 | 1 |
| Clostridium bifermentans DPH-1 | 1 |
| Sulfurospirillum multivorans | 1 |
| Desulfitobacterium hafniense Y51 | 1 |
| Desulfitobacterium chlororespirans | 1 |
| Dehalococcoides mccartyi VS | 1 |
| Dehalobacter restrictus | 1 |
| Sphingobium japonicum | 1 |
| Acholeplasma laidlawii | 1 |
| Weissella paramesenteroides | 1 |
| Weissella confusa | 1 |
| Leuconostoc mesenteroides dextranicum | 1 |
| Lactobacillus sanfranciscensis | 1 |
| Propionibacterium cyclohexanicum | 1 |
| Pectinatus frisingensis | 1 |
| Organism | Number of pathways |
| a non specified bacterium (Kondo 77) | 1 |
| Abies grandis | 12 |
| Acanthamoeba sp | 1 |
| Acer pseudoplatanus | 2 |
| Acetitomaculum ruminis | 1 |
| Acetivibrio cellulolyticus | 2 |
| Acetoanaerobium sticklandii | 4 |
| Acetobacter | 1 |
| Acetobacter aceti | 4 |
| Acetobacter pasteurianus | 2 |
| Acetobacterium carbinolicum | 2 |
| Acetobacterium woodii | 3 |
| Acetohalobium arabaticum DSM 5501 | 1 |
| Acheta domesticus | 1 |
| Acholeplasma laidlawii | 1 |
| Achromobacter | 1 |
| Achromobacter denitrificans | 2 |
| Achromobacter ruhlandii | 2 |
| Achromobacter sp. Quastel 52 | 1 |
| Achromobacter superficialis | 1 |
| Achromobacter xylosoxidans | 1 |
| Achromobacter xylosoxidans NCIMB 10751 | 3 |
| Acidaminococcus fermentans | 1 |
| Acidianus | 1 |
| Acidianus ambivalens | 6 |
| Acidianus brierleyi | 1 |
| Acidianus infernus | 1 |
| Acidianus sp. A1-3 | 1 |
| Acidianus tengchongensis | 1 |
| Acidiphilium | 1 |
| Acidiphilium acidophilum | 5 |
| Acidipropionibacterium acidipropionici | 3 |
| Acidithiobacillus ferrooxidans | 13 |
| Acidithiobacillus thiooxidans | 6 |
| Acidothermus cellulolyticus 11B | 1 |
| Acidovorax avenae | 1 |
| Acidovorax citrulli | 3 |
| Acidovorax facilis | 2 |
| Acidovorax sp. JS42 | 2 |
| Acinetobacter | 2 |
| Acinetobacter baumannii | 2 |
| Acinetobacter baumannii ACICU | 1 |
| Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | 1 |
| Acinetobacter baumannii AYE | 1 |
| Acinetobacter calcoaceticus | 9 |
| Acinetobacter calcoaceticus anitratus | 2 |
| Acinetobacter haemolyticus | 1 |
| Acinetobacter junii | 1 |
| Acinetobacter lwoffii | 1 |
| Acinetobacter lwoffii K24 | 1 |
| Acinetobacter sp. ADP1 | 8 |
| Acinetobacter sp. NCIMB9871 | 2 |
| Acinetobacter sp. SE19 | 1 |
| Acinetobacter sp. strain 20B | 1 |
| Acinetobacter sp. YAA | 1 |
| Acremonium chrysogenum | 3 |
| Actinidia | 1 |
| Actinidia chinensis | 3 |
| Actinidia deliciosa | 3 |
| Actinidia eriantha | 1 |
| Actinoalloteichus cyanogriseus | 3 |
Actinobacteria |
1 | |
| Actinomadura | 1 |
| Actinomadura kijaniata | 1 |
| Actinomadura madurae | 1 |
| Actinomadura pelletieri | 1 |
| Actinomyces bovis | 2 |
| Actinomyces israelii | 1 |
| Actinomyces viscosus | 1 |
| Actinomycete S4 | 1 |
| Actinoplanes missouriensis | 1 |
| Actinoplanes utahensis | 1 |
| Actinopolyspora halophila | 2 |
| Actinosynnema mirum | 1 |
| Actinosynnema mirum DSM 43827 | 1 |
| Adiantum capillus-veneris | 2 |
| Adlercreutzia equolifaciens | 1 |
| Adonis aestivalis | 1 |
| Adonis aestivalis palaestina | 2 |
| Advenella mimigardefordensis | 2 |
| Advenella mimigardefordensis DPN7 | 1 |
| Aedes aegypti | 3 |
| Aequorea aequorea | 1 |
| Aequorea victoria | 1 |
| Aerococcus viridans | 3 |
| Aeromonas caviae | 6 |
| Aeromonas hydrophila | 8 |
| Aeromonas jandaei | 1 |
| Aeromonas salmonicida | 1 |
| Aeropyrum pernix | 5 |
| Aesculus | 1 |
| Afipia felis 15B1 | 1 |
| Afipia felis 25E1 | 1 |
| Afipia felis 25V | 1 |
| Agapanthus africanus | 4 |
| Agaricus bisporus | 1 |
| Aggregatibacter actinomycetemcomitans | 3 |
| Agrius cingulata | 1 |
| Agrobacterium | 1 |
| Agrobacterium aurantiacum | 1 |
| Agrobacterium fabrum C58 | 10 |
| Agrobacterium radiobacter K84 | 1 |
| Agrobacterium radiobacter S2 | 1 |
| Agrobacterium rhizogenes | 1 |
| Agrobacterium sp. 525a | 1 |
| Agrobacterium sp. DSM 8888 | 2 |
| Agrobacterium tumefaciens | 25 |
| Agrobacterium tumefaciens S33 | 1 |
| Agromyces mediolanus | 4 |
| Ajuga reptans | 1 |
| Alangium lamarckii | 1 |
| Albizia julibrissin | 1 |
| Alcaligenes faecalis | 6 |
| Alcaligenes faecalis KK314 | 1 |
| Alcaligenes faecalis M3A | 2 |
| Alcaligenes sp. CF8 CF8 | 1 |
| Alcaligenes sp. N-42 | 1 |
| Alcaligenes sp. O-1 | 4 |
| Alcaligenes sp. strain A175 | 1 |
| Alcaligenes sp. strain E1 | 1 |
| Alcaligenes sp. strain L6 | 1 |
| Alcaligenes sp. strain OBB65 | 1 |
| Alcaligenes sp. XY-234 | 1 |
| Alcaligenes viscolactis S-2 | 1 |
| Alexandrium tamarense | 1 |
| Algoriphagus sp. KK10202C | 1 |
| Alicycliphilus denitrificans | 1 |
| Alicycliphilus sp. BQ1 | 1 |
| Aliivibrio fischeri | 4 |
| Aliivibrio salmonicida LFI1238 | 2 |
| Alistipes finegoldii | 1 |
| Alkaliphilus metalliredigens | 1 |
| Alkaliphilus oremlandii | 1 |
| Allium aflatunense | 2 |
| Allium altaicum | 2 |
| Allium altyncolicum | 2 |
| Allium ampeloprasum | 3 |
| Allium ascalonicum | 2 |
| Allium cepa | 9 |
| Allium cepa aggregatum | 1 |
| Allium chinense | 2 |
| Allium fistulosum | 1 |
| Allium nutans | 1 |
| Allium ochotense | 2 |
| Allium sativum | 3 |
| Allium schoenoprasum | 1 |
| Allium siculum | 1 |
| Allium tuberosum | 1 |
| Allium ursinum | 1 |
| Allium victorialis | 2 |
| Allochromatium vinosum | 15 |
| Aloe arborescens | 4 |
| Aloe ferox | 1 |
| Alternaria brassicicola ATCC 96836 | 1 |
| Alternaria solani | 1 |
| Alteromonas macleodii | 1 |
| Alteromonas sp. ATCC 43554 | 1 |
| Amanita muscaria | 5 |
| Amaranthus hybridus cruentus | 1 |
| Amaranthus hypochondriacus | 1 |
| Amauroascus aureus | 1 |
| Ambrosiozyma llanquihuensis | 1 |
| Aminobacter aminovorans | 4 |
| Aminobacter ciceronei | 1 |
| Ammi majus | 1 |
| Ammonifex degensii | 1 |
| Amorpha fruticosa | 2 |
| Amycolatopsis lactamdurans | 3 |
| Amycolatopsis mediterranei | 4 |
| Amycolatopsis methanolica | 2 |
| Amycolatopsis orientalis | 1 |
| Amycolatopsis sp. ATCC 39116 | 1 |
| Amycolatopsis sp. HR167 | 1 |
| Amylomyces rouxii | 1 |
| Anabaena sp. 90 | 1 |
| Anaerobacillus arseniciselenatis | 1 |
| Anaeromusa acidaminophila | 1 |
| Anaerotignum propionicum | 4 |
| Anaerotruncus colihominis | 1 |
| Anaerovibrio lipolyticus | 1 |
| Ananas comosus | 1 |
| Anchusa officinalis | 2 |
| Ancylobacter aquaticus | 1 |
| Ancylobacter vacuolatus | 1 |
| Anemone leveillei | 2 |
| Aneurinibacillus migulanus | 1 |
| Aneurinibacillus thermoaerophilus | 1 |
| Aneurinibacillus thermoaerophilus L420-91 | 2 |
| Anigozanthos preissii | 1 |
| Anisodus acutangulus | 1 |
| Annwoodia aquaesulis | 2 |
| Anolis carolinensis | 1 |
| Anthracobia melaloma | 1 |
| Anthriscus sylvestris | 2 |
| Antirrhinum majus | 2 |
| Apantesis nevadensis geneura | 1 |
| Aphanizomenon flos-aquae | 1 |
| Aphanoascus verrucosus | 1 |
| Aphanocapsa | 1 |
| Aphanothece halophytica | 3 |
| Aphelandra squarrosa | 2 |
| Apinisia graminicola | 1 |
| Apis mellifera | 3 |
| Apium graveolens | 2 |
| Aplysia californica | 1 |
| Aquatica lateralis | 1 |
| Aquifex aeolicus | 10 |
| Aquifex aeolicus VF5 | 2 |
| Aquifex pyrophilus | 2 |
| Aquilaria crassna | 1 |
| Aquilegia vulgaris | 1 |
| Aquincola tertiaricarbonis | 1 |
| Arabella iricolor | 1 |
| Arabidopsis | 2 |
| Arabidopsis lyrata | 2 |
| Arabidopsis thaliana | 14 |
| Arabidopsis thaliana col | 344 |
| Arabidopsis thaliana Cvi | 3 |
| Arabidopsis thaliana ler | 4 |
| Arabidopsis thaliana Ws | 1 |
| Arachis hypogaea | 1 |
| Arachnomyces minimus | 1 |
| Arachnotheca glomerata | 1 |
| Archaea | 2 |
| Archaeoglobus fulgidus | 12 |
| Archaeoglobus fulgidus 7324 | 2 |
| Archaeoglobus profundus | 1 |
| Arctia caja | 1 |
| Arenicola marina | 2 |
| Arenimonas malthae | 1 |
| Argemone mexicana | 2 |
| Armillaria gallica | 1 |
| Armillaria mellea | 1 |
| Aromatoleum aromaticum EbN1 | 3 |
| arsenite-oxidizing bacterium NT-14 | 1 |
| Artemisia annua | 7 |
| Arthrobacter | 1 |
| Arthrobacter agilis | 1 |
| Arthrobacter aurescens TW17 | 1 |
| Arthrobacter citreus | 3 |
| Arthrobacter crystallopoietes | 3 |
| Arthrobacter globiformis | 8 |
| Arthrobacter globiformis KZT1 | 1 |
| Arthrobacter methylotrophus | 2 |
| Arthrobacter pascens | 1 |
| Arthrobacter protophormiae R4 | 1 |
| Arthrobacter protophormiae RKJ100 | 1 |
| Arthrobacter ramosus | 1 |
| Arthrobacter sp | 4 |
| Arthrobacter sp. 4-CB1 | 1 |
| Arthrobacter sp. 9759 | 1 |
| Arthrobacter sp. KI72 | 1 |
| Arthrobacter sp. KUJ8602 | 1 |
| Arthrobacter sp. Q36 | 1 |
| Arthrobacter sp. SU | 1 |
| Arthrobacter sp. TE1826 | 1 |
| Arthrobacter sp. TM1 | 1 |
| Arthrobacter sp. TMP-1 | 1 |
| Arthrobacter synephrinum | 1 |
| Arthroderma borellii | 1 |
| Arthroderma curreyi | 1 |
| Arthroderma quadrifidum | 1 |
| Arthrodermataceae | 1 |
| Arthrospira platensis | 4 |
| Asaccharobacter celatus AHU1763 | 1 |
| Asanoa ferruginea | 1 |
| Ascaris lumbricoides | 3 |
| Ascaris suum | 3 |
| Asclepias syriaca | 2 |
| Ascochyta rabiei | 1 |
| Ascosphaera | 1 |
| Ascosphaera apis | 1 |
| Ascosphaera asterophora | 1 |
| Ascosphaera atra | 1 |
| Ascosphaera major | 1 |
| Ascosphaera proliperda | 1 |
| Asparagus officinalis | 2 |
| Aspergillus | 1 |
| Aspergillus aculeatus | 3 |
| Aspergillus alliaceus | 1 |
| Aspergillus awamori | 2 |
| Aspergillus carneus | 1 |
| Aspergillus cejpii | 1 |
| Aspergillus clavatus | 1 |
| Aspergillus clavatus NRRL 1980 | 1 |
| Aspergillus fischeri | 3 |
| Aspergillus fischeri NRRL 181 | 1 |
| Aspergillus flavus | 8 |
| Aspergillus flavus NRRL3357 | 1 |
| Aspergillus fumigatus | 10 |
| Aspergillus itaconicus | 1 |
| Aspergillus japonicus | 2 |
| Aspergillus nidulans | 16 |
| Aspergillus niger | 19 |
| Aspergillus niger ATCC 1015 | 2 |
| Aspergillus oryzae | 6 |
| Aspergillus parasiticus | 5 |
| Aspergillus quadricinctus | 1 |
| Aspergillus rugulosus | 3 |
| Aspergillus sp. MF297-2 | 2 |
| Aspergillus stellatus | 2 |
| Aspergillus sydowii | 1 |
| Aspergillus terreus | 5 |
| Aspergillus terricola | 2 |
| Aspergillus tubingensis | 1 |
| Aspergillus versicolor | 3 |
| Astacus leptodactylus | 1 |
| Asterias rubens | 1 |
| Astragalus | 2 |
| Astragalus bisulcatus | 2 |
| Astragalus mongholicus | 2 |
| Atractylodes lancea | 1 |
| Atropa belladonna | 4 |
| Aurantimonas manganoxydans SI85-9A1 | 2 |
| Aureispira marina | 1 |
| Aureobasidium pullulans | 2 |
| Aureococcus anophagefferens | 1 |
| Auxenochlorella pyrenoidosa | 1 |
| Avena sativa | 7 |
| Avena strigosa | 7 |
| Aves | 3 |
| Azoarcus evansii | 5 |
| Azoarcus sp. EB1 | 1 |
| Azoarcus sp. PbN1 | 1 |
| Azoarcus sp. T | 2 |
| Azorhizobium caulinodans | 1 |
| Azospira oryzae | 1 |
| Azospira sp. KJ | 1 |
| Azospira sp. PCC | 1 |
| Azospirillum brasilense | 8 |
| Azospirillum lipoferum | 2 |
| Azospirillum sp. TTI | 1 |
| Azotobacter beijerinckii | 1 |
| Azotobacter chroococcum | 1 |
| Azotobacter vinelandii | 15 |
| Azotobacter vinelandii NBRC 102612 | 1 |
| Bacillariophyta | 1 |
| Bacillus alcalophilus | 2 |
| Bacillus amyloliquefaciens | 2 |
| Bacillus amyloliquefaciens 140N | 1 |
| Bacillus anthracis | 6 |
| Bacillus anthracis Sterne | 1 |
| Bacillus atrophaeus 1942 | 1 |
| Bacillus azotoformans | 1 |
| Bacillus badius | 2 |
| Bacillus bataviensis | 1 |
| Bacillus brevis Nagano | 1 |
| Bacillus cereus | 10 |
| Bacillus cereus ATCC 14579 | 1 |
| Bacillus cereus G9241 | 1 |
| Bacillus cereus PF-11 | 1 |
| Bacillus circulans | 6 |
| Bacillus clausii KSM-K16 | 1 |
| Bacillus coagulans | 2 |
| Bacillus fastidiosus | 1 |
| Bacillus firmus | 2 |
| Bacillus halodurans | 1 |
| Bacillus halodurans C-125 | 1 |
| Bacillus halotolerans | 2 |
| Bacillus lentus | 2 |
| Bacillus licheniformis | 6 |
| Bacillus megaterium | 11 |
| Bacillus methanolicus | 3 |
| Bacillus mycoides | 1 |
| Bacillus nealsonii | 1 |
| Bacillus niacini | 1 |
| Bacillus psychrosaccharolyticus | 2 |
| Bacillus pumilus | 4 |
| Bacillus pumilus WH4 | 1 |
| Bacillus racemilacticus | 2 |
| Bacillus sp. 8 | 1 |
| Bacillus sp. GL1 | 1 |
| Bacillus sp. HYS-1 | 1 |
| Bacillus sp. No. 230 | 1 |
| Bacillus sp. OxB-1 | 1 |
| Bacillus sp. PL-12 | 1 |
| Bacillus sp. RC607 | 1 |
| Bacillus sp. SG-1 | 1 |
| Bacillus stearothermophilus BR388 | 1 |
| Bacillus subtilis | 64 |
| Bacillus subtilis natto | 1 |
| Bacillus subtilis spizizenii ATCC 6633 | 1 |
| Bacillus subtilis spizizenii W23 | 2 |
| Bacillus subtilis subtilis 168 | 43 |
| Bacillus thuringiensis | 4 |
| Bacillus thuringiensis [] serovar konkukian str. 97-27 | 1 |
| Bacillus velezensis FZB42 | 1 |
| bacterium | 1 |
| bacterium enrichment culture clone N47 | 1 |
Bacteroides |
1 | |
| Bacteroides eggerthii | 4 |
| Bacteroides fragilis | 9 |
| Bacteroides fragilis ATCC 23745 | 1 |
| Bacteroides fragilis NCTC 9343 | 4 |
| Bacteroides helcogenes | 1 |
| Bacteroides ovatus | 4 |
| Bacteroides salanitronis | 1 |
| Bacteroides sp. DeMoss 69 | 1 |
| Bacteroides thetaiotaomicron | 8 |
| Bacteroides thetaiotaomicron VPI-5482 | 2 |
| Bacteroides vulgatus | 6 |
| Bacteroides vulgatus ATCC 8482 | 2 |
| Balansia obtecta | 1 |
| Barnadesia spinosa | 1 |
| Barnettozyma californica | 1 |
| Barnettozyma pratensis | 1 |
| Batis maritima | 1 |
| Beauveria bassiana | 2 |
| Beggiatoa | 1 |
| Bemisia tabaci | 1 |
| Berberis | 1 |
| Berberis beaniana | 1 |
| Berberis stolonifera | 2 |
| Berberis wilsoniae | 3 |
| Beta vulgaris | 2 |
| Beta vulgaris vulgaris | 2 |
| Betula | 1 |
| Betula platyphylla japonica | 2 |
| Betula pubescens | 1 |
| Bifidobacterium adolescentis | 2 |
| Bifidobacterium animalis lactis | 2 |
| Bifidobacterium bifidum | 2 |
| Bifidobacterium longum | 3 |
| Bifidobacterium longum SBT2928 | 2 |
| Bilophila wadsworthia 3_1_6 | 1 |
| Bilophila wadsworthia RZATAU | 4 |
| Bixa orellana | 2 |
| Blaberus discoidalis | 1 |
| Blaberus giganteus | 1 |
| Blastochloris viridis | 4 |
| Blatta orientalis | 1 |
| Blautia producta | 2 |
| Blautia producta K 2/25.1 | 1 |
| Blighia sapida | 1 |
| Bombyx mori | 4 |
| Borago officinalis | 1 |
| Bordetella bronchiseptica | 1 |
| Bordetella bronchiseptica RB50 | 1 |
| Bordetella parapertussis | 1 |
| Bordetella pertussis | 9 |
| Bordetella sp. 10d | 2 |
| Borreliella burgdorferi | 2 |
| Bos taurus | 24 |
| Botryococcus braunii | 2 |
| Botryococcus braunii BOT22 | 1 |
| Botryococcus braunii BOT88-2 | 1 |
| Botryococcus braunii race L | 1 |
| Botrytis cinerea | 4 |
| Brachybacterium conglomeratum | 1 |
| Brachymonas petroleovorans CHX | 1 |
| Bradyrhizobium diazoefficiens | 1 |
| Bradyrhizobium diazoefficiens USDA 110 | 1 |
| Bradyrhizobium elkanii | 3 |
| Bradyrhizobium japonicum | 13 |
| Bradyrhizobium sp. JS329 | 1 |
| Bradyrhizobium sp. RD5-C2 | 3 |
| Bradyrhizobium sp. SEMIA 6144 | 1 |
| Brassica juncea | 6 |
| Brassica napus | 18 |
| Brassica nigra | 1 |
| Brassica oleracea | 3 |
| Brassica oleracea botrytis | 2 |
| Brassica oleracea italica | 1 |
| Brassica rapa | 2 |
| Brevibacillus agri | 2 |
| Brevibacillus brevis S1 | 4 |
| Brevibacillus laterosporus | 1 |
| Brevibacterium | 1 |
| Brevibacterium epidermidis | 1 |
| Brevibacterium fuscum | 3 |
| Brevibacterium helvolum | 3 |
| Brevibacterium iodinum | 1 |
| Brevibacterium linens | 2 |
| Brevibacterium sp. DPO 1361 | 1 |
| Brevibacterium sterolicum | 1 |
| Brevundimonas aurantiaca | 1 |
| Brevundimonas diminuta | 1 |
| Brevundimonas sp. SD212 | 2 |
| Brevundimonas vesicularis | 2 |
| Brochothrix thermosphacta | 2 |
| Bromus inermis | 1 |
| Brucella abortus | 6 |
| Brucella melitensis | 5 |
| Bruguiera gymnorhiza | 2 |
| Burkholderia ambifaria AMMD | 1 |
| Burkholderia cenocepacia | 1 |
| Burkholderia cenocepacia J2315 | 3 |
| Burkholderia cepacia | 12 |
| Burkholderia cepacia 2CBS | 1 |
| Burkholderia cepacia complex | 1 |
| Burkholderia cepacia JS850 | 1 |
| Burkholderia cepacia R34 | 1 |
| Burkholderia gladioli | 2 |
| Burkholderia glumae | 3 |
| Burkholderia lata | 2 |
| Burkholderia mallei | 1 |
| Burkholderia plantarii | 2 |
| Burkholderia pseudomallei | 3 |
| Burkholderia pyrrocinia | 2 |
| Burkholderia sp. AK-5 | 1 |
| Burkholderia sp. DNT | 1 |
| Burkholderia sp. FA1 | 1 |
| Burkholderia sp. JB1 | 1 |
| Burkholderia sp. JS150 | 1 |
| Burkholderia sp. JS667 | 2 |
| Burkholderia sp. NK8 | 1 |
| Burkholderia sp. RASC | 3 |
| Burkholderia sp. WS | 2 |
| Burkholderia terrae KU-15 | 2 |
| Burkholderia thailandensis | 3 |
| Busycotypus canaliculatus | 1 |
| Butyrivibrio fibrisolvens | 1 |
| Byrsotria fumigata | 1 |
| Cadra cautella | 1 |
| Caenorhabditis elegans | 4 |
| Caldanaerobacter subterraneus tengcongensis | 3 |
| Caldicellulosiruptor saccharolyticus | 1 |
| Calendula officinalis | 2 |
| Camellia irrawadiensis | 2 |
| Camellia ptilophylla | 3 |
| Camellia sinensis | 11 |
| Camellia sinensis assamica | 3 |
| Camellia sinensis sinensis | 1 |
| Camellia taliensis | 1 |
| Camptotheca acuminata | 2 |
| Campylobacter coli | 3 |
| Campylobacter fetus | 1 |
| Campylobacter jejuni | 14 |
| Campylobacter jejuni jejuni 81-176 | 1 |
| Campylobacter jejuni jejuni 81116 | 2 |
| Campylobacter jejuni jejuni NCTC 11168 = ATCC 700819 | 3 |
| Canavalia ensiformis | 2 |
| Canavalia lineata | 2 |
| Candida albicans | 3 |
| Candida albicans SC5314 | 1 |
| Candida cariosilignicola | 1 |
| Candida cloacae | 1 |
| Candida entomophila | 1 |
| Candida freyschussii | 1 |
| Candida karawaiewii | 1 |
| Candida maltosa | 2 |
| Candida maltosa L4 | 1 |
| Candida methanolovescens | 3 |
| Candida methylica | 1 |
| Candida sequanensis | 1 |
| Candida silvanorum | 1 |
| Candida solani | 1 |
| Candida sorboxylosa | 1 |
| Candida tropicalis | 2 |
| Candidatus Anammoxoglobus | 1 |
| Candidatus Arcobacter sulfidicus | 1 |
| Candidatus Brocadia anammoxidans | 1 |
| Candidatus Jettenia caeni | 1 |
| Candidatus Kuenenia stuttgartiensis | 1 |
| Candidatus Methylomirabilis oxyfera | 2 |
| Candidatus Pelagibacter ubique HTCC1062 | 1 |
| Candidatus Scalindua brodae | 1 |
| Candidatus Scalindua wagneri | 1 |
| Candidatus Thiodictyon syntrophicum Cad16 | 1 |
| Canis lupus familiaris | 1 |
| Cannabis sativa | 5 |
| Cantharellus formosus | 1 |
| Capnocytophaga gingivalis | 2 |
| Capnocytophaga ochracea | 2 |
| Capnocytophaga sputigena | 2 |
| Capra hircus | 3 |
| Capsicum | 1 |
| Capsicum annuum | 12 |
| Capsicum baccatum | 1 |
| Capsicum chinense | 2 |
| Capsicum frutescens | 1 |
| Carapichea ipecacuanha | 1 |
| Carassius auratus | 1 |
| Carboxydothermus hydrogenoformans | 1 |
| Carcinus maenas | 1 |
| Carica papaya | 1 |
| Carthamus tinctorius | 8 |
| Carum carvi | 1 |
| Caryophyllaceae | 1 |
| Caryophyllales | 1 |
| Cassia coluteoides | 1 |
| Castellaniella defragrans | 2 |
| Castellaniella denitrificans | 2 |
| Catharanthus roseus | 30 |
| Caulobacter vibrioides | 1 |
| Caulobacter vibrioides CB15 | 3 |
| Caulobacter vibrioides NA1000 | 1 |
| Cavia porcellus | 8 |
| Cellana grata | 1 |
| Cellulomonas biazotea | 2 |
| Cellulomonas fimi | 1 |
| Cellulomonas flavigena | 1 |
| Cellulosimicrobium cellulans | 1 |
| Celosia cristata | 2 |
| Centaurium erythraea | 1 |
| Cephalocereus senilis | 1 |
| Cerastium arvense | 1 |
| Ceratodon purpureus | 1 |
| Cestrum elegans | 1 |
| Chaetomium globosum | 1 |
| Chamaecyparis obtusa | 1 |
| Chelatococcus asaccharovorans | 1 |
| Chlamydia abortus | 2 |
| Chlamydia caviae | 2 |
| Chlamydia felis | 2 |
| Chlamydia muridarum | 2 |
| Chlamydia pneumoniae | 2 |
Chlamydia psittaci |
1 | |
| Chlamydia trachomatis | 7 |
| Chlamydia trachomatis D/UW-3/CX | 1 |
| Chlamydomonas | 1 |
| Chlamydomonas reinhardtii | 20 |
| Chlorella sp. (Roon 68) | 2 |
| Chlorobaculum limnaeum | 3 |
| Chlorobaculum tepidum | 13 |
| Chlorobaculum tepidum TLS | 2 |
| Chlorobaculum thiosulfatiphilum | 4 |
| Chlorobium | 1 |
| Chlorobium limicola | 6 |
| Chlorobium phaeobacteroides BS1 | 3 |
| Chlorobium phaeobacteroides DSM 266 | 3 |
| Chlorobium phaeovibrioides DSM 265 | 1 |
| Chloroflexus aggregans | 1 |
| Chloroflexus aurantiacus | 2 |
| Chloroflexus aurantiacus J-10-fl | 2 |
| Chlorogloeopsis fritschii | 1 |
| Chlorophyta | 1 |
| Chondromyces apiculatus | 1 |
| Chondrus crispus | 1 |
| Chromatium | 1 |
| chromatium vinosum strain D | 1 |
| Chromobacterium violaceum | 6 |
| Chromobacterium violaceum ATCC 12472 | 1 |
| Chromohalobacter beijerinckii | 3 |
| Chromohalobacter salexigens | 3 |
| Chromohalobacter salexigens DSM 3043 | 4 |
| Chrysanthemum x morifolium | 1 |
| Chrysiogenes arsenatis | 1 |
| Chrysopa | 1 |
| Chrysosplenium americanum | 4 |
| Chrysosporium keratinophilum | 1 |
| Chrysosporium lucknowense | 1 |
| Cicer arietinum | 14 |
| Cichorium intybus | 4 |
| Cinchona | 1 |
| Cinchona calisaya | 1 |
| Cinchona macrocalyx | 1 |
| Cinchona mutisii | 1 |
| Cinchona officinalis | 1 |
| Cinchona pitayensis | 1 |
| Cinchona pubescens | 1 |
| Cinnamomum tenuipile | 1 |
| Cistus creticus | 2 |
| Citeromyces matritensis | 1 |
| Citrobacter amalonaticus | 2 |
| Citrobacter freundii | 9 |
| Citrobacter intermedius | 1 |
| Citrobacter sp. S-77 | 1 |
| Citrullus lanatus vulgaris | 1 |
| Citrus aurantium | 2 |
| Citrus clementina | 1 |
| Citrus hanaju | 1 |
| Citrus japonica | 2 |
| Citrus junos | 1 |
| Citrus maxima | 4 |
| Citrus sinensis | 5 |
| Citrus trifoliata | 1 |
| Citrus unshiu | 3 |
| Citrus x microcarpa | 1 |
| Citrus x paradisi | 5 |
| Cladophora | 1 |
| Cladosporium cladosporioides | 1 |
| Clarkia breweri | 6 |
| Clavibacter insidiosus | 3 |
| Clavibacter michiganensis | 3 |
| Clavibacter michiganensis michiganensis | 1 |
| Clavibacter nebraskensis | 3 |
| Clavibacter sepedonicus | 3 |
| Claviceps fusiformis | 1 |
| Claviceps purpurea | 2 |
| Clavispora lusitaniae | 1 |
| Cleretum bellidiforme | 1 |
| Clitoria ternatea | 2 |
| Clostridioides difficile | 3 |
| Clostridioides difficile 630 | 1 |
| Clostridioides difficile ATCC 9689 = DSM 1296 | 1 |
| Clostridioides difficile CD196 | 1 |
| Clostridium | 3 |
| Clostridium aceticum | 1 |
| Clostridium acetobutylicum | 15 |
| Clostridium acetobutylicum ATCC 824 | 10 |
| Clostridium aminobutyricum | 1 |
| Clostridium beijerinckii | 7 |
| Clostridium bifermentans DPH-1 | 1 |
| Clostridium botulinum | 8 |
| Clostridium botulinum A str. ATCC 19397 | 2 |
| Clostridium butyricum | 3 |
| Clostridium cellulovorans | 2 |
| Clostridium cochlearium | 2 |
| Clostridium colicanis | 1 |
| Clostridium cylindrosporum | 2 |
| Clostridium formicaceticum | 3 |
| Clostridium innocuum D1144/3 | 1 |
| Clostridium kluyveri | 5 |
| Clostridium magnum | 1 |
| Clostridium malenominatum | 1 |
| Clostridium paraputrificum D 762-06 | 1 |
| Clostridium pasteurianum | 10 |
| Clostridium peptidivorans | 1 |
| Clostridium perfringens | 4 |
| Clostridium perfringens 13 | 2 |
| Clostridium perfringens A99 | 1 |
| Clostridium saccharobutylicum | 4 |
| Clostridium SB4 | 1 |
| Clostridium sp. ATCC 29733 | 1 |
| Clostridium sp. TO-931 | 1 |
| Clostridium sporogenes | 11 |
| Clostridium subterminale | 1 |
| Clostridium tetani | 1 |
| Clostridium tetanomorphum | 4 |
| Clostridium ventriculi | 1 |
| Coccinella | 1 |
| Coffea abeokutae | 1 |
| Coffea arabica | 4 |
| Coffea canephora | 2 |
| Coffea eugenioides | 1 |
| Coffea liberica | 1 |
| Coffea liberica dewevrei | 1 |
| Coix lacryma-jobi | 2 |
| Colchicum autumnale | 1 |
| Collimonas sp. CT | 1 |
| Collinsella tanakaei | 1 |
| Colwellia psychrerythraea 34H | 1 |
| Comamonas sp. E6 | 1 |
| Comamonas sp. JS765 | 3 |
| Comamonas testosteroni | 8 |
| Comamonas testosteroni 63 | 1 |
| Comamonas testosteroni CNB-1 | 2 |
| Comamonas testosteroni JH5 | 1 |
| Comamonas testosteroni KF-1 | 1 |
| Comamonas testosteroni T-2 | 3 |
| Comamonas testosteroni TA441 | 2 |
| Coniochaeta ligniaria | 1 |
| Conium maculatum | 1 |
| Consolida orientalis | 1 |
| Coptis japonica | 4 |
| Coptis japonica dissecta | 1 |
| Coraliomargarita akajimensis DSM 45221 | 1 |
| Corallococcus coralloides | 2 |
| Corbicula japonica | 1 |
| Coreopsis grandiflora | 2 |
| Coriandrum sativum | 1 |
| Corydalis cava | 1 |
| Corydalis saxicola | 1 |
| Corydalis vaginans | 2 |
| Corynebacterium ammoniagenes | 1 |
| Corynebacterium bovis | 1 |
| Corynebacterium callunae | 1 |
| Corynebacterium diphtheriae | 6 |
| Corynebacterium flavescens | 3 |
| Corynebacterium glutamicum | 21 |
| Corynebacterium glutamicum ATCC 13032 | 14 |
| Corynebacterium glutamicum R | 2 |
| Corynebacterium kutscheri | 1 |
| Corynebacterium matruchotii | 1 |
| Corynebacterium nephridii | 1 |
| Corynebacterium pseudotuberculosis | 1 |
| Corynebacterium renale | 1 |
| Corynebacterium sp | 2 |
| Corynebacterium sp. B6 | 1 |
| Corynebacterium sp. SHS 0007 | 1 |
| Corynebacterium sp. strain SY1 | 1 |
| Corynebacterium stationis | 1 |
| Corynebacterium ulcerans | 1 |
| Corynebacterium variabile | 1 |
| Corynebacterium xerosis | 1 |
| Crambe hispanica abyssinica | 1 |
| Crassostrea gigas | 3 |
| Crepis alpina | 1 |
| Crepis palaestina | 1 |
| Crithidia fasciculata | 3 |
| Crocus sativus | 3 |
| Croton | 1 |
| Croton stellatopilosus | 2 |
| Croton sublyratus | 1 |
| Crypthecodinium cohnii | 1 |
| Cryptobacterium sp. CAG:338 | 1 |
| Cryptococcus albidus IFO 0939 | 1 |
| Cryptomeria japonica | 2 |
| Cryptosporidium parvum | 2 |
| Ctenomyces serratus | 1 |
| Cucumis melo | 5 |
| Cucumis sativus | 17 |
| Cucurbita maxima | 4 |
| Cucurbita pepo | 1 |
| Cucurbita pepo Early Prolific Straightneck | 1 |
| Cucurbita pepo medullosa | 1 |
| Cuphea wrightii | 1 |
| Cupressus | 1 |
| Cupriavidus basilensis | 2 |
| Cupriavidus metallidurans | 1 |
| Cupriavidus metallidurans CH34 | 4 |
| Cupriavidus necator | 17 |
| Cupriavidus necator H16 | 9 |
| Cupriavidus oxalaticus | 1 |
| Cupriavidus pinatubonensis JMP134 | 11 |
| Cupriavidus sp. PS12 | 15 |
| Cupriavidus sp. WS | 1 |
| Curcuma longa | 2 |
| Curtobacterium albidum | 3 |
| Curtobacterium citreum | 3 |
| Curtobacterium flaccumfaciens | 4 |
| Curtobacterium luteum | 3 |
| Cutaneotrichosporon cutaneum | 4 |
| Cutaneotrichosporon moniliiforme | 1 |
| Cutibacterium acnes | 5 |
| Cyanidioschyzon merolae strain 10D | 1 |
| Cyanidium caldarium | 3 |
| Cyanobium gracile PCC 6307 | 1 |
| Cyanothece sp. ATCC 51142 | 3 |
| Cyanothece sp. PCC 7425 | 2 |
| Cyberlindnera jadinii | 6 |
| Cyberlindnera mrakii | 2 |
| Cyberlindnera saturnus | 2 |
| Cyclotella meneghiniana | 2 |
| Cydia pomonella | 1 |
| Cylindrocarpon didymum | 1 |
| Cymbopogon flexuosus | 1 |
| Cymbopogon martinii | 1 |
| Cyperus iria | 1 |
| Cystobacter fuscus | 1 |
| Cytophaga hutchinsonii | 2 |
| Dahlia pinnata | 5 |
| Dalbergia cochinchinensis | 1 |
| Dalbergia nigrescens | 1 |
| Danio rerio | 3 |
| Daphne odora | 2 |
| Datura inoxia | 1 |
| Datura stramonium | 5 |
| Daucus carota | 9 |
| Davallia trichomanoides | 1 |
| Debaryomyces hansenii hansenii CBS767 | 1 |
| Dechloromonas agitata | 1 |
| Dechloromonas aromatica | 2 |
| Dechloromonas sp. MissR | 1 |
| Dechloromonas sp. PC1 | 1 |
| Dehalobacter restrictus | 1 |
| Dehalococcoides mccartyi | 2 |
| Dehalococcoides mccartyi VS | 1 |
| Deinococcus radiodurans | 11 |
| Deinococcus radiodurans R1 | 1 |
| Deinococcus radiophilus | 1 |
| Delftia acidovorans | 18 |
| Delftia acidovorans 7N | 1 |
| Delftia sp. AN3 | 1 |
| Delftia tsuruhatensis AD9 | 1 |
| Delphinium grandiflorum | 5 |
| delta proteobacterium N47 | 1 |
| Dermatophilus congolensis | 3 |
| Derris elliptica | 1 |
| Desmodium uncinatum | 2 |
| Desmonostoc muscorum | 2 |
| Desulfitobacterium chlororespirans | 1 |
| Desulfitobacterium hafniense | 2 |
| Desulfitobacterium hafniense DCB-2 | 1 |
| Desulfitobacterium hafniense Y51 | 1 |
| Desulfobacter hydrogenophilus | 1 |
| Desulfobacterium autotrophicum | 3 |
| Desulfobacterium niacini | 1 |
| Desulfobacterium sp. PM4 | 1 |
| Desulfobacterium vacuolatum | 1 |
| Desulfobulbus | 1 |
| Desulfobulbus propionicus | 3 |
| Desulfocapsa | 1 |
| Desulfocapsa sulfexigens | 2 |
| Desulfocapsa thiozymogenes | 1 |
| Desulfococcus biacutus | 1 |
| Desulfomicrobium baculatum | 1 |
| Desulfonispora thiosulfatigenes GKNTAU | 2 |
| Desulfosarcina cetonica | 1 |
| Desulfosporosinus acidiphilus | 1 |
| Desulfosporosinus youngiae | 1 |
| Desulfotomaculum australicum | 1 |
| Desulfotomaculum geothermicum | 1 |
| Desulfotomaculum kuznetsovii | 1 |
| Desulfotomaculum nigrificans | 5 |
| Desulfovibrio alaskensis G20 | 1 |
| Desulfovibrio desulfuricans | 9 |
| Desulfovibrio fructosivorans | 1 |
| Desulfovibrio gigas | 6 |
| Desulfovibrio multispirans | 2 |
| Desulfovibrio sulfodismutans | 2 |
| Desulfovibrio vulgaris | 6 |
| Desulfovibrio vulgaris Hildenborough | 1 |
| Desulfurobacterium thermolithotrophum | 1 |
| Desulfurococcus mucosus | 1 |
| Desulfuromonas acetexigens | 1 |
| Desulfuromonas acetoxidans | 2 |
| Desulfuromonas acetoxidans DSM 684 | 1 |
| Diacrisia sannio | 1 |
| Dianthus caryophyllus | 13 |
| Diaporthe amygdali | 3 |
| Dickeya chrysanthemi | 5 |
| Dickeya dadantii | 1 |
| Dickeya dadantii 3937 | 3 |
| Dicranum scoparium | 1 |
| Dictyocaulus viviparus | 1 |
| Dictyostelium discoideum | 4 |
| Dietzia sp. CQ4 | 1 |
| Digitalis | 2 |
| Digitalis lanata | 2 |
| Digitalis purpurea | 2 |
| Dimorphandra mollis | 1 |
| Dimorphotheca sinuata | 1 |
| Dinoroseobacter shibae DFL 12 = DSM 16493 | 1 |
| Diospyros kaki | 1 |
| Diploptera punctata | 1 |
| Diutina catenulata | 1 |
| Diutina rugosa | 1 |
| Dolichandra unguis-cati | 1 |
| Domibacillus aminovorans | 2 |
| Dorea longicatena | 1 |
| Doryteuthis pealeii | 1 |
Drosophila |
1 | |
| Drosophila melanogaster | 12 |
| Dryopteris crassirhizoma | 1 |
| DSMP-degrading bacterium LFR | 1 |
| Duganella sp. B2 | 1 |
| Dugesia japonica | 1 |
| Ectocarpus siliculosus | 2 |
| Ectothiorhodospira haloalkaliphila | 1 |
| Ectothiorhodospira shaposhnikovii | 1 |
| Edwardsiella tarda | 2 |
| Eggerthella lenta | 1 |
| Eggerthella lenta DSM 2243 | 3 |
| Eimeria | 1 |
| Eimeria tenella | 1 |
| Eisenibacter elegans | 4 |
| Emiliania huxleyi | 2 |
| Endocladia muricata | 1 |
| endosymbiont of Riftia pachyptila | 1 |
| Enhygromyxa salina | 2 |
| Ensifer adhaerens | 1 |
| Entamoeba histolytica | 3 |
| Enterobacter asburiae | 1 |
| Enterobacter cloacae | 1 |
| Enterobacter hormaechei | 1 |
| Enterococcus casseliflavus | 2 |
| Enterococcus faecalis | 16 |
| Enterococcus faecium | 3 |
| Enterococcus gallinarum | 1 |
| Enterococcus raffinosus | 1 |
| Ephedra gerardiana | 1 |
| Epichloe festucae | 3 |
| Epichloe hybrida | 1 |
| Equisetum arvense | 2 |
| Erwinia amylovora | 2 |
| Erwinia chrysanthemi EC16 | 2 |
| Erwinia sp | 1 |
| Erysiphaceae | 1 |
| Erythrobacter longus | 1 |
| Erythrobacter sp. SD-21 | 1 |
| Erythroxylum coca | 1 |
| Escherichia coli | 2 |
| Escherichia coli B | 7 |
| Escherichia coli B SPAO | 1 |
| Escherichia coli BL21(DE3) | 1 |
| Escherichia coli C | 4 |
| Escherichia coli CFT073 | 2 |
| Escherichia coli Crookes | 1 |
| Escherichia coli J53-1 | 1 |
| Escherichia coli K-12 | 2 |
| Escherichia coli K-12 substr. DH10B | 1 |
| Escherichia coli K-12 substr. MG1655 | 351 |
| Escherichia coli K-12 substr. MG1656 | 2 |
| Escherichia coli K1 | 1 |
| Escherichia coli K4 | 1 |
| Escherichia coli O104 | 1 |
| Escherichia coli O108 | 1 |
| Escherichia coli O111:NM | 1 |
| Escherichia coli O113 | 1 |
| Escherichia coli O157:H7 | 4 |
| Escherichia coli O26 | 1 |
| Escherichia coli O44:K74 | 1 |
| Escherichia coli O5 | 1 |
| Escherichia coli O52 | 1 |
| Escherichia coli O7:K1 | 1 |
| Escherichia coli O86 | 1 |
| Escherichia coli O86:B7 | 1 |
| Escherichia coli O98 | 1 |
| Escherichia coli O9a | 1 |
| Escherichia coli UTI89 | 1 |
| Escherichia coli W | 7 |
| Eschscholzia californica | 4 |
| Estigmene acrea | 1 |
| Eubacterium barkeri | 1 |
| Eubacterium limosum | 2 |
| Eubacterium oxidoreducens G41 | 1 |
| Eucalyptus piperita | 1 |
| Eudoraea adriatica | 1 |
| Euglena | 1 |
| Euglena gracilis | 16 |
| Eukaryota | 1 |
| Euonymus alatus | 1 |
| Euphorbia lagascae | 1 |
| Eustoma exaltatum russellianum | 2 |
| Exiguobacterium acetylicum | 2 |
| Fagopyrum esculentum | 8 |
| Fagopyrum tataricum | 3 |
| Fagus crenata | 1 |
| Fasciola hepatica | 3 |
| Faxonius limosus | 1 |
| Felis catus | 2 |
| Fervidobacterium nodosum | 1 |
| Fischerella ambigua UTEX 1903 | 2 |
| Fischerella muscicola UTEX 1829 | 1 |
| Fischerella sp. ATCC 43239 | 1 |
| Fischerella sp. SAG 46.79 | 1 |
| Flammulina velutipes | 3 |
| Flaveria bidentis | 2 |
| Flaveria chlorifolia | 1 |
| Flavobacterium johnsoniae | 1 |
| Flavobacterium johnsoniae UW101 | 1 |
| Fluoribacter bozemanae | 1 |
| Fluviicola taffensis | 1 |
| Foeniculum vulgare | 5 |
| Foeniculum vulgare dulce | 1 |
| Fomitopsis palustris | 1 |
| Forsythia koreana | 1 |
| Forsythia x intermedia | 1 |
| Fragaria | 2 |
| Fragaria x ananassa | 2 |
| Francisella tularensis novicida U112 | 1 |
| Francisella tularensis tularensis SCHU S4 | 1 |
| Frateuria sp. ANA-18 | 1 |
| Freesia hybrid cultivar | 1 |
| Fucus gardneri | 1 |
| Fulvimarina pelagi HTCC2506 | 1 |
| Fusarium anguioides | 1 |
| Fusarium Caucasicum | 1 |
| Fusarium fujikuroi | 10 |
| Fusarium graminearum | 4 |
| Fusarium graminearum 70E1 | 1 |
| Fusarium graminearum 79A1 | 1 |
| Fusarium graminearum 88-1 | 1 |
| Fusarium graminearum GZ3639 | 1 |
| Fusarium heterosporum | 2 |
| Fusarium incarnatum | 1 |
| Fusarium lateritium | 1 |
| Fusarium oxysporum | 6 |
| Fusarium oxysporum sp. lycopersici | 1 |
| Fusarium phaseoli | 1 |
| Fusarium solani | 3 |
| Fusarium sporotrichioides | 2 |
| Fusarium verticillioides | 2 |
| Fusobacterium nucleatum | 4 |
| Fusobacterium varium | 1 |
| Galanthus elwesii | 1 |
| Galium mollugo | 2 |
| Galleria mellonella | 2 |
| Gallus gallus | 11 |
| gamma proteobacterium HTCC2207 | 1 |
| Gardenia jasminoides | 2 |
| Gelatoporia subvermispora | 1 |
| Geminocystis herdmanii PCC 6308 | 2 |
| Gemmata obscuriglobus | 3 |
| Gemmata sp. Wa1-1 | 1 |
| Gentiana straminea | 2 |
| Gentiana triflora | 2 |
| Geobacillus kaustophilus | 1 |
| Geobacillus stearothermophilus | 16 |
| Geobacillus thermodenitrificans NG80-2 | 1 |
| Geobacter sulfurreducens | 1 |
| Geotrichum sp. M128 | 1 |
| Gerbera hybrid cultivar | 2 |
| Giardia intestinalis | 3 |
| Ginkgo biloba | 5 |
| Glandularia x hybrida | 2 |
| Glebionis segetum | 2 |
| Gloeobacter violaceus | 6 |
| Gloeobacter violaceus PCC 7421 | 2 |
| Gluconobacter | 1 |
| Gluconobacter albidus | 2 |
| Gluconobacter cerinus | 2 |
| Gluconobacter oxydans | 7 |
| Gluconobacter oxydans IFO 3255 | 1 |
| Gluconobacter oxydans UV10 | 1 |
| Glutamicibacter nicotianae | 2 |
| Glutamicibacter protophormiae | 3 |
| Glycine max | 66 |
| Glycyrrhiza echinata | 9 |
| Glycyrrhiza glabra | 8 |
| Glycyrrhiza uralensis | 1 |
| Gordonia amarae | 1 |
| Gordonia bronchialis | 3 |
| Gordonia polyisoprenivorans | 1 |
| Gordonia rubripertincta | 5 |
| Gordonia sp. TY-5 | 1 |
| Gordonia terrae | 3 |
| Gordonia westfalica | 1 |
| Gossypium arboreum | 3 |
| Gossypium barbadense | 3 |
| Gossypium hirsutum | 4 |
| Gottschalkia acidurici | 2 |
| Gottschalkia purinilyticum | 2 |
| Gracilariopsis lemaneiformis | 1 |
| Gracilariopsis longissima | 1 |
| Gram-negative bacterium ASV2 | 1 |
| Graphiola phoenicis | 1 |
| Grifola frondosa | 1 |
| Guatteria blepharophylla | 1 |
| Guatteria friesiana | 1 |
| Guatteria hispida | 1 |
| Gymnoascus demonbreunii | 1 |
| Gypsophila vaccaria | 1 |
| Gyrinops | 1 |
| Haematococcus lacustris | 1 |
| Haemonchus contortus | 1 |
| Haemophilus influenzae | 7 |
| Haemophilus influenzae Rd KW20 | 8 |
| Haemophilus parainfluenzae | 2 |
| Halalkalicoccus | 1 |
| Haliangium ochraceum | 1 |
| Halichondria japonica | 1 |
| Haliotis tuberculata lamellosa | 1 |
| Haloarcula | 1 |
| Haloarcula japonica | 1 |
| Haloarcula marismortui | 6 |
| Halobacteria | 2 |
| Halobacterium salinarum | 11 |
| Halobacterium salinarum NRC-1 | 2 |
| Halobacterium sp. JP-6 | 1 |
| Halobacterium sp. NCIMB 763 | 1 |
| Halococcus morrhuae | 2 |
| Halococcus saccharolyticus | 3 |
| Halodesulfovibrio aestuarii DSM 10141 | 1 |
| Haloferax | 1 |
| Haloferax mediterranei | 4 |
| Haloferax sp. D1227 | 1 |
| Haloferax volcanii | 14 |
| Halomicrobium | 1 |
| Halomonas elongata | 2 |
| Halomonas elongata DSM 2581 | 2 |
| Halomonas halmophila | 2 |
| Halomonas halodenitrificans | 2 |
| Halomonas sp. HTNK1 | 1 |
| Halorhodospira abdelmalekii | 1 |
| Halorhodospira halochloris | 3 |
| Halorhodospira halophila | 2 |
| Halorubrum lacusprofundi | 1 |
| Halorubrum saccharovorum | 5 |
| Halorubrum trapanicum | 2 |
| Haloterrigena | 1 |
| Hapsidospora irregularis | 2 |
| Hathewaya limosa | 1 |
| Hedera helix | 1 |
| Hedychium | 1 |
| Helianthus annuus | 1 |
| Helianthus tuberosus | 2 |
| Helicobacter bizzozeronii CIII-1 | 1 |
| Helicobacter pylori | 10 |
| Helicobacter pylori 26695 | 9 |
| Helicobacter pylori DMS 6709 | 1 |
| Helicobacter pylori SS1 | 1 |
| Helicoverpa armigera | 1 |
| Heliobacterium modesticaldum Ice1 | 1 |
| Herbaspirillum autotrophicum | 1 |
| Herbaspirillum huttiense strain NRRL B-12228 | 2 |
| Herbaspirillum seropedicae | 1 |
| Herminiimonas arsenicoxydans | 1 |
| Hevea brasiliensis | 6 |
| Hippophae rhamnoides | 1 |
| Homo sapiens | 307 |
| Hordeum lechleri | 1 |
| Hordeum vulgare | 26 |
| Hormoscilla spongeliae SP12 | 2 |
| human intestinal bacterium SNU-Julong732 | 1 |
| Humulus lupulus | 4 |
| Hydrangea macrophylla | 1 |
| Hydrogenibacillus schlegelii | 1 |
| Hydrogenobacter thermophilus | 2 |
| Hydrogenophaga | 1 |
| Hydrogenophaga flava | 1 |
| Hydrogenophaga flava ENV735 | 1 |
| Hydrogenophaga intermedia | 1 |
| Hydrogenophaga palleronii | 1 |
| Hydrogenophaga palleronii JS863 | 1 |
| Hydrogenophaga pseudoflava | 1 |
| Hydrogenophilus thermoluteolus | 1 |
| Hyoscyamus albus | 2 |
| Hyoscyamus muticus | 1 |
| Hyoscyamus niger | 3 |
| Hypericum androsaemum | 3 |
| Hypericum calycinum | 2 |
| Hypericum perforatum | 3 |
| Hyperthermus butylicus | 2 |
| Hyphomicrobium denitrificans WU-K217 | 1 |
| Hyphomicrobium methylovorum GM2 | 2 |
| Hyphomicrobium sp. EG | 2 |
| Hyphomicrobium sp. S | 2 |
| Hyphomicrobium sulfonivorans | 3 |
| Hyphomicrobium zavarzinii ZV580 | 4 |
| Hyphopichia burtonii | 1 |
| Hyphopichia homilentoma | 1 |
| Ideonella dechloratans | 1 |
| Ideonella sakaiensis | 2 |
| Ignicoccus | 1 |
| Ignicoccus hospitalis | 2 |
| Impatiens balsamina | 2 |
| Ipomoea batatas | 6 |
| Ipomoea nil | 3 |
| Ipomoea purpurea | 1 |
| Ips confusus | 1 |
| Ips paraconfusus | 1 |
| Ips pini | 1 |
| Isatis tinctoria | 1 |
| Isochrysis galbana | 3 |
| Jacquinia angustifolia | 1 |
| Janthinobacterium lividum | 1 |
| Jasminum grandiflorum | 1 |
| Jeotgalicoccus sp. ATCC 8456 | 1 |
| Jonesia denitrificans | 3 |
| Juglans regia | 3 |
| Kalanchoe daigremontiana | 1 |
| Kandelia candel | 3 |
| Keratinophyton hispanicum | 1 |
| Keratinophyton saturnoideum | 1 |
| Keratinophyton terreum | 1 |
| Ketogulonicigenium vulgare | 1 |
| Ketogulonicigenium vulgare DSM 4025 | 1 |
| Kitasatospora aureofaciens | 5 |
| Kitasatospora griseola MF730-N6 MF730-N6 | 1 |
| Kitasatospora phosalacinea | 1 |
| Klebsiella aerogenes | 27 |
| Klebsiella michiganensis M5al | 2 |
| Klebsiella oxytoca | 4 |
| Klebsiella oxytoca TauN1 | 2 |
| Klebsiella pneumoniae | 28 |
| Klebsiella pneumoniae O3 | 1 |
| Klebsiella pneumoniae pneumoniae MGH 78578 | 1 |
| Kluyveromyces lactis | 1 |
| Kluyveromyces marxianus | 1 |
| Kocuria rhizophila | 1 |
| Kocuria rosea | 2 |
| Kocuria varians | 1 |
| Komagataeibacter xylinus | 3 |
| Komagataella pastoris | 3 |
| Komagataella phaffii GS115 | 1 |
| Kregervanrija fluxuum | 1 |
| Kribbella flavida | 1 |
| Kuraishia capsulata | 1 |
| Labrenzia aggregata | 1 |
| Labrenzia aggregata IAM 12614 | 1 |
| Lachancea kluyveri | 2 |
| Lachnospiraceae bacterium 19gly4 | 1 |
| Lactobacillaceae | 1 |
| Lactobacillus brevis | 5 |
| Lactobacillus buchneri | 2 |
| Lactobacillus casei | 11 |
| Lactobacillus fermentum | 2 |
| Lactobacillus helveticus | 3 |
| Lactobacillus hilgardii | 1 |
| Lactobacillus mali | 4 |
| Lactobacillus paraplantarum | 1 |
| Lactobacillus plantarum | 8 |
| Lactobacillus reuteri | 2 |
| Lactobacillus rhamnosus GG | 1 |
| Lactobacillus salivarius | 1 |
| Lactobacillus sanfranciscensis | 1 |
| Lactobacillus sp. 30A | 1 |
| Lactococcus garvieae 20-92 | 1 |
| Lactococcus lactis | 18 |
| Lactococcus lactis cremoris | 5 |
| Lactococcus lactis lactis | 2 |
| Lactococcus lactis lactis bv. diacetylactis | 2 |
| Lactuca sativa | 1 |
| Lactuca sativa romaine | 8 |
| Laminaria digitata | 1 |
| Lamium galeobdolon | 1 |
| Lampranthus sociorum | 1 |
| Lathyrus odoratus | 1 |
| Lathyrus tingitanus | 1 |
| Lavandula angustifolia | 2 |
| Lawsonia inermis | 1 |
| Lechevalieria aerocolonigenes | 1 |
| Legionella pneumophila | 3 |
| Legionella pneumophila pneumophila Philadelphia 1 | 1 |
| Leifsonia aquatica | 4 |
| Leishmania braziliensis | 1 |
| Leishmania donovani | 1 |
| Leishmania donovani species complex | 1 |
| Leishmania infantum | 1 |
| Leishmania mexicana | 1 |
| Leishmania mexicana species complex | 1 |
| Leishmania tarentolae | 1 |
| Leishmania tropica species complex | 1 |
| Lemna minor | 1 |
| Lemna paucicostata | 1 |
| Lens culinaris | 2 |
| Lentinus sajor-caju | 1 |
| Lentzea albida | 1 |
| Lepidium sativum | 2 |
| Leptolyngbya boryana | 1 |
| Leptospira biflexa serovar Patoc | 1 |
| Leptospira borgpetersenii | 2 |
| Leptospira interrogans | 5 |
| Leptospira interrogans serovar Bataviae | 2 |
| Leptospira interrogans serovar Lai str. 56601 | 2 |
| Leptospira meyeri | 1 |
| Leptothrix discophora strain SS-1 | 1 |
| Leucaena leucocephala | 2 |
| Leuconostoc lactis | 3 |
| Leuconostoc mesenteroides | 3 |
| Leuconostoc mesenteroides cremoris | 5 |
| Leuconostoc mesenteroides dextranicum | 1 |
| Lilium lancifolium | 1 |
| Lilium longiflorum | 1 |
| Limnanthes alba | 3 |
| Limnanthes douglasii | 3 |
| Limonium latifolium | 3 |
| Lingulodinium polyedra | 1 |
| Linum | 1 |
| Linum flavum | 3 |
| Linum nodiflorum | 3 |
| Linum perenne | 2 |
| Linum usitatissimum | 9 |
| Lipomyces starkeyi | 1 |
| Listeria grayi | 2 |
| Listeria innocua | 2 |
| Listeria monocytogenes | 2 |
| Lithospermum erythrorhizon | 5 |
| Littorina littorea | 1 |
| Locusta migratoria | 1 |
| Lophophyton gallinae | 1 |
| Lotus corniculatus | 4 |
| Lotus japonicus | 10 |
| Luciola mingrelica | 1 |
| Luffa aegyptiaca | 1 |
| Lunaria annua | 1 |
| Lupinus albus | 5 |
| Lupinus angustifolius | 4 |
| Lupinus luteus | 11 |
| Lupinus polyphyllus | 1 |
| Lycopersicon hirsutum glabratum | 3 |
| Lygodium circinatum | 1 |
| Lymnaea stagnalis | 1 |
| Lyngbya majuscula | 1 |
| Lysinibacillus sphaericus | 5 |
| Lysobacter dokdonensis | 1 |
| Macaca fuscata | 1 |
| Macaca mulatta | 1 |
| Magnaporthe oryzae | 1 |
| Magnetococcus | 1 |
| Magnetospirillum | 1 |
| Magnolia | 1 |
| Magnolia grandiflora | 2 |
| Magnolia obovata | 1 |
| Malonomonas rubra | 1 |
| Malus domestica | 11 |
| Malus domestica Golden Delicious | 1 |
| Malus domestica Holsteiner Cox | 1 |
| Malus hupehensis | 1 |
| Malus pumila | 1 |
| Malus sp | 1 |
| Mammalia | 15 |
| Manduca sexta | 3 |
| Mangifera indica | 1 |
| Manihot esculenta | 4 |
| Marchantia polymorpha | 1 |
| Maricaulis maris MCS10 | 1 |
| Marichromatium gracile | 1 |
| Marichromatium purpuratum | 1 |
| Marinobacter hydrocarbonoclasticus | 1 |
| Marinobacter hydrocarbonoclasticus VT8 | 1 |
| Marinomonas mediterranea MMB-1 | 4 |
| Marinomonas sp. MED121 | 2 |
| Marinomonas sp. MWYL1 | 2 |
| Marinosulfonomonas methylotropha | 1 |
| Maritimibacter alkaliphilus HTCC2654 | 1 |
| Marphysa sanguinea | 1 |
| Marsupenaeus japonicus | 1 |
| Mastigocladus laminosus | 2 |
| Matthiola incana | 4 |
| Medicago sativa | 13 |
| Medicago truncatula | 17 |
| Megasphaera elsdenii | 2 |
| Megathyrsus maximus | 1 |
| Melampsora epitea | 1 |
| Melilotus albus | 2 |
| Melissa officinalis | 1 |
| Melosira nummuloides | 1 |
| Mentha aquatica citrata | 1 |
| Mentha spicata | 3 |
| Mentha x gracilis | 1 |
| Mentha x piperita | 6 |
| Meretrix lusoria | 1 |
| Mesembryanthemum crystallinum | 2 |
| Mesocricetus auratus | 3 |
| Mesorhizobium loti | 5 |
| Metallosphaera cuprina | 1 |
| Metallosphaera sedula | 3 |
| Metazoa | 1 |
| Methanobacteria | 5 |
| Methanobacterium bryantii | 3 |
| Methanobacterium formicicum | 1 |
| Methanobacterium ivanovii | 1 |
| Methanobrevibacter | 1 |
| Methanobrevibacter arboriphilus | 2 |
| Methanobrevibacter ruminantium | 1 |
| Methanobrevibacter smithii | 2 |
| Methanocaldococcus fervens | 1 |
| Methanocaldococcus jannaschii | 31 |
| Methanococcales | 1 |
| Methanococci | 6 |
| Methanococcoides burtonii | 1 |
| Methanococcoides burtonii DSM 6242 | 1 |
| Methanococcoides sp. NaT1 | 1 |
| Methanococcus | 1 |
| Methanococcus aeolicus | 2 |
| Methanococcus maripaludis | 7 |
| Methanococcus vannielii | 1 |
| Methanococcus voltae | 5 |
| Methanoculleus | 2 |
| Methanoculleus marisnigri | 1 |
| Methanogenium | 3 |
| Methanohalobium evestigatum Z-7303 | 1 |
| Methanohalophilus mahii DSM 5219 | 1 |
| Methanohalophilus portucalensis | 3 |
| Methanolobus tindarius | 1 |
| Methanomicrobia | 4 |
| Methanoplanus | 1 |
| Methanoplanus limicola | 1 |
| Methanopyri | 2 |
| Methanopyrus kandleri AV19 | 1 |
| Methanosarcina | 14 |
| Methanosarcina acetivorans | 12 |
| Methanosarcina acetivorans C2A | 3 |
| Methanosarcina barkeri | 25 |
| Methanosarcina barkeri Fusaro | 1 |
| Methanosarcina mazei | 4 |
| Methanosarcina mazei Go1 | 4 |
| Methanosarcina thermophila | 20 |
| Methanosarcina TM-1 | 10 |
| Methanospirillum | 2 |
| Methanospirillum hungatei | 2 |
| Methanothermobacter marburgensis | 2 |
| Methanothermobacter marburgensis Marburg | 5 |
| Methanothermobacter thermautotrophicus | 19 |
| Methanothermobacter thermautotrophicus Delta H | 5 |
| Methanothermobacter thermautotrophicus Winter | 1 |
| Methanothermus | 4 |
| Methanothermus fervidus | 1 |
| Methanothrix | 1 |
| Methanothrix soehngenii | 1 |
| Methanothrix thermoacetophila | 1 |
| Methylibium petroleiphilum PM1 | 1 |
| Methylobacillus flagellatus | 5 |
| Methylobacillus flagellatus KT | 1 |
| Methylobacter luteus | 1 |
| Methylobacter marinus | 1 |
| Methylobacter whittenburyi | 3 |
| Methylobacterium extorquens | 2 |
| Methylobacterium extorquens AM1 | 11 |
| Methylobacterium extorquens CM4 | 1 |
| Methylobacterium extorquens PA1 | 1 |
| Methylobacterium nodulans | 1 |
| Methylobacterium organophilum | 4 |
| Methylobacterium populi BJ001 | 1 |
| Methyloceanibacter caenitepidi | 1 |
| Methylocella silvestris | 2 |
| Methylococcus capsulatus | 4 |
| Methylococcus capsulatus Bath | 3 |
| Methylococcus thermophilus | 1 |
| Methylocystis echinoides | 3 |
| Methylocystis minimus | 3 |
| Methylocystis parvus | 3 |
| Methylocystis pyriformis | 3 |
| Methylomicrobium agile | 1 |
| Methylomicrobium album | 1 |
| Methylomicrobium alcaliphilum 20Z | 2 |
| Methylomicrobium japanense | 1 |
| Methylomicrobium pelagicum | 1 |
| Methylomonas aminofaciens 77a | 2 |
| Methylomonas aurantiaca | 1 |
| Methylomonas fodinarum | 1 |
| Methylomonas methanica | 1 |
| Methylomonas sp. 16a | 1 |
| Methylomonas sp. J | 2 |
| Methylomonas sp. KSPIII | 1 |
| Methylophaga thalassica | 2 |
| Methylophaga thiooxydans | 1 |
| Methylophilus methylotrophus W3A1 | 2 |
| Methylosarcina lacus | 1 |
| Methylosinus sporium | 2 |
| Methylosinus trichosporium | 2 |
| Methylosinus trichosporium OB3b | 3 |
| Methylosphaera | 1 |
| Methylosphaera hansonii | 2 |
| Methylosulfonomonas methylovora | 1 |
| Methylosulfonomonas sp. M2 | 1 |
| Methyloversatilis universalis | 2 |
| Methylovorus mays | 2 |
| Methylovorus sp. MP688 | 1 |
| Metschnikowia pulcherrima | 1 |
| Meyerozyma guilliermondii | 2 |
| Microbacterium barkeri | 4 |
| Microbacterium imperiale | 4 |
| Microbacterium lacticum | 5 |
| Microbacterium liquefaciens | 5 |
| Microbacterium oxydans IH-35A | 1 |
| Microbacterium saperdae | 5 |
| Microbacterium sp | 1 |
| Microbacterium testaceum | 5 |
| Microchaete diplosiphon | 1 |
| Micrococcus luteus | 11 |
| Micrococcus luteus B-P 26 | 4 |
| Micrococcus percitreus | 1 |
| Microdochium sorghi | 1 |
| Micromonospora | 1 |
| Micromonospora carbonacea | 2 |
| Micromonospora echinospora | 1 |
| Micromonospora griseorubida | 2 |
| Micromonospora megalomicea | 5 |
| Micromonospora rosaria | 1 |
| Micromonospora sp. ACM2-092 | 2 |
| Micromonospora sp. ML1 | 2 |
| Microsporum canis | 1 |
| Mirabilis jalapa | 1 |
| Momordica charantia | 1 |
| Monascus pilosus | 1 |
| Monascus purpureus | 1 |
| Monascus ruber | 1 |
| Moniezia expansa | 1 |
| Moorea producens | 2 |
| Moorella thermoacetica | 7 |
| Moorella thermoautotrophica | 1 |
| Moraxella | 1 |
| Moraxella sp | 1 |
| Moraxella sp. B | 1 |
| Morchella costata | 1 |
| Morchella vulgaris | 1 |
| Morganella morganii | 3 |
| Moritella marina ATCC 15381 | 1 |
| Mortierella alpina | 6 |
| Mucor circinelloides | 1 |
| Mus musculus | 56 |
| Musa acuminata | 2 |
| Musca domestica | 4 |
| Mycena chlorophos | 1 |
| Mycobacterium | 4 |
| Mycobacterium africanum | 2 |
| Mycobacterium austroafricanum IFP 2012 | 1 |
| Mycobacterium austroafricanum IFP 2015 | 1 |
| Mycobacterium avium | 5 |
| Mycobacterium avium complex (MAC) | 1 |
| Mycobacterium avium paratuberculosis | 3 |
| Mycobacterium bovis | 14 |
| Mycobacterium bovis AF2122/97 | 1 |
| Mycobacterium butyricum | 1 |
| Mycobacterium gastri | 1 |
| Mycobacterium gastri MN19 | 3 |
| Mycobacterium goodii strain 12523 | 1 |
| Mycobacterium gordonae | 1 |
| Mycobacterium intracellulare | 3 |
| Mycobacterium kansasii | 2 |
| Mycobacterium lacticola | 2 |
| Mycobacterium leprae | 6 |
| Mycobacterium marinum | 5 |
| Mycobacterium sp. DSM 3803 | 1 |
| Mycobacterium sp. ELW1 | 1 |
| Mycobacterium sp. G3 | 1 |
| Mycobacterium sp. HL 4-NT-1 | 1 |
| Mycobacterium sp. NRRL B-3683 | 1 |
| Mycobacterium sp. NRRL B-3805 | 1 |
| Mycobacterium sp. Py1 | 1 |
| Mycobacterium tuberculosis | 33 |
| Mycobacterium tuberculosis CDC1551 | 2 |
| Mycobacterium tuberculosis complex | 1 |
| Mycobacterium tuberculosis H37Rv | 46 |
| Mycobacterium vaccae JOB5 | 1 |
| Mycolicibacterium farcinogenes | 3 |
| Mycolicibacterium fortuitum | 3 |
| Mycolicibacterium neoaurum VKM Ac-1815D | 1 |
| Mycolicibacterium phlei | 8 |
| Mycolicibacterium rhodesiae JS60 | 1 |
| Mycolicibacterium smegmatis | 23 |
| Mycolicibacterium smegmatis MC2 155 | 2 |
| Mycolicibacterium vaccae | 3 |
| Mycoplasma genitalium | 1 |
| Mycoplasma hominis | 1 |
| Mycoplasma pneumoniae | 1 |
| Mycoplasma pneumoniae M129 | 17 |
| Mytilus californianus | 1 |
| Mytilus edulis | 2 |
| Mytilus galloprovincialis | 1 |
| Mytilus trossulus | 1 |
| Myxococcus fulvus | 6 |
| Myxococcus xanthus | 4 |
| Myxotrichum chartarum | 1 |
| Myxotrichum stipitatum | 1 |
| Myxozyma melibiosi | 1 |
| Myzus cerasi | 1 |
| Nakazawaea anatomiae | 1 |
| Nakazawaea ernobii | 1 |
| Nakazawaea holstii | 1 |
| Nakazawaea ishiwadae | 1 |
| Nakazawaea peltata | 1 |
| Nakazawaea populi | 1 |
| Nakazawaea wickerhamii | 1 |
| Nannizzia fulva | 1 |
| Nannizzia gypsea | 1 |
| Nannizzia incurvata | 1 |
| Nannizzia nana | 1 |
| Nannizzia persicolor | 1 |
| Nannocystis exedens | 3 |
| Narcissus aff. pseudonarcissus MK-2014 | 1 |
| Narcissus pseudonarcissus | 1 |
| Natranaerobius thermophilus | 1 |
| Natrialba | 1 |
| Natrialba magadii | 1 |
| Natronomonas | 1 |
| Nauphoeta cinerea | 1 |
| Neisseria gonorrhoeae | 1 |
| Neisseria gonorrhoeae FA 1090 | 2 |
| Neisseria gonorrhoeae MS11 | 2 |
| Neisseria meningitidis | 5 |
| Neisseria meningitidis serogroup B | 1 |
| Neisseria meningitidis Z2491 | 2 |
| Neisseriaceae | 2 |
| Neocallimastix sp. LM-2 | 2 |
| Neonectria obtusispora | 1 |
| Neonothopanus gardneri | 1 |
| Neonothopanus nambi | 1 |
| Neosiphonia paniculata | 1 |
| Nepenthes alata | 1 |
| Nepenthes rafflesiana | 1 |
| Neptunia | 1 |
| Neptuniibacter caesariensis | 1 |
| Neptuniibacter sp. CAR-SF | 1 |
| Nerine bowdenii | 1 |
| Nesterenkonia halobia | 1 |
| Neurospora crassa | 14 |
| Neurospora crassa 15069 | 1 |
| Neurospora crassa 33933 | 1 |
| Nicotiana attenuata | 3 |
| Nicotiana glutinosa | 1 |
| Nicotiana plumbaginifolia | 1 |
| Nicotiana rustica | 1 |
| Nicotiana sylvestris | 3 |
| Nicotiana tabacum | 58 |
| Nitratiruptor sp. SB155-2 | 1 |
| Nitrobacter | 1 |
| Nitrobacter alkalicus | 1 |
| Nitrobacter hamburgensis | 1 |
| Nitrobacter vulgaris | 1 |
| Nitrobacter winogradskyi | 1 |
| Nitrococcus | 1 |
| Nitrosococcus oceani | 2 |
| Nitrosomonas | 1 |
| Nitrosomonas cryotolerans | 1 |
| Nitrosomonas europaea | 1 |
| Nitrosomonas eutropha | 1 |
| Nitrosopumilus maritimus | 1 |
| Nitrosopumilus maritimus SCM1 | 1 |
| Nitrosospira briensis | 1 |
| Nitrosospira multiformis | 2 |
| Nitrosospira tenuis | 1 |
| Nitrospina | 1 |
| Nitrospira moscoviensis | 1 |
| Nocardia | 2 |
| Nocardia asteroides | 1 |
| Nocardia brasiliensis | 1 |
| Nocardia farcinica | 1 |
| Nocardia globerula | 1 |
| Nocardia transvalensis | 1 |
| Nocardia uniformis tsuyamanensis | 1 |
| Nocardia vaccinii | 1 |
| Nocardioides simplex FJ2-1A | 1 |
| Nocardioides sp. C190 | 1 |
| Nocardioides sp. CB 22-2 | 1 |
| Nocardioides sp. JS1661 | 1 |
| Nocardioides sp. JS614 | 3 |
| Nocardioides sp. SP12 | 1 |
| Nocardiopsis | 1 |
| Nocardiopsis dassonvillei | 2 |
| Nocardiopsis sp. K-290 | 1 |
| Noctiluca scintillans | 1 |
| Nonlabens ulvanivorans | 1 |
| Nonomuraea longicatena | 1 |
| Nostoc commune | 1 |
| Nostoc punctiforme | 7 |
| Nostoc punctiforme PCC 73102 | 4 |
| Nostoc sp. 36 | 4 |
| Nostoc sp. PCC 7120 | 8 |
| Nothapodytes nimmoniana | 2 |
| Novosphingobium aromaticivorans | 1 |
| Oceanimonas doudoroffii | 2 |
| Ochrobactrum | 1 |
| Ochrobactrum anthropi | 1 |
| Ochrobactrum anthropi ATCC 49188 | 1 |
| Ochrobactrum anthropi GPK 3 | 1 |
| Ochrobactrum rhizosphaerae SJY1 | 1 |
| Ochrobactrum sp. G-1 | 1 |
| Ochromonas danica | 1 |
| Ocimum basilicum | 9 |
| Odoribacter splanchnicus | 3 |
| Oenococcus oeni | 6 |
| Oenothera biennis | 1 |
| Oerskovia turbata | 1 |
| Ogataea angusta | 3 |
| Ogataea methanolica | 4 |
| Ogataea pignaliae | 1 |
| Ogataea salicorniae | 1 |
| Olea europaea | 1 |
| Oleomonas sagaranensis | 1 |
| Oligotropha carboxidovorans | 1 |
| Onchidium | 1 |
| Oncorhynchus mykiss | 2 |
| Onygena corvina | 1 |
| Onygena equina | 1 |
| Ophiorrhiza japonica | 2 |
| Ophiorrhiza pumila | 2 |
| Oryctolagus cuniculus | 9 |
| Oryza | 1 |
| Oryza sativa | 48 |
| Oryza sativa Indica Group | 2 |
| Oryza sativa Japonica Group | 14 |
| Oryza sativa Japonica Group cultivar Nipponbare | 3 |
| Ostreococcus lucimarinus | 1 |
| Ovis aries | 3 |
| Oxalobacter formigenes | 1 |
| Oxybasis rubra | 1 |
| Paecilomyces sp. (in: Eurotiomycetes) | 1 |
| Paenarthrobacter aurescens | 1 |
| Paenarthrobacter aurescens TC1 | 1 |
| Paenarthrobacter ilicis | 1 |
| Paenarthrobacter nicotinovorans | 2 |
| Paenarthrobacter ureafaciens | 2 |
| Paenibacillus alvei | 1 |
| Paenibacillus macerans | 2 |
| Paenibacillus polymyxa | 2 |
| Paenibacillus polymyxa E681 | 1 |
| Paenibacillus polymyxa SC2 | 1 |
| Paenibacillus popilliae | 1 |
| Paenibacillus sp. A11-2 | 1 |
| Paenibacillus sp. JJ-1b | 1 |
| Paenibacillus terrae | 1 |
| Panax ginseng | 6 |
| Panax notoginseng | 2 |
| Pandoraea pnomenusa | 1 |
| Panicum miliaceum | 1 |
| Pantoea agglomerans | 8 |
| Pantoea ananatis | 3 |
| Pantoea cypripedii | 1 |
| Pantoea stewartii | 1 |
| Pantoea stewartii stewartii | 1 |
| Papaver somniferum | 8 |
| Parabacteroides distasonis | 3 |
| Parabacteroides goldsteinii | 1 |
| Parabacteroides sp. CAG:409 | 1 |
| Paraburkholderia phenoliruptrix | 1 |
| Paraburkholderia phymatum | 1 |
| Paraburkholderia sacchari | 1 |
| Paraburkholderia xenovorans LB400 | 4 |
| Paracoccus denitrificans | 16 |
| Paracoccus denitrificans NCIMB 8944 | 1 |
| Paracoccus denitrificans NKNIS | 3 |
| Paracoccus denitrificans PD1222 | 2 |
| Paracoccus laeviglucosivorans | 1 |
| Paracoccus pantotrophus | 4 |
| Paracoccus pantotrophus NKNCYSA | 1 |
| Paracoccus thiophilus | 1 |
| Paracoccus versutus | 6 |
| Paraphyton cookei | 1 |
| Paraprevotella clara | 1 |
| Paraprevotella xylaniphila | 1 |
| Passalora fulva | 1 |
| Passiflora edulis | 1 |
| Pasteurella multocida | 4 |
| Patiria pectinifera | 1 |
| Paul's Scarlet Climber Rose | 1 |
| Pavlova lutheri | 1 |
| Pavlova pinguis | 1 |
| Pavlova sp. CCMP459 | 3 |
| Pecten jacobaeus | 1 |
| Pecten maximus | 1 |
| Pectinatus frisingensis | 1 |
| Pectinotrichum llanense | 1 |
| Pectobacterium atrosepticum SCRI1043 | 1 |
| Pectobacterium carotovorum | 6 |
| Pectobacterium carotovorum carotovorum | 2 |
| Pediococcus parvulus | 1 |
| Pediococcus pentosaceus | 3 |
| Pedobacter heparinus | 4 |
| Pedomicrobium sp. ACM 3067 | 1 |
| Peganum harmala | 1 |
| Pelargonium crispum | 1 |
| Pelobacter acetylenicus | 4 |
| Pelobacter carbinolicus | 2 |
| Pelobacter carbinolicus DSM 2380 | 1 |
| Pelobacter propionicus | 3 |
| Pelobacter venetianus | 1 |
| Pelomonas saccharophila | 3 |
| Pelosinus fermentans DSM 17108 | 1 |
| Penicilliopsis zonata | 1 |
| Penicillium aethiopicum | 5 |
| Penicillium chrysogenum | 7 |
| Penicillium cyclopium | 2 |
| Penicillium digitatum | 3 |
| Penicillium digitatum ATCC 201167 | 1 |
| Penicillium expansum | 1 |
| Penicillium glabrum | 2 |
| Penicillium griseofulvum | 1 |
| Penicillium janthinellum | 1 |
| Penicillium malachiteum | 1 |
| Penicillium olsonii | 1 |
| Penicillium palitans | 1 |
| Penicillium paxilli | 2 |
| Penicillium paxilli ATCC 26601 | 2 |
| Penicillium urticae | 1 |
| Peptoclostridium acidaminophilum | 1 |
| Peptoclostridium litorale | 1 |
| Peptoniphilus asaccharolyticus | 2 |
| Pericallis cruenta | 1 |
| Perilla citriodora | 1 |
| Perilla frutescens | 10 |
| Periplaneta americana | 2 |
| Periplaneta fuliginosa | 1 |
| Persea americana | 2 |
| Persephonella marina | 2 |
| Persicaria tinctoria | 2 |
| Petiveria alliacea | 1 |
| Petroselinum crispum | 9 |
| Petrotoga miotherma | 3 |
| Petrotoga mobilis | 3 |
| Petunia x hybrida | 21 |
| Peziza ostracoderma | 1 |
| Phaeobacter inhibens 2.10 | 1 |
| Phaeodactylum tricornutum | 3 |
| Phaeosphaeria sp. L487 | 1 |
| Phaeospirillum fulvum | 3 |
| Phaeospirillum molischianum | 3 |
| Phaffomyces opuntiae | 1 |
| Phanerochaete chrysosporium | 3 |
| Phaseolus coccineus | 2 |
| Phaseolus lunatus | 3 |
| Phaseolus vulgaris | 11 |
Phialophora |
1 | |
| Phlebodium aureum | 1 |
| Phleum pratense | 1 |
| Phormia regina | 1 |
| Phormidium lapideum | 1 |
| Photinus pyralis | 1 |
| Photobacterium angustum S14 | 1 |
| Photobacterium damselae | 1 |
| Photobacterium halotolerans | 1 |
| Photobacterium leiognathi leiognathi | 2 |
| Photobacterium phosphoreum | 1 |
| Photobacterium profundum SS9 | 1 |
| Photobacterium sp. SKA34 | 1 |
| Photorhabdus laumondii laumondii TTO1 | 1 |
| Photorhabdus luminescens | 1 |
| Phycomyces blakesleeanus | 1 |
| Physaria | 1 |
| Physaria fendleri | 2 |
| Physaria kathryn | 2 |
| Physaria lindheimeri | 2 |
| Physarum polycephalum | 1 |
| Physcomitrella patens | 6 |
| Phytomonas | 1 |
| Phytophthora cactorum | 1 |
| Phytophthora infestans | 1 |
| Picea abies | 10 |
| Picea glauca | 1 |
| Picea sitchensis | 1 |
| Pichia fermentans | 1 |
| Pichia norvegensis | 1 |
| Picrophilus torridus | 1 |
| Pieris rapae | 1 |
| Pigmentiphaga sp. DL-8 | 1 |
| Pimelobacter simplex | 6 |
| Pimelobacter sp. R48 | 1 |
| Pimpinella | 1 |
| Pimpinella anisum | 4 |
| Pinus banksiana | 1 |
| Pinus contorta | 4 |
| Pinus densiflora | 2 |
| Pinus ponderosa | 1 |
| Pinus sabiniana | 1 |
| Pinus strobus | 3 |
| Pinus sylvestris | 7 |
| Pinus taeda | 10 |
| Piper nigrum | 1 |
| Pisum sativum | 53 |
| Planococcus antarcticus | 1 |
| Planococcus citreus | 1 |
| Plasmodium falciparum | 7 |
| Plasmodium falciparum 3D7 | 2 |
| Plasmodium falciparum HB3 | 1 |
| Plasmodium malariae | 1 |
| Plasmodium ovale | 1 |
| Plasmodium vivax | 1 |
| Plectranthus barbatus | 1 |
| Plesiocystis pacifica | 2 |
| Plesiomonas shigelloides | 1 |
| Plesiomonas sp. M6 | 1 |
| Plesiomonas sp. Yoshida 95 | 1 |
| Pleurotus ostreatus | 1 |
| Pleurotus sapidus | 1 |
| Plumbago europaea | 1 |
| Plumbago indica | 1 |
| Podophyllum peltatum | 3 |
| Pogostemon cablin | 4 |
| Polaribacter filamentus | 1 |
| Polaribacter irgensii 23-P | 1 |
| Polygonum cuspidatum | 2 |
| Populus | 1 |
| Populus alba | 1 |
| Populus deltoides | 3 |
| Populus nigra | 2 |
| Populus tremula x Populus alba | 1 |
| Populus tremula x Populus tremuloides | 2 |
| Populus tremuloides | 1 |
| Populus trichocarpa | 3 |
| Populus trichocarpa x Populus deltoides | 1 |
| Porphyrobacter tepidarius | 1 |
| Porphyromonas asaccharolytica | 5 |
| Porphyromonas gingivalis | 3 |
| Porphyromonas levii | 3 |
| Portulaca grandiflora | 3 |
| Portulaca oleracea | 1 |
| Postechiella marina | 1 |
| Prauserella rugosa | 1 |
| Prevotella brevis | 5 |
| Prevotella dentalis | 1 |
| Prevotella denticola | 1 |
| Prevotella intermedia | 2 |
| Prevotella melaninogenica | 5 |
| Prevotella oralis | 8 |
| Prevotella paludivivens | 1 |
| Prevotella ruminicola | 9 |
| Prochlorococcus marinus | 2 |
| Prochlorococcus marinus MIT 9211 | 1 |
| Prochlorococcus marinus MIT 9313 | 2 |
| Prochlorococcus marinus pastoris CCMP1986 | 5 |
| Prochlorococcus phage P-SSM2 | 1 |
| Prochlorococcus phage P-SSM4 | 1 |
| Prochloron didemni P2-Fiji | 1 |
| Promicromonospora citrea | 1 |
| Propionibacterium cyclohexanicum | 1 |
| Propionibacterium freudenreichii | 5 |
| Propionibacterium freudenreichii shermanii | 6 |
| Propionigenium modestum | 1 |
| Proteiniphilum acetatigenes | 1 |
| Proteus mirabilis | 6 |
| Proteus penneri 26 | 1 |
| Proteus vulgaris | 11 |
| Proteus vulgaris OX2 | 1 |
| Protoperidinium depressum | 1 |
| Providencia alcalifaciens | 1 |
| Providencia stuartii | 1 |
| Prunella vulgaris | 1 |
| Prunus dulcis | 1 |
| Prunus mume | 1 |
| Prunus serotina | 1 |
| Pseudaminobacter salicylatoxidans | 2 |
| Pseudanabaena limnetica | 1 |
| Pseudanabaena limnetica Castaic Lake | 1 |
| Pseudarthrobacter oxydans | 1 |
| Pseudarthrobacter polychromogenes | 2 |
| Pseudarthrobacter sulfonivorans | 2 |
| Pseudoalteromonas atlantica T6c | 1 |
| Pseudoalteromonas carrageenovora | 2 |
| Pseudoalteromonas haloplanktis | 1 |
| Pseudoalteromonas haloplanktis TAC125 | 1 |
| Pseudoalteromonas luteoviolacea | 2 |
| Pseudoalteromonas luteoviolacea 2ta16 | 3 |
| Pseudoalteromonas phenolica O-BC30 | 3 |
| Pseudoalteromonas sp. AJ5 | 1 |
| Pseudoalteromonas sp. CL19 | 1 |
| Pseudoalteromonas sp. LL1 | 1 |
| Pseudoalteromonas tetraodonis | 1 |
| Pseudobacteroides cellulosolvens | 2 |
| Pseudohyphozyma bogoriensis | 2 |
| Pseudomonas | 8 |
| Pseudomonas aeruginosa | 77 |
| Pseudomonas aeruginosa O11 | 1 |
| Pseudomonas aeruginosa O12 | 1 |
| Pseudomonas aeruginosa O4 | 1 |
| Pseudomonas aeruginosa O5 | 1 |
| Pseudomonas aeruginosa PA14 | 2 |
| Pseudomonas aeruginosa PAO1 | 19 |
| Pseudomonas aeruginosa TAU-5 | 1 |
| Pseudomonas alcaligenes | 1 |
| Pseudomonas alcaligenes NCIMB 9867 | 3 |
| Pseudomonas amygdali pv. sesami | 1 |
| Pseudomonas cepacia 122 | 1 |
| Pseudomonas chloritidismutans | 1 |
| Pseudomonas chlororaphis | 1 |
| Pseudomonas chlororaphis aureofaciens | 1 |
| Pseudomonas chlororaphis aureofaciens 30-84 | 2 |
| Pseudomonas chlororaphis B23 | 2 |
| Pseudomonas chlororaphis chlororaphis | 5 |
| Pseudomonas citronellolis | 2 |
| Pseudomonas clemancea | 1 |
| Pseudomonas collierea | 1 |
| Pseudomonas cruciviae | 1 |
| Pseudomonas deceptionensis | 1 |
| Pseudomonas denitrificans (nomen rejiciendum) | 8 |
| Pseudomonas entomophila L48 | 1 |
| Pseudomonas fluorescens | 33 |
| Pseudomonas fluorescens 2-79 | 1 |
| Pseudomonas fluorescens 23F | 1 |
| Pseudomonas fluorescens ACB | 1 |
| Pseudomonas fluorescens AN103 | 1 |
| Pseudomonas fluorescens ATCC 23728 | 1 |
| Pseudomonas fluorescens BL915 | 1 |
| Pseudomonas fluorescens DSM 8341 | 1 |
| Pseudomonas fluorescens I-C | 1 |
| Pseudomonas fluorescens KU-7 | 1 |
| Pseudomonas fluorescens NCIMB 10586 | 1 |
| Pseudomonas fluorescens Pf0-1 | 3 |
| Pseudomonas fluorescens SK1 | 1 |
| Pseudomonas fluorescens ST | 1 |
| Pseudomonas fluorescens TN5 | 1 |
| Pseudomonas fragi | 4 |
| Pseudomonas hydrogenovora | 1 |
| Pseudomonas knackmussii | 6 |
| Pseudomonas LD2 | 1 |
| Pseudomonas mendocina | 4 |
| Pseudomonas mendocina (pWWO) or (pTOL) | 2 |
| Pseudomonas mevalonii | 2 |
| Pseudomonas moorei | 1 |
| Pseudomonas nitroreducens | 5 |
| Pseudomonas nitroreducens J5-1 | 1 |
| Pseudomonas oleovorans | 3 |
| Pseudomonas protegens Pf-5 | 5 |
| Pseudomonas pseudoalcaligenes JS45 | 2 |
| Pseudomonas putida | 51 |
| Pseudomonas putida 1290 | 1 |
| Pseudomonas putida 40 | 1 |
| Pseudomonas putida 77 | 2 |
| Pseudomonas putida AC866 | 3 |
| Pseudomonas putida ATCC 17453 | 4 |
| Pseudomonas putida ATCC 17484 | 1 |
| Pseudomonas putida B2 | 1 |
| Pseudomonas putida C1 | 1 |
| Pseudomonas putida CBB5 | 3 |
| Pseudomonas putida DLL-E4 | 1 |
| Pseudomonas putida DS1 | 1 |
| Pseudomonas putida F1 | 4 |
| Pseudomonas putida GB-1 | 3 |
| Pseudomonas putida GJ31 | 1 |
| Pseudomonas putida GPo1 | 1 |
| Pseudomonas putida H262 | 1 |
| Pseudomonas putida HS12 | 2 |
| Pseudomonas putida II-B | 1 |
| Pseudomonas putida J | 1 |
| Pseudomonas putida JD1 | 1 |
| Pseudomonas putida JS444 | 1 |
| Pseudomonas putida KD6 | 1 |
| Pseudomonas putida KL47 | 1 |
| Pseudomonas putida KT2440 | 6 |
| Pseudomonas putida KT2442 | 1 |
| Pseudomonas putida mt-2 | 10 |
| Pseudomonas putida N-9 | 1 |
| Pseudomonas putida NCIB 9869 | 2 |
| Pseudomonas putida NCIMB 9866 | 2 |
| Pseudomonas putida No. 352 | 1 |
| pseudomonas putida NP | 1 |
| Pseudomonas putida O1 | 1 |
| Pseudomonas putida ORC | 2 |
| Pseudomonas putida P35X | 1 |
| Pseudomonas putida PDC | 1 |
| Pseudomonas putida PL-W | 1 |
| Pseudomonas putida PpG7 | 2 |
| Pseudomonas putida S16 | 1 |
| Pseudomonas putida SQ1 | 1 |
| Pseudomonas putida strain PaWl | 1 |
| Pseudomonas putida T | 1 |
| Pseudomonas putida TG2T | 1 |
| Pseudomonas putida TW3 | 4 |
| Pseudomonas putida U | 4 |
| Pseudomonas putida UCC22 | 1 |
| Pseudomonas putida WS | 1 |
| Pseudomonas putida ZWL73 | 1 |
| Pseudomonas reinekei | 6 |
| Pseudomonas rhodesiae | 1 |
| Pseudomonas savastanoi | 1 |
| Pseudomonas savastanoi pv. glycinea | 1 |
| Pseudomonas savastanoi pv. phaseolicola | 2 |
| Pseudomonas sp | 6 |
| Pseudomonas sp GU5 | 1 |
| Pseudomonas sp. 1-7 | 2 |
| Pseudomonas sp. 7B | 1 |
| Pseudomonas sp. A3 | 2 |
| Pseudomonas sp. ADP | 2 |
| Pseudomonas sp. AK-1 | 2 |
| Pseudomonas sp. AP3 | 1 |
| Pseudomonas sp. ATCC 17483 | 1 |
| Pseudomonas sp. B2aba | 1 |
| Pseudomonas sp. CA10 | 2 |
| Pseudomonas sp. CBB1 | 1 |
| Pseudomonas sp. CBS3 | 1 |
| Pseudomonas sp. CF600 | 3 |
| Pseudomonas sp. ENV2030 | 1 |
| Pseudomonas sp. gs1 | 2 |
| Pseudomonas sp. HH69 | 1 |
| Pseudomonas sp. HR199 | 2 |
| Pseudomonas sp. HZN6 | 1 |
| Pseudomonas sp. K-62 | 1 |
| Pseudomonas Sp. K172 | 2 |
| Pseudomonas sp. KB 740 | 2 |
| Pseudomonas sp. KIE171 | 1 |
| Pseudomonas sp. MA-1 | 1 |
| Pseudomonas sp. MG61 | 1 |
| Pseudomonas sp. ML2 | 1 |
| Pseudomonas sp. MS | 1 |
| Pseudomonas sp. NCIB 10590 | 1 |
| Pseudomonas sp. NCIB 8858 | 2 |
| Pseudomonas sp. NCIB9816-4 | 3 |
| Pseudomonas sp. NCIMB 10558 | 1 |
| Pseudomonas sp. NT4 | 3 |
| Pseudomonas sp. NyZ402 | 1 |
| Pseudomonas sp. P.J. 874 | 1 |
| Pseudomonas sp. P51 | 7 |
| Pseudomonas sp. PG | 1 |
| Pseudomonas Sp. PB16 | 1 |
| Pseudomonas sp. PL | 1 |
| Pseudomonas sp. PS14 | 3 |
| Pseudomonas sp. Ps7 | 1 |
| Pseudomonas sp. SG-MS2 | 1 |
| Pseudomonas sp. strain VM15C | 1 |
| Pseudomonas sp. TPU 7192 | 1 |
| Pseudomonas sp. VLB120 | 1 |
| Pseudomonas sp. WBC-3 | 2 |
| Pseudomonas sp. Y2 | 1 |
| Pseudomonas sp. YL | 1 |
| Pseudomonas straminea | 1 |
| Pseudomonas stutzeri | 6 |
| Pseudomonas stutzeri AN10 | 2 |
| Pseudomonas stutzeri ZWLR2-1 | 1 |
| Pseudomonas syringae | 7 |
| Pseudomonas syringae pv. syringae | 1 |
| Pseudomonas syringae pv. syringae B728a | 1 |
| Pseudomonas taiwanensis | 1 |
| Pseudomonas teessidea | 1 |
| Pseudomonas veronii 16-6A | 1 |
| Pseudonocardia autotrophica | 1 |
| Pseudonocardia sp. P1 | 1 |
| Pseudooceanicola batsensis HTCC2597 | 1 |
| Psilocybe cubensis | 1 |
| Psilocybe cyanescens | 1 |
| Psilotum nudum | 1 |
| Psychrobacillus insolitus | 2 |
| Psychrobacter urativorans | 1 |
| Psychroflexus torquis ATCC 700755 | 1 |
| Psychromonas ingrahamii | 1 |
| Psychromonas ingrahamii 37 | 1 |
| Pteris vittata | 1 |
| Puccinia coronata avenae f. sp. avenae | 1 |
| Pucciniastrum boehmeriae | 1 |
| Pueraria montana lobata | 5 |
| Punica granatum | 1 |
| Pyrobaculum | 1 |
| Pyrobaculum aerophilum | 2 |
| Pyrobaculum arsenaticum | 1 |
| Pyrobaculum calidifontis | 3 |
| Pyrobaculum islandicum | 3 |
| Pyrobaculum neutrophilum | 2 |
| Pyrobaculum neutrophilum V24Sta | 1 |
| Pyrococcus abyssi | 5 |
| Pyrococcus furiosus | 15 |
| Pyrococcus furiosus DSM 3638 | 1 |
| Pyrococcus horikoshii | 12 |
| Pyrococcus sp. ST04 | 1 |
| Pyrococcus woesei | 2 |
| Pyrocystis fusiformis | 1 |
| Pyrocystis lunula | 1 |
| Pyrocystis noctiluca | 1 |
| Pyrodictium abyssi | 1 |
| Pyrodictium brockii | 1 |
| Pyrus pyrifolia | 1 |
| Pythium irregulare | 1 |
| Quercus robur | 2 |
| Quercus rubra | 1 |
| Ralstonia eutropha JMP222 | 3 |
| Ralstonia eutropha NH9 | 2 |
| Ralstonia pickettii | 6 |
| Ralstonia pickettii LD1 | 1 |
| Ralstonia solanacearum | 6 |
| Ralstonia sp. EDS1 | 1 |
| Ralstonia sp. JS668 | 2 |
| Ralstonia sp. T6 | 1 |
| Ralstonia sp. U2 | 3 |
| Rana catesbeiana | 1 |
| Raoultella planticola | 1 |
| Raoultella terrigena | 2 |
| Raphanus sativus | 4 |
| Rathayibacter iranicus | 2 |
| Rathayibacter tritici | 2 |
| Rattus | 1 |
| Rattus norvegicus | 88 |
| Rauvolfia serpentina | 2 |
| Rebecca salina | 3 |
| Renibacterium salmoninarum | 1 |
| Renilla muelleri | 1 |
| Renilla reniformis | 1 |
| Rheum palmatum | 2 |
| Rheum tataricum | 1 |
| Rhizobiaceae | 4 |
| Rhizobium etli | 1 |
| Rhizobium leguminosarum | 6 |
| Rhizobium leguminosarum bv. phaseoli | 1 |
| Rhizobium leguminosarum bv. trifolii | 2 |
| Rhizobium leguminosarum bv. viciae | 2 |
| Rhizobium leguminosarum bv. viciae 3841 | 1 |
| Rhizobium phaseoli | 2 |
| Rhizobium sp. MTP-10005 | 1 |
| Rhizobium tropici | 1 |
| Rhizophora apiculata | 1 |
| Rhizophora mangle | 1 |
| Rhizophora stylosa | 3 |
| Rhizophoraceae | 1 |
| Rhodiola rosea | 1 |
| Rhodiola sachalinensis | 1 |
| Rhodobacter capsulatus | 18 |
| Rhodobacter capsulatus SB 1003 | 1 |
| Rhodobacter sphaeroides | 18 |
| Rhodobacter sphaeroides 2.4.1 | 4 |
| Rhodobacter sphaeroides ATCC 17029 | 1 |
Rhodococcus |
1 | |
| Rhodococcus corynebacterioides | 1 |
| Rhodococcus erythropolis | 5 |
| Rhodococcus erythropolis DCL14 | 4 |
| Rhodococcus erythropolis JCM 6824 | 1 |
| Rhodococcus erythropolis MI2 | 1 |
| Rhodococcus erythropolis XP | 1 |
| Rhodococcus fascians | 1 |
| Rhodococcus globerulus | 1 |
| Rhodococcus hoagii | 5 |
| Rhodococcus hoagii 103S | 3 |
| Rhodococcus jostii RHA1 | 7 |
| Rhodococcus N-774 | 1 |
| Rhodococcus opacus | 7 |
| Rhodococcus opacus 1CP | 1 |
| Rhodococcus opacus GM-14 | 1 |
| Rhodococcus opacus HL PM-1 | 1 |
| Rhodococcus opacus SAO101 | 1 |
| Rhodococcus percolatus | 1 |
| Rhodococcus rhodnii | 1 |
| Rhodococcus rhodochrous | 11 |
| Rhodococcus ruber | 3 |
| Rhodococcus sp | 1 |
| Rhodococcus sp. AD45 | 1 |
| Rhodococcus sp. C1 | 1 |
| Rhodococcus sp. IGTS8 | 1 |
| Rhodococcus sp. N-771 | 1 |
| Rhodococcus sp. NCIMB 12038 | 2 |
| Rhodococcus sp. PN1 | 1 |
| Rhodococcus sp. SQ1 | 2 |
| Rhodococcus sp. strain MS11 | 2 |
| Rhodococcus sp. strain SY1 | 1 |
| Rhodococcus sp. TE1 | 1 |
| Rhodococcus sp. TMP1 | 1 |
| Rhodococcus YH3-3 | 3 |
| Rhodomicrobium vannielii | 3 |
| Rhodopirellula baltica | 1 |
| Rhodopseudomonas palustris | 10 |
| Rhodopseudomonas palustris BisB5 | 1 |
| Rhodopseudomonas palustris CGA009 | 5 |
| Rhodopseudomonas palustris DSM 123 | 1 |
| Rhodopseudomonas palustris TIE-1 | 1 |
| Rhodospirillum rubrum | 12 |
| Rhodothermus marinus | 2 |
| Rhodotorula glutinis | 2 |
| Rhodovulum sulfidophilum | 2 |
| Rhus typhina | 2 |
| Rhyparobia maderae | 1 |
| Ribes nigrum | 1 |
| Ricinus communis | 14 |
| Rickettsia prowazekii | 1 |
| Rickettsia prowazekii Madrid E | 1 |
| Robbsia andropogonis | 1 |
| Robinia pseudoacacia | 1 |
| Roccella tinctoria | 1 |
| Rosa | 1 |
| Rosa chinensis | 3 |
| Rosa hybrid cultivar | 9 |
| Rosales | 1 |
| Roseiflexus castenholzii | 1 |
| Roseiflexus sp. RS-1 | 1 |
| Roseovarius nubinhibens ISM | 4 |
| Rubia tinctorum | 2 |
| Rubrivivax gelatinosus | 14 |
| Rubrobacter xylanophilus | 2 |
| Rubus idaeus | 2 |
| Rubus idaeus strigosus | 1 |
| Rudbeckia hirta | 1 |
| Ruegeria atlantica | 1 |
| ruegeria frisia | 1 |
| Ruegeria pomeroyi | 1 |
| Ruegeria pomeroyi DSS-3 | 7 |
| Ruminiclostridium thermocellum | 2 |
| Ruminiclostridium thermocellum ATCC 27405 | 4 |
| Ruminococcus albus | 2 |
| Ruminococcus albus 7 = DSM 20455 | 1 |
| Ruminococcus albus 8 | 1 |
| Ruminococcus albus NE1 | 1 |
| Ruminococcus gnavus ATCC 29149 | 3 |
| Ruminococcus gnavus N53 | 1 |
| Ruminococcus sp. PO1-3 | 1 |
| Ruta graveolens | 3 |
| Saccharomyces cerevisiae | 202 |
| Saccharomyces cerevisiae S288C | 6 |
| Saccharomyces chevalieri | 1 |
| Saccharopolyspora | 1 |
| Saccharopolyspora erythraea | 3 |
| Saccharopolyspora erythraea NRRL 2338 | 5 |
| Saccharopolyspora rectivirgula | 1 |
| Saccharopolyspora spinosa | 3 |
| Saccharum officinarum | 2 |
| Sagittula stellata E-37 | 1 |
| Salinispora tropica | 1 |
| Salinivibrio costicola | 4 |
| Salipiger bermudensis HTCC2601 | 1 |
| Salmonella enterica | 3 |
| Salmonella enterica enterica serovar Adelaide | 1 |
| Salmonella enterica enterica serovar Agona | 2 |
| Salmonella enterica enterica serovar Paratyphi A | 1 |
| Salmonella enterica enterica serovar Paratyphi B | 1 |
| Salmonella enterica enterica serovar Paratyphi C | 1 |
| Salmonella enterica enterica serovar Typhi | 4 |
| Salmonella enterica enterica serovar Typhimurium | 48 |
| Salmonella enterica enterica serovar Typhimurium str. 14028S | 2 |
| Salmonella enterica enterica serovar Typhimurium str. LT2 | 9 |
| Salmonella enterica O54 | 1 |
| Salvia fruticosa | 1 |
| Salvia hispanica | 1 |
| Salvia officinalis | 3 |
| Salvia rosmarinus | 1 |
| Salvia splendens | 2 |
| Salvia stenophylla | 1 |
| Sandaracinus amylolyticus | 1 |
| Sandarakinorhabdus limnophila | 1 |
| Sander vitreus | 1 |
| Sanguinaria canadensis | 2 |
| Santalum album | 2 |
| Santalum austrocaledonicum | 1 |
| Santalum spicatum | 1 |
| Saturnispora diversa | 1 |
| Saturnispora silvae | 1 |
| Sauromatum venosum | 1 |
| Saussurea medusa | 2 |
| Scapharca broughtonii | 1 |
| Sceloporus jarrovii | 1 |
| Scheffersomyces stipitis CBS 6054 | 1 |
| Schistocerca gregaria | 1 |
| Schizochytrium sp. ATCC 20888 | 1 |
| Schizonepeta tenuifolia | 1 |
| Schizophyllum commune | 1 |
| Schizosaccharomyces pombe | 6 |
| Schizosaccharomyces pombe 972h- | 1 |
| Sclerotinia sclerotiorum | 1 |
| Scutellaria baicalensis | 3 |
| Scutellaria viscidula | 1 |
| Scytonema sp | 1 |
| Secale cereale | 9 |
| Selenomonas ruminantium | 2 |
| Senecio | 1 |
| Senecio vernalis | 1 |
| Senecio vulgaris | 1 |
| Septoria lycopersici | 1 |
| Serratia liquefaciens | 1 |
| Serratia marcescens | 12 |
| Serratia marcescens H30 | 1 |
| Serratia plymuthica | 4 |
| Serratia proteamaculans 568 | 1 |
| Serratia sp. DS001 | 1 |
| Sesamum alatum | 1 |
| Sesamum indicum | 3 |
| Sesamum radiatum | 2 |
| Sesbania rostrata | 2 |
| Setaria italica | 1 |
| Setophoma sacchari | 1 |
| Shanorella spirotricha | 1 |
| Shewanella algae | 1 |
| Shewanella amazonensis SB2B | 1 |
| Shewanella denitrificans | 1 |
| Shewanella denitrificans OS217 | 1 |
| Shewanella hanedai | 1 |
| Shewanella oneidensis | 3 |
| Shewanella oneidensis MR-1 | 6 |
| Shewanella pneumatophori | 1 |
| Shewanella putrefaciens | 4 |
| Shewanella putrefaciens 200 | 1 |
| Shewanella sp. ANA-3 | 3 |
| Shewanella sp. GA-22 | 1 |
| Shewanella sp. MR-4 | 2 |
| Shewanella sp. MR-7 | 2 |
| Shigella boydii | 1 |
| Shigella flexneri | 1 |
| Shinella sp. HZN7 | 1 |
| Silene dioica | 3 |
| Silene latifolia | 2 |
| Silene latifolia alba | 1 |
| Simmondsia chinensis | 2 |
| Sinapis alba | 1 |
| Sinningia cardinalis | 2 |
| Sinomonas atrocyanea | 3 |
| Sinopodophyllum hexandrum | 3 |
| Sinorhizobium fredii | 2 |
| Sinorhizobium fredii NGR234 | 3 |
| Sinorhizobium meliloti | 15 |
| Sinorhizobium meliloti 1021 | 8 |
| Sinorhizobium meliloti Rm2011 | 12 |
| Sipunculus nudus | 1 |
| Slackia isoflavoniconvertens | 1 |
| Slackia sp. NATTS | 1 |
| Slafractonia leguminicola | 1 |
| Solanum | 1 |
| Solanum aculeatissimum | 1 |
| Solanum habrochaites | 9 |
| Solanum habrochaites 1731 | 1 |
| Solanum habrochaites 1777 | 1 |
| Solanum habrochaites 2098 | 1 |
| Solanum habrochaites 2861 | 1 |
| Solanum lycopersicum | 68 |
| Solanum melongena | 1 |
| Solanum pennellii | 4 |
| Solanum tuberosum | 46 |
| Solenostemon scutellarioides | 2 |
| Solidago canadensis | 2 |
| Sophora flavescens | 1 |
| Sorbus aucuparia | 2 |
| Sorghum bicolor | 7 |
| Spartina | 1 |
| Sphaerobacter | 1 |
| Sphingobacterium mizutaii | 1 |
| Sphingobium chlorophenolicum | 2 |
| Sphingobium fuliginis | 2 |
| Sphingobium japonicum | 1 |
| Sphingobium japonicum BiD32 | 1 |
| Sphingobium sp. SYK-6 | 1 |
| Sphingomonas astaxanthinifaciens | 1 |
| Sphingomonas elodea | 1 |
| Sphingomonas lacus | 1 |
| Sphingomonas paucimobilis | 1 |
| Sphingomonas sp. A1 | 1 |
| Sphingomonas sp. CB3 | 1 |
| Sphingomonas sp. PH-07 | 1 |
| Sphingomonas sp. SKA58 | 1 |
| Sphingomonas sp. SS3 | 1 |
| Sphingomonas sp. SYK6 | 9 |
| Sphingomonas sp. UG30 | 1 |
| Sphingomonas sp. XLDN2-5 | 1 |
| Sphingomonas wittichii RW1 | 3 |
| Sphingopyxis sp. 113P3 | 1 |
| Sphinx ligustri | 1 |
| Spinacia oleracea | 29 |
| Spirodela polyrhiza | 1 |
| Spiroplasma citri | 1 |
| Spodoptera | 1 |
| Spodoptera littoralis | 3 |
| Sporobolus alterniflorus | 2 |
| Sporolactobacillus inulinus | 2 |
| Sporomusa malonica | 1 |
| Sporomusa ovata | 2 |
| Sporomusa termitida | 1 |
| Sporosarcina globispora | 1 |
| Sporosarcina pasteurii | 3 |
| Sporosarcina ureae | 3 |
| Staphylococcus aureus | 21 |
| Staphylococcus aureus aureus | 1 |
| Staphylococcus aureus aureus ATCC 25923 | 2 |
| Staphylococcus aureus aureus KCTC 1928 | 1 |
| Staphylococcus aureus aureus N315 | 1 |
| Staphylococcus aureus aureus NCTC 8325 | 1 |
| Staphylococcus capitis | 3 |
| Staphylococcus cohnii | 2 |
| Staphylococcus epidermidis | 3 |
| Staphylococcus haemolyticus | 3 |
| Staphylococcus hominis | 2 |
| Staphylococcus lentus | 2 |
| Staphylococcus pseudintermedius | 1 |
| Staphylococcus saprophyticus | 2 |
| Staphylococcus sciuri | 1 |
| Staphylococcus sciuri sciuri | 2 |
| Staphylococcus simulans | 2 |
| Staphylococcus warneri | 3 |
| Staphylococcus xylosus | 2 |
| Staphylothermus marinus | 1 |
| Starkeya novella | 5 |
| Starmera amethionina | 1 |
| Starmera caribaea | 1 |
| Starmerella bombicola | 1 |
| Stellaria media | 2 |
| Stemphylium loti | 1 |
| Stenotrophomonas maltophilia | 7 |
| Stephanurus dentatus | 1 |
| Sterculia foetida | 1 |
| Stetteria hydrogenophila | 1 |
| Stevia rebaudiana | 2 |
| Stigmatella aurantiaca | 3 |
| Stigmatella aurantiaca Sg a15 | 1 |
| Streptoalloteichus tenebrarius | 1 |
| Streptococcus | 1 |
| Streptococcus agalactiae | 7 |
| Streptococcus agalactiae NEM316 | 1 |
| Streptococcus equinus | 1 |
| Streptococcus mutans | 5 |
| Streptococcus oralis | 1 |
| Streptococcus pasteurianus | 2 |
| Streptococcus pneumoniae | 14 |
| Streptococcus pneumoniae 23F | 1 |
| Streptococcus pneumoniae R6 | 1 |
| Streptococcus pyogenes | 2 |
| Streptococcus ratti | 1 |
| Streptococcus salivarius | 2 |
| Streptococcus sanguinis | 2 |
| Streptococcus thermophilus | 3 |
| Streptococcus uberis | 1 |
| Streptomyces | 5 |
| Streptomyces achromogenes rubradiris | 1 |
| Streptomyces actuosus | 1 |
| Streptomyces aizunenesis NRRL-B-11277 | 1 |
| Streptomyces albidoflavus | 1 |
| Streptomyces alboniger | 1 |
| Streptomyces albus | 2 |
| Streptomyces ambofaciens ATCC 23877 | 1 |
| Streptomyces antibioticus | 8 |
| Streptomyces anulatus | 2 |
| Streptomyces arenae | 1 |
| Streptomyces argillaceus | 2 |
| Streptomyces arginensis | 2 |
| Streptomyces avermitilis | 7 |
| Streptomyces avermitilis MA-4680 = NBRC 14893 | 1 |
| Streptomyces bikiniensis | 3 |
| Streptomyces cattleya | 1 |
| Streptomyces chartreusis | 1 |
| Streptomyces chrestomyceticus | 2 |
| Streptomyces cinnabarinus | 1 |
| Streptomyces clavuligerus | 7 |
| Streptomyces coelicolor | 7 |
| Streptomyces coelicolor A3(2) | 11 |
| Streptomyces collinus | 1 |
| Streptomyces davaonensis | 1 |
| Streptomyces echinatus | 1 |
| Streptomyces exfoliatus | 1 |
| Streptomyces felleus | 1 |
| Streptomyces flavochromogenes | 1 |
| Streptomyces fradiae | 8 |
| Streptomyces galbus | 1 |
| Streptomyces galilaeus | 1 |
| Streptomyces gardneri | 1 |
| Streptomyces garyphalus | 1 |
| Streptomyces glaucescens | 1 |
| Streptomyces griseochromogenes | 1 |
| Streptomyces griseovariabilis bandungensis | 2 |
| Streptomyces griseus | 14 |
| Streptomyces griseus griseus NBRC 13350 | 2 |
| Streptomyces hygroscopicus | 5 |
| Streptomyces hygroscopicus 10-22 | 1 |
| Streptomyces hygroscopicus ATCC 21705 | 1 |
| Streptomyces hygroscopicus jinggangensis | 1 |
| Streptomyces hygroscopicus jinggangensis 5008 | 1 |
| Streptomyces hygroscopicus limoneus | 1 |
| Streptomyces kanamyceticus | 1 |
| Streptomyces lasaliensis | 2 |
| Streptomyces lasaliensis NRRL3382R | 1 |
| Streptomyces lavendulae | 2 |
| Streptomyces lavendulae lavendulae | 1 |
| Streptomyces lincolnensis | 2 |
| Streptomyces lividans | 1 |
| Streptomyces lividus | 1 |
| Streptomyces longisporoflavus | 1 |
| Streptomyces luridus | 1 |
| Streptomyces lysosuperificus | 1 |
| Streptomyces maritimus | 2 |
| Streptomyces mediolani | 1 |
| Streptomyces melanosporofaciens | 1 |
| Streptomyces morookaense | 1 |
| Streptomyces mycarofaciens | 1 |
| Streptomyces narbonensis | 1 |
| Streptomyces nodosus asukaensis | 1 |
| Streptomyces noursei ATCC 11455 | 1 |
| Streptomyces odorifer | 1 |
| Streptomyces olivaceus | 2 |
| Streptomyces ornatus | 1 |
| Streptomyces parvulus | 2 |
| Streptomyces peucetius | 2 |
| Streptomyces peucetius caesius | 3 |
| Streptomyces peucetius caesius ATCC 27952 | 1 |
| Streptomyces pilosus | 2 |
| Streptomyces platensis | 1 |
| Streptomyces ravidus | 1 |
| Streptomyces ribosidificus | 1 |
| Streptomyces rimosus | 6 |
| Streptomyces rimosus rimosus ATCC 10970 | 2 |
| Streptomyces rishiriensis | 2 |
| Streptomyces rochei | 1 |
| Streptomyces roseochromogenus oscitans | 3 |
| Streptomyces roseogriseus | 1 |
| Streptomyces rubellomurinus | 1 |
| Streptomyces scabiei 87.22 | 1 |
| Streptomyces somaliensis | 1 |
| Streptomyces sp. C5 | 1 |
| Streptomyces sp. FR-008 | 2 |
| Streptomyces sp. K01-0509 | 1 |
| Streptomyces sp. K30 | 1 |
| Streptomyces sp. KCTC 0041BP | 1 |
| Streptomyces sp. SA-COO | 2 |
| Streptomyces sp. SNA15896 | 1 |
| Streptomyces sp. strain V-1 | 1 |
| Streptomyces sp. TP-A0274 | 1 |
| Streptomyces sp. WA46 | 2 |
| Streptomyces spiralis | 1 |
| Streptomyces triostinicus | 2 |
| Streptomyces venezuelae | 3 |
| Streptomyces venezuelae ATCC 10712 | 2 |
| Streptomyces violaceochromogenes | 1 |
| Streptomyces virginiae | 1 |
| Streptomyces viridochromogenes | 1 |
| Streptomyces viridochromogenes DSM 40736 | 1 |
| Streptomyces wedmorensis | 1 |
| Streptomyces zaomyceticus | 1 |
| Streptosporangium sibiricum | 1 |
| Strobilanthes cusia | 2 |
| Stygiolobus azoricus | 1 |
| Suberites domuncula | 1 |
| Suillus grevillei | 1 |
| Sulfitobacter | 1 |
| Sulfitobacter pontiacus | 1 |
| Sulfitobacter sp. EE-36 | 1 |
| Sulfitobacter sp. NAS-14.1 | 1 |
| Sulfobacillus thermosulfidooxidans | 1 |
| Sulfolobus acidocaldarius | 8 |
| Sulfolobus acidocaldarius DSM 639 | 2 |
| Sulfolobus islandicus | 1 |
| Sulfolobus shibatae | 1 |
| Sulfolobus solfataricus | 23 |
| Sulfolobus solfataricus 98/2 | 1 |
| Sulfolobus solfataricus P2 | 3 |
| Sulfolobus tokodaii | 9 |
| Sulfolobus tokodaii 7 | 2 |
| Sulfuricella denitrificans | 1 |
| Sulfuriferula plumbiphila | 1 |
| Sulfurimonas denitrificans | 1 |
| Sulfurospirillum arcachonense | 1 |
| Sulfurospirillum arsenophilum | 1 |
| Sulfurospirillum barnesii | 1 |
| Sulfurospirillum deleyianum | 1 |
| Sulfurospirillum multivorans | 1 |
| Sus scrofa | 20 |
| Symbiobacterium thermophilum | 1 |
| Synechococcus elongatus | 4 |
| Synechococcus elongatus PCC 6301 | 2 |
| Synechococcus elongatus PCC 7942 | 12 |
| Synechococcus nidulans | 1 |
| Synechococcus sp. PCC 7002 | 12 |
| Synechococcus sp. PCC 7335 | 1 |
| Synechococcus sp. RS9916 | 1 |
| Synechococcus sp. WH 8020 | 1 |
| Synechococcus sp. WH 8102 | 1 |
| Synechocystis | 5 |
| Synechocystis sp. PCC 6803 | 33 |
| Synechocystis sp. PCC 6803 substr. Kazusa | 1 |
| Syngamus trachea | 1 |
| Syntrophococcus sucromutans | 1 |
| Syntrophomonas wolfei | 1 |
| Syntrophus aciditrophicus | 1 |
| Syntrophus buswellii | 1 |
| Syntrophus gentianae | 1 |
| Syzygium aromaticum | 1 |
| Tagetes erecta | 1 |
| Tagetes patula | 1 |
| Talaromyces stipitatus | 1 |
| Tanacetum balsamita | 1 |
| Tanacetum cinerariifolium | 1 |
| Tanacetum parthenium | 2 |
| Tanacetum vulgare | 1 |
| Tannerella forsythia | 1 |
| Taphrina deformans | 1 |
| Taphrina pruni | 1 |
| Taphrina wiesneri | 1 |
| Tapinella panuoides | 1 |
| Taraxacum kok-saghyz | 1 |
| Taxus baccata | 1 |
| Taxus brevifolia | 1 |
| Taxus canadensis | 1 |
| Taxus cuspidata | 3 |
| Taxus wallichiana chinensis | 2 |
| Taxus x media | 1 |
| Tecoma stans | 1 |
| Teleostei | 1 |
| Tellima grandiflora | 1 |
| Telluria mixta | 1 |
| Tephrosia vogelii | 1 |
| Terrabacter sp. DPO360 | 1 |
| Tetradesmus obliquus | 1 |
| Tetragenococcus koreensis | 1 |
| Tetragenococcus muriaticus | 1 |
| Tetrahymena pyriformis | 5 |
| Tetrahymena thermophila | 1 |
| Tetraselmis | 1 |
| Thalassiosira pseudonana | 1 |
| Thalassiosira pseudonana CCMP1335 | 1 |
| Thalictrum bulgaricum | 1 |
| Thalictrum flavum | 3 |
| Thalictrum flavum glaucum | 1 |
| Thalictrum tuberosum | 1 |
| Thauera aromatica | 8 |
| Thauera butanivorans | 2 |
| Theobroma cacao | 2 |
| Thermincola potens JR | 1 |
| Thermithiobacillus tepidarius | 2 |
| Thermoanaerobacter brockii | 2 |
| Thermoanaerobacter pseudethanolicus | 1 |
| Thermoanaerobacterium saccharolyticum | 1 |
| Thermoanaerobacterium thermosaccharolyticum | 2 |
| Thermoascus | 1 |
| Thermoascus aurantiacus | 1 |
| Thermoascus crustaceus | 1 |
| Thermobaculum | 1 |
| Thermobifida fusca | 2 |
| Thermococcus celer | 1 |
| Thermococcus gammatolerans | 1 |
| Thermococcus kodakarensis | 7 |
| Thermococcus kodakarensis KOD1 | 5 |
| Thermococcus litoralis | 3 |
| Thermococcus onnurineus | 1 |
| Thermococcus onnurineus NA1 | 1 |
| Thermococcus sp. B1001 | 1 |
| Thermococcus stetteri | 1 |
| Thermodesulfobacterium commune | 2 |
| Thermodesulforhabdus norvegica | 1 |
| Thermodesulfovibrio yellowstonii | 1 |
| Thermomicrobium | 1 |
| Thermoplasma acidophilum | 7 |
| Thermoplasma volcanium | 1 |
| Thermoproteus | 1 |
| Thermoproteus tenax | 5 |
| Thermosipho melanesiensis | 1 |
| Thermosynechococcus elongatus | 1 |
| Thermosynechococcus elongatus BP-1 | 4 |
| Thermotoga maritima | 19 |
| Thermotoga neapolitana | 2 |
| Thermus aquaticus | 7 |
| Thermus caldophilus | 1 |
| Thermus thermophilus | 10 |
| Thermus thermophilus HB8 | 5 |
| Thioalkalicoccus limnaeus | 1 |
| Thioalkalivibrio paradoxus | 1 |
| Thioalkalivibrio thiocyanodenitrificans | 1 |
| Thioalkalivibrio thiocyanoxidans | 1 |
| Thioalkalivibrio thiocyanoxidans ARh 4 | 2 |
| Thiobacillus denitrificans | 3 |
| Thiobacillus sp. W5 | 3 |
| Thiobacillus thioparus | 10 |
| Thiobacillus thioparus T5 | 1 |
| Thiobacillus thioparus THI 115 | 1 |
| Thiobacillus thioparus TK-m | 2 |
| Thiocapsa marina | 1 |
| Thiocapsa roseopersicina | 2 |
| Thiocapsa roseopersicina M11 | 1 |
| Thiococcus pfennigii | 1 |
| Thioflavicoccus mobilis | 1 |
| Thiohalophilus thiocyanatoxydans | 1 |
| Thiomonas delicata | 1 |
| Thiothrix ramosa | 1 |
| Thraustochytrium sp. ATCC21685 | 1 |
| Thuja plicata | 1 |
| Thunbergia alata | 2 |
| Tilletia caries | 1 |
| Tissierella creatinini | 1 |
| Tissierella creatinophila | 1 |
| Todarodes pacificus | 1 |
| Toxicodendron vernicifluum | 1 |
| Toxoplasma gondii | 1 |
| Toxoplasma gondii ME49 | 1 |
| Toxoplasma gondii RH | 1 |
| Treponema denticola | 3 |
| Treponema pallidum | 2 |
| Treponema phagedenis | 1 |
| Treponema vincentii | 1 |
| Trichinella spiralis | 1 |
| Trichoderma arundinaceum | 2 |
| Trichoderma brevicompactum | 2 |
| Trichoderma harzianum | 1 |
| Trichoderma reesei | 10 |
| Trichoderma reesei QM9414 | 1 |
| Trichoderma viride | 2 |
| Trichodesmium erythraeum | 2 |
| Trichomonas vaginalis | 2 |
| Trichophyton benhamiae | 2 |
| Trichophyton mentagrophytes | 1 |
| Trichophyton simii | 1 |
| Trichormus variabilis | 10 |
| Trichormus variabilis ATCC 29413 | 3 |
| Trichosanthes kirilowii | 1 |
| Trichosporon moniliiforme WU-0401 | 1 |
| Trifolium incarnatum | 1 |
| Trifolium pratense | 5 |
| Trifolium repens | 1 |
| Triglochin maritima | 3 |
| Triticum aestivum | 26 |
| Triticum spelta | 1 |
| Tritrichomonas suis | 1 |
| Trypanosoma brucei | 2 |
| Trypanosoma brucei brucei | 1 |
| Trypanosoma cruzi | 2 |
| Trypanosoma vivax | 1 |
| Tsukamurella paurometabola | 3 |
| Tyria jacobaeae | 1 |
| Ulva curvata | 1 |
| Ulva intestinalis | 1 |
| Ulva lactuca | 1 |
| Uncinocarpus reesii | 1 |
| uncultured bacterium HF130_AEPn_1 | 1 |
| unidentified bacterium BIS-6 | 1 |
| unidentified bacterium DG-C1 | 1 |
| unidentified bacterium MM-P | 1 |
| Urochloa panicoides | 1 |
| Ustilago cynodontis | 2 |
| Ustilago hordei | 1 |
| Ustilago maydis | 6 |
| Ustilago nuda | 1 |
| Ustilago sphaerogena | 2 |
| Ustilago syntherismae | 1 |
| Vaccinia virus | 1 |
| Vaccinium myrtillus | 1 |
| Vaccinium vitis-idaea | 1 |
| Vanilla planifolia | 2 |
| Vanrija humicola | 1 |
| Variovorax paradoxus | 1 |
| Variovorax paradoxus B4 | 1 |
| Variovorax sp. PBS-H4 | 1 |
| Variovorax sp. SRS16 | 1 |
| Variovorax sp. WDL1 | 1 |
| Veillonella parvula | 4 |
| Vernicia fordii | 1 |
| Vernonia galamensis | 1 |
| Vertebrata lanosa | 1 |
| Vibrio albensis | 2 |
| Vibrio alginolyticus | 3 |
| Vibrio alginolyticus NBRC 15630 = ATCC 17749 | 2 |
| Vibrio anguillarum serovar O1 | 1 |
| Vibrio anguillarum serovar O2 | 1 |
| Vibrio cholerae | 11 |
| Vibrio cholerae 569B | 1 |
| Vibrio cholerae non-O1 | 2 |
| Vibrio cholerae O1 | 3 |
| Vibrio cholerae O1 biovar El Tor str. N16961 | 2 |
| Vibrio cholerae O139 | 2 |
| Vibrio cholerae O37 | 1 |
| Vibrio fluvialis JS17 | 1 |
| Vibrio furnissii | 2 |
| Vibrio harveyi | 5 |
| Vibrio parahaemolyticus | 3 |
| Vibrio sp. AX-4 | 1 |
| Vibrio sp. EJY3 | 1 |
| Vibrio sp. JT0107 | 1 |
| Vibrio sp. K-7 | 1 |
| Vibrio sp. XY-214 | 1 |
| Vibrio vulnificus | 2 |
| Vibrio vulnificus CMCP6 | 3 |
| Vibrionaceae | 1 |
| Viburnum furcatum | 1 |
| Vicia faba | 6 |
| Vicia faba Chukyo | 1 |
| Vicia sativa nigra | 1 |
| Vigna aconitifolia | 2 |
| Vigna angularis | 3 |
| Vigna radiata | 2 |
| Vigna radiata radiata | 10 |
| Virgibacillus pantothenticus | 3 |
| Vitis labrusca | 1 |
| Vitis labrusca x Vitis vinifera | 1 |
| Vitis vinifera | 14 |
| Vogesella indigofera | 1 |
| Wachendorfia thyrsiflora | 1 |
| Watasenia scintillans | 1 |
| Wedelia biflora | 1 |
| Weissella confusa | 1 |
| Weissella paramesenteroides | 1 |
| Weissella viridescens | 2 |
| Wickerhamiella galacta | 1 |
| Wickerhamomyces anomalus | 1 |
| Wickerhamomyces mucosus | 1 |
| Wolinella succinogenes | 3 |
| Xanthobacter | 4 |
| Xanthobacter agilis | 1 |
| Xanthobacter autotrophicus | 3 |
| Xanthobacter autotrophicus Py2 | 4 |
| Xanthobacter flavus | 1 |
| Xanthobacter flavus 14p1 | 3 |
| Xanthomonas arboricola | 3 |
| Xanthomonas axonopodis | 2 |
| Xanthomonas campestris | 10 |
| Xanthomonas campestris pv. campestris | 1 |
| Xanthomonas citri | 2 |
| Xanthomonas oryzae | 4 |
| Xanthomonas oryzae pv. oryzae | 1 |
| Xanthomonas sp. 35Y | 2 |
| Xanthomonas translucens | 1 |
| Xanthophyllomyces dendrorhous | 6 |
| Xanthothecium peruvianum | 1 |
| Xenopus laevis | 1 |
| Xenorhabdus nematophila ATCC 19061 | 1 |
| Xylella fastidiosa | 1 |
| Yarrowia lipolytica | 5 |
| Yersinia enterocolitica | 6 |
| Yersinia frederiksenii | 1 |
| Yersinia intermedia | 1 |
| Yersinia kristensenii | 1 |
| Yersinia pestis | 2 |
| Yersinia pseudotuberculosis | 8 |
| Yersinia pseudotuberculosis (type O:2a) | 1 |
| Yersinia ruckeri | 1 |
| Yoonia vestfoldensis SKA53 | 1 |
| Zea luxurians | 1 |
| Zea mays | 50 |
| Zea mays huehuetenangensis | 1 |
| Zea mays mays | 2 |
| Zea mays mexicana | 1 |
| Zea mays parviglumis | 1 |
| Zingiber officinale | 3 |
| Zingiber zerumbet | 2 |
| Zobellia galactanivorans | 4 |
| Zoogloea ramigera | 1 |
| Zygosaccharomyces rouxii | 1 |
| Zymomonas mobilis | 5 |
| [Arthroderma] racemosum | 1 |
| [Bacillus] caldovelox | 1 |
| [Bacillus] selenitireducens | 1 |
| [Brevibacterium] flavum | 1 |
| [Butyribacterium] methylotrophicum | 1 |
| [Candida] berthetii | 1 |
| [Candida] boidinii | 4 |
| [Candida] dendrica | 1 |
| [Candida] ethanolica | 1 |
| [Candida] fennica | 1 |
| [Candida] fructus | 1 |
| [Candida] gotoi | 1 |
| [Candida] incommunis | 1 |
| [Candida] inconspicua | 1 |
| [Candida] lactis-condensi | 1 |
| [Candida] maris | 1 |
| [Candida] maritima | 1 |
| [Candida] methanosorbosa | 1 |
| [Candida] montana | 1 |
| [Candida] nanaspora | 1 |
| [Candida] nemodendra | 1 |
| [Candida] nitratophila | 1 |
| [Candida] norvegica | 1 |
| [Candida] odintsovae | 1 |
| [Candida] ovalis | 1 |
| [Candida] pini | 1 |
| [Candida] pseudolambica | 1 |
| [Candida] quercuum | 1 |
| [Candida] rhagii | 1 |
| [Candida] rugopelliculosa | 1 |
| [Candida] silvicultrix | 1 |
| [Candida] sonorensis | 1 |
| [Candida] stellata | 1 |
| [Candida] stellimalicola | 1 |
| [Candida] succiphila | 1 |
| [Candida] vartiovaarae | 1 |
| [Clostridium] cellulolyticum | 2 |
| [Clostridium] hylemonae DSM 15053 | 1 |
| [Clostridium] josui | 2 |
| [Clostridium] papyrosolvens | 2 |
| [Clostridium] scindens | 1 |
| [Clostridium] scindens ATCC 35704 | 1 |
| [Clostridium] sporosphaeroides | 1 |
| [Clostridium] symbiosum | 1 |
| [Flavobacterium] lutescens | 1 |
| [Haemophilus] ducreyi | 3 |
| [Nectria] haematococca | 2 |
| [Pseudomonas] geniculata | 2 |
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