The pathways in MetaCyc were curated from a wide variety of organisms. Every pathway is labeled with the name of one or more taxonomic groups in which experiments have indicated that the pathway is present. These taxonomic designations include species names, species and strain names, and names of higher taxa such as genus names. When a high-level taxon, such as a genus, is present as a pathway label, the interpretation is that experimental evidence suggests that the pathway is present in all members of that taxon. This table provides the number of pathways associated with each of these taxonomic designations in the current version of MetaCyc.
Note that the fact that a pathway is labeled as occurring in a given taxon does not mean that the pathway does not in fact occur in other taxa. It may be that relevant experiments have not been done, or that MetaCyc curators have not yet curated the relevant literature.
| Organism | Number of pathways |
| Escherichia coli K-12 substr. MG1655 | 363 |
| Arabidopsis thaliana col | 346 |
| Homo sapiens | 320 |
| Saccharomyces cerevisiae | 197 |
| Rattus norvegicus | 86 |
| Pseudomonas aeruginosa | 81 |
| Solanum lycopersicum | 67 |
| Glycine max | 65 |
| Bacillus subtilis | 63 |
| Nicotiana tabacum | 58 |
| Mus musculus | 56 |
| Pisum sativum | 52 |
| Mycobacterium tuberculosis H37Rv | 51 |
| Zea mays | 51 |
| Pseudomonas putida | 51 |
| Salmonella enterica enterica serovar Typhimurium | 48 |
| Solanum tuberosum | 47 |
| Oryza sativa | 47 |
| Bacillus subtilis subtilis 168 | 44 |
| Synechocystis sp. PCC 6803 | 39 |
| Pseudomonas fluorescens | 33 |
| Mycobacterium tuberculosis | 33 |
| Methanocaldococcus jannaschii | 32 |
| Catharanthus roseus | 30 |
| Spinacia oleracea | 29 |
| Klebsiella pneumoniae | 28 |
| Hordeum vulgare | 28 |
| Klebsiella aerogenes | 27 |
| Triticum aestivum | 26 |
| Agrobacterium tumefaciens | 25 |
| Mycolicibacterium smegmatis | 25 |
| Methanosarcina barkeri | 25 |
| Bos taurus | 24 |
| Saccharolobus solfataricus | 24 |
| Petunia x hybrida | 21 |
| Corynebacterium glutamicum | 21 |
| Chlamydomonas reinhardtii | 21 |
| Staphylococcus aureus | 21 |
| Aspergillus niger | 20 |
| Sus scrofa | 20 |
| Methanosarcina thermophila | 20 |
| Methanothermobacter thermautotrophicus | 19 |
| Pseudomonas aeruginosa PAO1 | 19 |
| Thermotoga maritima | 19 |
| Delftia acidovorans | 18 |
| Brassica napus | 18 |
| Rhodobacter capsulatus | 18 |
| Medicago truncatula | 18 |
| Lactococcus lactis | 18 |
| Rhodobacter sphaeroides | 18 |
| Cupriavidus necator | 17 |
| Mycoplasma pneumoniae M129 | 17 |
| Cucumis sativus | 17 |
| Enterococcus faecalis | 16 |
| Geobacillus stearothermophilus | 16 |
| Euglena gracilis | 16 |
| Sinorhizobium meliloti | 16 |
| Haloferax volcanii | 16 |
| Paracoccus denitrificans | 16 |
| Aspergillus nidulans | 16 |
| Cupriavidus sp. PS12 | 15 |
| Clostridium acetobutylicum | 15 |
| Arabidopsis thaliana | 15 |
| Pyrococcus furiosus | 15 |
| Streptomyces griseus | 15 |
| Azotobacter vinelandii | 15 |
| Mammalia | 15 |
| Allochromatium vinosum | 15 |
| Cicer arietinum | 14 |
| Ricinus communis | 14 |
| Rubrivivax gelatinosus | 14 |
| Rhodospirillum rubrum | 14 |
| Mycobacterium tuberculosis variant bovis | 14 |
| Corynebacterium glutamicum ATCC 13032 | 14 |
| Methanosarcina | 14 |
| Acidithiobacillus ferrooxidans | 14 |
| Streptococcus pneumoniae | 14 |
| Neurospora crassa | 14 |
| Vitis vinifera | 14 |
| Oryza sativa Japonica Group | 14 |
| Campylobacter jejuni | 14 |
| Archaeoglobus fulgidus | 13 |
| Medicago sativa | 13 |
| Bradyrhizobium japonicum | 13 |
| Pyrococcus horikoshii | 13 |
| Synechococcus elongatus PCC 7942 | 13 |
| Methanosarcina acetivorans | 13 |
| Chlorobaculum tepidum | 13 |
| Phaseolus vulgaris | 12 |
| Rhodopseudomonas palustris | 12 |
| Bacillus megaterium | 12 |
| Serratia marcescens | 12 |
| Dianthus caryophyllus | 12 |
| Burkholderia cepacia | 12 |
| Drosophila melanogaster | 12 |
| Vibrio cholerae | 12 |
| Bacillus cereus | 12 |
| Sinorhizobium meliloti Rm2011 | 12 |
| Abies grandis | 12 |
| Synechococcus sp. PCC 7002 | 12 |
| Lactobacillus casei | 11 |
| Lupinus luteus | 11 |
| Camellia sinensis | 11 |
| Proteus vulgaris | 11 |
| Deinococcus radiodurans | 11 |
| Streptomyces coelicolor A3(2) | 11 |
| Micrococcus luteus | 11 |
| Rhodococcus rhodochrous | 11 |
| Capsicum annuum | 11 |
| Halobacterium salinarum | 11 |
| Methylorubrum extorquens AM1 | 11 |
| Gallus gallus | 11 |
| Clostridium sporogenes | 11 |
| Cupriavidus pinatubonensis JMP134 | 11 |
| Picea abies | 10 |
| Pinus taeda | 10 |
| Fusarium fujikuroi | 10 |
| Trichoderma reesei | 10 |
| Salmonella enterica enterica serovar Typhimurium str. LT2 | 10 |
| Clostridium acetobutylicum ATCC 824 | 10 |
| Citrobacter freundii | 10 |
| Agrobacterium fabrum C58 | 10 |
| Lotus japonicus | 10 |
| Thermus thermophilus | 10 |
| Trichormus variabilis | 10 |
| Pseudomonas putida mt-2 | 10 |
| Xanthomonas campestris | 10 |
| Clostridium pasteurianum | 10 |
| Aquifex aeolicus | 10 |
| Helicobacter pylori | 10 |
| Methanosarcina TM-1 | 10 |
| Thiobacillus thioparus | 10 |
| Perilla frutescens | 10 |
| Aspergillus fumigatus | 10 |
| Vigna radiata radiata | 10 |
| Bacteroides fragilis | 10 |
| Malus domestica | 10 |
| Linum usitatissimum | 9 |
| Acinetobacter calcoaceticus | 9 |
| Ocimum basilicum | 9 |
| Papaver somniferum | 9 |
| Secale cereale | 9 |
| Saccharomyces cerevisiae S288C | 9 |
| Prevotella ruminicola | 9 |
| Bordetella pertussis | 9 |
| Pseudomonas putida KT2440 | 9 |
| Oryctolagus cuniculus | 9 |
| Petroselinum crispum | 9 |
| Allium cepa | 9 |
| Sphingomonas sp. SYK6 | 9 |
| Desulfovibrio desulfuricans | 9 |
| Clostridium botulinum | 9 |
| Glycyrrhiza echinata | 9 |
| Sulfurisphaera tokodaii | 9 |
| Chlamydia trachomatis | 9 |
| Lactobacillus plantarum | 9 |
| Helicobacter pylori 26695 | 9 |
| Sinorhizobium meliloti 1021 | 9 |
| Daucus carota | 9 |
| Cupriavidus necator H16 | 9 |
| Solanum habrochaites | 9 |
| Bacteroides vulgatus | 9 |
| Bacteroides thetaiotaomicron | 9 |
| Rosa hybrid cultivar | 9 |
| Thermococcus kodakarensis | 9 |
| Methanococcus maripaludis | 8 |
| Plasmodium falciparum | 8 |
| Sulfolobus acidocaldarius | 8 |
| Cavia porcellus | 8 |
| Lactobacillus brevis | 8 |
| Mycolicibacterium phlei | 8 |
| Moorella thermoacetica | 8 |
| Pseudomonas denitrificans (nomen rejiciendum) | 8 |
| Prevotella oralis | 8 |
| Aeromonas hydrophila | 8 |
| Stenotrophomonas maltophilia | 8 |
| Desulfovibrio vulgaris | 8 |
| Comamonas testosteroni | 8 |
| Streptomyces fradiae | 8 |
| Thauera aromatica | 8 |
| Azospirillum brasilense | 8 |
| Fagopyrum esculentum | 8 |
| Arthrobacter globiformis | 8 |
| Aspergillus flavus | 8 |
| Pantoea agglomerans | 8 |
| Alcaligenes faecalis | 8 |
| Glycyrrhiza glabra | 8 |
| Lactuca sativa romaine | 8 |
| Nostoc sp. PCC 7120 | 8 |
| Yersinia pseudotuberculosis | 8 |
| Haemophilus influenzae Rd KW20 | 8 |
| Carthamus tinctorius | 8 |
| Streptomyces antibioticus | 8 |
| Acinetobacter baylyi ADP1 | 8 |
| Clostridium beijerinckii | 7 |
| Nostoc punctiforme | 7 |
| Streptococcus agalactiae | 7 |
| Escherichia coli W | 7 |
| Escherichia coli B | 7 |
| Bacillus anthracis | 7 |
| Haemophilus influenzae | 7 |
| Pseudomonas sp. P51 | 7 |
| Clostridium perfringens | 7 |
| Thermoplasma acidophilum | 7 |
| Thermus aquaticus | 7 |
| Penicillium chrysogenum | 7 |
| Streptomyces clavuligerus | 7 |
| Bacillus licheniformis | 7 |
| Rhodococcus jostii RHA1 | 7 |
| Pseudomonas syringae | 7 |
| Shewanella oneidensis MR-1 | 7 |
| Prochlorococcus marinus pastoris CCMP1986 | 7 |
| Streptomyces coelicolor | 7 |
| Chromobacterium violaceum | 7 |
| Streptomyces avermitilis | 7 |
| Pseudomonas | 7 |
| Rhodococcus opacus | 7 |
| Artemisia annua | 7 |
| Pinus sylvestris | 7 |
| Ruegeria pomeroyi DSS-3 | 7 |
| Avena strigosa | 7 |
| Gluconobacter oxydans | 7 |
| Sorghum bicolor | 7 |
| Pseudomonas sp | 6 |
| Clarkia breweri | 6 |
| Xanthophyllomyces dendrorhous | 6 |
| Aeropyrum pernix | 6 |
| Myxococcus fulvus | 6 |
| Avena sativa | 6 |
| Methanococci | 6 |
| Coptis japonica | 6 |
| Gloeobacter violaceus | 6 |
| Yersinia enterocolitica | 6 |
| Ipomoea batatas | 6 |
| Pseudomonas reinekei | 6 |
| Physcomitrella patens | 6 |
| Pseudomonas stutzeri | 6 |
| Haloarcula marismortui | 6 |
| Aspergillus oryzae | 6 |
| Ginkgo biloba | 6 |
| Vicia faba | 6 |
| Pectobacterium carotovorum | 6 |
| Pseudomonas knackmussii | 6 |
| Mycobacterium avium | 6 |
| Propionibacterium freudenreichii shermanii | 6 |
| Ralstonia solanacearum | 6 |
| Mentha x piperita | 6 |
| Hevea brasiliensis | 6 |
| Bacillus circulans | 6 |
| Desulfotomaculum nigrificans | 6 |
| Proteus mirabilis | 6 |
| Pimelobacter simplex | 6 |
| Corynebacterium diphtheriae | 6 |
| Desulfovibrio gigas | 6 |
| Ralstonia pickettii | 6 |
| Fusarium oxysporum | 6 |
| Ustilago maydis | 6 |
| Rhizobium leguminosarum | 6 |
| Brucella abortus | 6 |
| Streptomyces rimosus | 6 |
| Mycobacterium leprae | 6 |
| Cyberlindnera jadinii | 6 |
| Panax ginseng | 6 |
| Oenococcus oeni | 6 |
| Aeromonas caviae | 6 |
| Acidithiobacillus thiooxidans | 6 |
| Paracoccus versutus | 6 |
| Acidianus ambivalens | 6 |
| Schizosaccharomyces pombe | 6 |
| Chlorobium limicola | 6 |
| Rhodobacter sphaeroides 2.4.1 | 5 |
| Acetobacterium woodii | 5 |
| Salmonella enterica enterica serovar Typhi | 5 |
| Pseudomonas protegens Pf-5 | 5 |
| Thermococcus kodakarensis KOD1 | 5 |
| Streptococcus mutans | 5 |
| Pyrococcus abyssi | 5 |
| Streptomyces | 5 |
| [Ruminococcus] gnavus ATCC 29149 | 5 |
| Methanobacteria | 5 |
| Methanococcus voltae | 5 |
| Propionibacterium freudenreichii | 5 |
| Neisseria meningitidis | 5 |
| Zymomonas mobilis | 5 |
| Cannabis sativa | 5 |
| Methanosarcina mazei | 5 |
| Aromatoleum evansii | 5 |
| Xanthobacter autotrophicus Py2 | 5 |
| Thermus thermophilus HB8 | 5 |
| Leptospira interrogans | 5 |
| Pseudomonas nitroreducens | 5 |
| Methanosarcina mazei Go1 | 5 |
| Rhodopseudomonas palustris CGA009 | 5 |
| Dahlia pinnata | 5 |
| Foeniculum vulgare | 5 |
| Vibrio harveyi | 5 |
| Cucumis melo | 5 |
| Leuconostoc mesenteroides cremoris | 5 |
| Pueraria montana lobata | 5 |
| Lupinus albus | 5 |
| Dickeya chrysanthemi | 5 |
| Klebsiella oxytoca | 5 |
| Trifolium pratense | 5 |
| Kitasatospora aureofaciens | 5 |
| Streptomyces hygroscopicus | 5 |
| Synechocystis | 5 |
| Lactococcus lactis cremoris | 5 |
| Gordonia rubripertincta | 5 |
| Methanothermobacter thermautotrophicus Delta H | 5 |
| Microbacterium saperdae | 5 |
| Microbacterium testaceum | 5 |
| Microbacterium lacticum | 5 |
| Microbacterium liquefaciens | 5 |
| Yarrowia lipolytica | 5 |
| Clostridium kluyveri | 5 |
| Brucella melitensis | 5 |
| Porphyromonas asaccharolytica | 5 |
| Prevotella melaninogenica | 5 |
| Prevotella brevis | 5 |
| Mesorhizobium loti | 5 |
| Bacillus thuringiensis | 5 |
| Halorubrum saccharovorum | 5 |
| Rhodococcus hoagii | 5 |
| Veillonella parvula | 5 |
| Saccharopolyspora erythraea NRRL 2338 | 5 |
| Micromonospora megalomicea | 5 |
| Pseudomonas chlororaphis chlororaphis | 5 |
| Thermoproteus tenax | 5 |
| Citrus x paradisi | 5 |
| Aspergillus parasiticus | 5 |
| Methanothermobacter marburgensis Marburg | 5 |
| Aspergillus terreus | 5 |
| Lysinibacillus sphaericus | 5 |
| Penicillium aethiopicum | 5 |
| Tetrahymena pyriformis | 5 |
| Bacillus pumilus | 5 |
| Mycobacterium marinum | 5 |
| Eggerthella lenta DSM 2243 | 5 |
| Amanita muscaria | 5 |
| Mortierella alpina | 5 |
| Brassica juncea | 5 |
| Delphinium grandiflorum | 5 |
| Methylobacillus flagellatus | 5 |
| Citrus sinensis | 5 |
| Acidiphilium acidophilum | 5 |
| Pseudomonas oleovorans | 5 |
| Synechococcus sp. WH 8102 | 5 |
| Cutibacterium acnes | 5 |
| Rhodococcus erythropolis | 5 |
| Starkeya novella | 5 |
| Lithospermum erythrorhizon | 5 |
| Pedobacter heparinus | 4 |
| Clostridium formicaceticum | 4 |
| Rhodococcus erythropolis DCL14 | 4 |
| Arthrospira platensis | 4 |
| Pinus contorta | 4 |
| Nostoc sp. 36 | 4 |
| Marinomonas mediterranea MMB-1 | 4 |
| Thermosynechococcus elongatus BP-1 | 4 |
| Zobellia galactanivorans | 4 |
| Escherichia coli C | 4 |
| Pseudomonas putida U | 4 |
| Aminobacter aminovorans | 4 |
| Nostoc punctiforme PCC 73102 | 4 |
| Matthiola incana | 4 |
| Dictyostelium discoideum | 4 |
| Paracoccus pantotrophus | 4 |
| Pelobacter propionicus | 4 |
| Methanobrevibacter smithii | 4 |
| Bifidobacterium longum SBT2928 | 4 |
| Bacteroides fragilis NCTC 9343 | 4 |
| Mycobacterium | 4 |
| Eschscholzia californica | 4 |
| Methanothermus | 4 |
| Methanomicrobia | 4 |
| Fusarium graminearum | 4 |
| Myxococcus xanthus | 4 |
| Musca domestica | 4 |
| Manihot esculenta | 4 |
| Lotus corniculatus | 4 |
| Pseudomonas mendocina | 4 |
| Aloe arborescens | 4 |
| Fusobacterium nucleatum | 4 |
| Cutaneotrichosporon cutaneum | 4 |
| Arthrobacter sp | 4 |
| Aliivibrio fischeri | 4 |
| Arabidopsis thaliana ler | 4 |
| Hungateiclostridium thermocellum ATCC 27405 | 4 |
| Clostridium tetanomorphum | 4 |
| Clostridium saccharobutylicum | 4 |
| Pimpinella anisum | 4 |
| Pasteurella multocida | 4 |
| Humulus lupulus | 4 |
| Cupriavidus metallidurans CH34 | 4 |
| Xanthobacter | 4 |
| Coffea arabica | 4 |
| Pelobacter acetylenicus | 4 |
| Streptomyces collinus | 4 |
| Chrysosplenium americanum | 4 |
| Synechococcus elongatus | 4 |
| Blastochloris viridis | 4 |
| Curtobacterium flaccumfaciens | 4 |
| Hyperthermus butylicus | 4 |
| Microbacterium imperiale | 4 |
| Microbacterium barkeri | 4 |
| Agromyces mediolanus | 4 |
| Serratia plymuthica | 4 |
| Bacteroides eggerthii | 4 |
| Bacteroides ovatus | 4 |
| Leifsonia aquatica | 4 |
| Rhizobiaceae | 4 |
| Caenorhabditis elegans | 4 |
| Eisenibacter elegans | 4 |
| Lupinus angustifolius | 4 |
| Salinivibrio costicola | 4 |
| Xanthomonas oryzae | 4 |
| Lactobacillus mali | 4 |
| Pseudomonas putida F1 | 4 |
| Vibrio parahaemolyticus | 4 |
| Datura stramonium | 4 |
| Atropa belladonna | 4 |
| Methylococcus capsulatus | 4 |
| Pseudomonas putida TW3 | 4 |
| Pseudomonas putida ATCC 17453 | 4 |
| Acetobacter aceti | 4 |
| Botrytis cinerea | 4 |
| Citrus maxima | 4 |
| Micrococcus luteus B-P 26 | 4 |
| Haloferax mediterranei | 4 |
| Shewanella putrefaciens | 4 |
| Bombyx mori | 4 |
| Solanum pennellii | 4 |
| Anaerotignum propionicum | 4 |
| Raphanus sativus | 4 |
| Bilophila wadsworthia RZATAU | 4 |
| Amycolatopsis mediterranei | 4 |
| Escherichia coli O157:H7 | 4 |
| Chromohalobacter salexigens DSM 3043 | 4 |
| Candida albicans | 4 |
| Chlorobaculum thiosulfatiphilum | 4 |
| Methylobacterium organophilum | 4 |
| Alcaligenes sp. O-1 | 4 |
| Agapanthus africanus | 4 |
| Brevibacillus brevis S1 | 4 |
| Treponema denticola | 4 |
| Ogataea methanolica | 4 |
| [Candida] boidinii | 4 |
| Hyphomicrobium zavarzinii ZV580 | 4 |
| Paraburkholderia xenovorans LB400 | 4 |
| Pogostemon cablin | 4 |
| Cichorium intybus | 4 |
| Clostridioides difficile | 4 |
| Acetoanaerobium sticklandii | 4 |
| Pseudomonas fragi | 4 |
| Roseovarius nubinhibens ISM | 4 |
| Streptomyces venezuelae | 4 |
| Gossypium hirsutum | 4 |
| Cucurbita maxima | 4 |
| Desulfobacterium autotrophicum | 3 |
| Eubacterium limosum | 3 |
| Pyrobaculum calidifontis | 3 |
| Raoultella terrigena | 3 |
| Pediococcus pentosaceus | 3 |
| Leuconostoc lactis | 3 |
| Pelomonas saccharophila | 3 |
| Pectobacterium atrosepticum SCRI1043 | 3 |
| Methanogenium | 3 |
| Ignicoccus hospitalis | 3 |
| Pseudoalteromonas phenolica O-BC30 | 3 |
| Pseudoalteromonas luteoviolacea 2ta16 | 3 |
| Scutellaria baicalensis | 3 |
| Halococcus saccharolyticus | 3 |
| Methanobacterium bryantii | 3 |
| Nocardioides sp. JS614 | 3 |
| Sesamum indicum | 3 |
| Mentha spicata | 3 |
| Caulobacter vibrioides CB15 | 3 |
| Shewanella oneidensis | 3 |
| Bacteroides vulgatus ATCC 8482 | 3 |
| Saccharolobus solfataricus P2 | 3 |
| Arabidopsis thaliana Cvi | 3 |
| Enterococcus faecium | 3 |
| Vigna aconitifolia | 3 |
| Pseudomonas sp. NCIB9816-4 | 3 |
| Aspergillus rugulosus | 3 |
| Flammulina velutipes | 3 |
| Diaporthe amygdali | 3 |
| Pseudomonas alcaligenes NCIMB 9867 | 3 |
| Porphyromonas gingivalis | 3 |
| Oryza sativa Japonica Group cultivar Nipponbare | 3 |
| Ralstonia eutropha JMP222 | 3 |
| Fusarium solani | 3 |
| Podophyllum peltatum | 3 |
| Ipomoea nil | 3 |
| Fasciola hepatica | 3 |
| Crassostrea gigas | 3 |
| Pinus strobus | 3 |
| Bifidobacterium longum | 3 |
| Ascaris suum | 3 |
| Ascaris lumbricoides | 3 |
| Pantoea ananatis | 3 |
| Pyrobaculum aerophilum | 3 |
| Lycopersicon hirsutum glabratum | 3 |
| Phaeospirillum fulvum | 3 |
| Phaeospirillum molischianum | 3 |
| Escherichia coli | 3 |
| Leuconostoc mesenteroides | 3 |
| [Clostridium] scindens ATCC 35704 | 3 |
| [Clostridium] scindens | 3 |
| [Clostridium] hylemonae DSM 15053 | 3 |
| Clostridium sp. TO-931 | 3 |
| Mycolicibacterium vaccae | 3 |
| Rhodococcus hoagii 103S | 3 |
| Fagopyrum tataricum | 3 |
| Rosa chinensis | 3 |
| Ovis aries | 3 |
| Hypericum androsaemum | 3 |
| Streptomyces maritimus | 3 |
| Vigna angularis | 3 |
| Acremonium chrysogenum | 3 |
| Thalictrum flavum | 3 |
| Berberis wilsoniae | 3 |
| Rhodococcus YH3-3 | 3 |
| Nicotiana sylvestris | 3 |
| Acidovorax citrulli | 3 |
| Salvia officinalis | 3 |
| Methanosarcina acetivorans C2A | 3 |
| Triglochin maritima | 3 |
| Streptomyces spectabilis | 3 |
| Methanohalophilus portucalensis | 3 |
| Halorhodospira halochloris | 3 |
| Brevibacterium helvolum | 3 |
| Cyanidium caldarium | 3 |
| Thermococcus litoralis | 3 |
| Petrotoga miotherma | 3 |
| Methanothermus fervidus | 3 |
| Allium sativum | 3 |
| Metallosphaera sedula | 3 |
| Pseudomonas sp. NT4 | 3 |
| Streptococcus thermophilus | 3 |
| Allium ampeloprasum | 3 |
| [Haemophilus] ducreyi | 3 |
| Aspergillus versicolor | 3 |
| Ruta graveolens | 3 |
| Ralstonia sp. U2 | 3 |
| Trichormus variabilis ATCC 29413 | 3 |
| Burkholderia glumae | 3 |
| Burkholderia thailandensis | 3 |
| Limnanthes douglasii | 3 |
| Shewanella sp. ANA-3 | 3 |
| Gossypium barbadense | 3 |
| Actinidia deliciosa | 3 |
| Linum nodiflorum | 3 |
| Linum flavum | 3 |
| Rebecca salina | 3 |
| Pavlova sp. CCMP459 | 3 |
| Isochrysis galbana | 3 |
| Pseudomonas sp. CF600 | 3 |
| Juglans regia | 3 |
| Zingiber officinale | 3 |
| Curcuma longa | 3 |
| Nicotiana attenuata | 3 |
| Dickeya dadantii 3937 | 3 |
| Pseudomonas putida AC866 | 3 |
| Aerococcus viridans | 3 |
| Portulaca grandiflora | 3 |
| Bradyrhizobium sp. RD5-C2 | 3 |
| Burkholderia sp. RASC | 3 |
| Saccharopolyspora erythraea | 3 |
| Aspergillus aculeatus | 3 |
| Populus deltoides | 3 |
| Xanthomonas arboricola | 3 |
| Burkholderia cenocepacia J2315 | 3 |
| Amycolatopsis lactamdurans | 3 |
| Chlamydia pneumoniae | 3 |
| Lactobacillus helveticus | 3 |
| Citrus unshiu | 3 |
| Pseudomonas sp. PS14 | 3 |
| Aspergillus fischeri | 3 |
| Xanthobacter flavus 14p1 | 3 |
| Salmonella enterica | 3 |
| Saccharopolyspora spinosa | 3 |
| Aromatoleum aromaticum EbN1 | 3 |
| Epichloe festucae | 3 |
| Penicillium digitatum | 3 |
| Streptomyces bikiniensis | 3 |
| Camellia sinensis assamica | 3 |
| Pseudomonas putida CBB5 | 3 |
| Crithidia fasciculata | 3 |
| Chromohalobacter beijerinckii | 3 |
| Porphyromonas levii | 3 |
| Odoribacter splanchnicus | 3 |
| Jonesia denitrificans | 3 |
| Arthrobacter crystallopoietes | 3 |
| Brevibacterium fuscum | 3 |
| Glutamicibacter protophormiae | 3 |
| Clavibacter michiganensis insidiosus | 3 |
| Clavibacter michiganensis | 3 |
| Clavibacter michiganensis nebraskensis | 3 |
| Clavibacter michiganensis sepedonicus | 3 |
| Curtobacterium albidum | 3 |
| Curtobacterium citreum | 3 |
| Curtobacterium luteum | 3 |
| Tsukamurella paurometabola | 3 |
| Mycolicibacterium farcinogenes | 3 |
| Mycolicibacterium fortuitum | 3 |
| Mycobacterium intracellulare | 3 |
| Mycobacterium avium paratuberculosis | 3 |
| Gordonia bronchialis | 3 |
| Gordonia terrae | 3 |
| Dermatophilus congolensis | 3 |
| Acidipropionibacterium acidipropionici | 3 |
| Populus trichocarpa | 3 |
| Streptomyces roseochromogenus oscitans | 3 |
| Actinoalloteichus cyanogriseus | 3 |
| Morganella morganii | 3 |
| Komagataeibacter xylinus | 3 |
| Parabacteroides distasonis | 3 |
| Rhodomicrobium vannielii | 3 |
| Xanthobacter autotrophicus | 3 |
| Sphingomonas wittichii RW1 | 3 |
| Danio rerio | 3 |
| Chromohalobacter salexigens | 3 |
| Limnanthes alba | 3 |
| Sporosarcina ureae | 3 |
| Staphylococcus capitis | 3 |
| Staphylococcus epidermidis | 3 |
| Staphylococcus haemolyticus | 3 |
| Staphylococcus warneri | 3 |
| Bradyrhizobium elkanii | 3 |
| Virgibacillus pantothenticus | 3 |
| Rhodococcus ruber | 3 |
| Corynebacterium flavescens | 3 |
| Nannocystis exedens | 3 |
| Gemmata obscuriglobus | 3 |
| Vibrio alginolyticus | 3 |
| Vibrio vulnificus CMCP6 | 3 |
| Streptomyces lavendulae | 3 |
| Hyoscyamus niger | 3 |
| Mesocricetus auratus | 3 |
| Pyrobaculum islandicum | 3 |
| Wolinella succinogenes | 3 |
| Sporosarcina pasteurii | 3 |
| Streptomyces peucetius caesius | 3 |
| Camellia ptilophylla | 3 |
| Aphanothece halophytica | 3 |
| Spodoptera littoralis | 3 |
| Manduca sexta | 3 |
| Apis mellifera | 3 |
| Sinorhizobium fredii NGR234 | 3 |
| Aggregatibacter actinomycetemcomitans | 3 |
| Arthrobacter citreus | 3 |
| Sinopodophyllum hexandrum | 3 |
| Chlorobium phaeobacteroides DSM 266 | 3 |
| Chlorobium phaeobacteroides BS1 | 3 |
| Chlorobaculum limnaeum | 3 |
| Aedes aegypti | 3 |
| Entamoeba histolytica | 3 |
| Phaeodactylum tricornutum | 3 |
| Brassica oleracea | 3 |
| Vibrio cholerae O1 | 3 |
| Methylosinus trichosporium OB3b | 3 |
| Methylococcus capsulatus Bath | 3 |
| Achromobacter xylosoxidans NCIMB 10751 | 3 |
| Clostridium butyricum | 3 |
| Sinomonas atrocyanea | 3 |
| Clostridium | 3 |
| Ochrobactrum anthropi ATCC 49188 | 3 |
| Burkholderia pseudomallei | 3 |
| Agrobacterium radiobacter K84 | 3 |
| Desulfobulbus propionicus | 3 |
| Methylocystis pyriformis | 3 |
| Methylocystis parvus | 3 |
| Methylocystis minimus | 3 |
| Methylocystis echinoides | 3 |
| Methylobacter whittenburyi | 3 |
| Stigmatella aurantiaca | 3 |
| Rhizophora stylosa | 3 |
| Kandelia candel | 3 |
| Silene dioica | 3 |
| Mycobacterium gastri MN19 | 3 |
| Giardia intestinalis | 3 |
| Pseudomonas putida GB-1 | 3 |
| Ogataea angusta | 3 |
| Komagataella pastoris | 3 |
| Ogataea minuta | 3 |
| Crocus sativus | 3 |
| Campylobacter jejuni jejuni NCTC 11168 = ATCC 700819 | 3 |
| Thiobacillus sp. W5 | 3 |
| Halobacterium salinarum NRC-1 | 3 |
| Limonium latifolium | 3 |
| Comamonas sp. JS765 | 3 |
| Aves | 3 |
| Paracoccus denitrificans NKNIS | 3 |
| Comamonas testosteroni T-2 | 3 |
| Petrotoga mobilis | 3 |
| Caldanaerobacter subterraneus tengcongensis | 3 |
| Crocosphaera subtropica ATCC 51142 | 3 |
| Thiobacillus denitrificans | 3 |
| Bacillus methanolicus | 3 |
| Actinidia chinensis | 3 |
| Phanerochaete chrysosporium | 3 |
| Hypericum perforatum | 3 |
| Hyphomicrobium sulfonivorans | 3 |
| Phaseolus lunatus | 3 |
| Pseudomonas fluorescens Pf0-1 | 3 |
| Capra hircus | 3 |
| Prochlorococcus marinus marinus CCMP1375 | 3 |
| Legionella pneumophila | 3 |
| Campylobacter coli | 3 |
| Gossypium arboreum | 3 |
| Burkholderia sp. WS | 2 |
| Weissella viridescens | 2 |
| Trichoderma brevicompactum | 2 |
| Trichoderma arundinaceum | 2 |
| Penicillium glabrum | 2 |
| Bacillus subtilis spizizenii W23 | 2 |
| Sorbus aucuparia | 2 |
| Salmonella enterica enterica serovar Agona | 2 |
| Sinningia cardinalis | 2 |
| Amorpha fruticosa | 2 |
| Marinomonas sp. MED121 | 2 |
| Clitoria ternatea | 2 |
| Staphylothermus marinus | 2 |
| Alcaligenes faecalis M3A | 2 |
| Linum perenne | 2 |
| Aspergillus stellatus | 2 |
| Achromobacter ruhlandii | 2 |
| Sporomusa ovata | 2 |
| Streptomyces sp. XZQH13 | 2 |
| Streptomyces flaveolus | 2 |
| Sesamum radiatum | 2 |
| Acidovorax facilis | 2 |
| Streptococcus pasteurianus | 2 |
| Rhizobium leguminosarum bv. viciae | 2 |
| Pyrobaculum neutrophilum | 2 |
| Populus nigra | 2 |
| Saussurea medusa | 2 |
| Rauvolfia serpentina | 2 |
| Simmondsia chinensis | 2 |
| Roseiflexus castenholzii | 2 |
| Fusarium sporotrichioides | 2 |
| Pyrococcus woesei | 2 |
| Strobilanthes cusia | 2 |
| Persicaria tinctoria | 2 |
| Anemone leveillei | 2 |
| Zingiber zerumbet | 2 |
| Paenibacillus polymyxa | 2 |
| Paenibacillus macerans | 2 |
| Blautia producta | 2 |
| Methanothrix thermoacetophila | 2 |
| Xanthomonas sp. 35Y | 2 |
| Yersinia pestis | 2 |
| Beta vulgaris vulgaris | 2 |
| Santalum album | 2 |
| Burkholderia gladioli | 2 |
| Rhizobium leguminosarum bv. trifolii | 2 |
| Chloroflexus aurantiacus J-10-fl | 2 |
| Streptococcus sanguinis | 2 |
| Lactococcus lactis lactis | 2 |
| Erwinia amylovora | 2 |
| Fragaria x ananassa | 2 |
| Lactococcus lactis lactis bv. diacetylactis | 2 |
| Methanoculleus | 2 |
| Lactobacillus reuteri | 2 |
| Lactobacillus fermentum | 2 |
| Aspergillus niger ATCC 1015 | 2 |
| Paraburkholderia graminis C4D1M | 2 |
| Pectobacterium carotovorum carotovorum WPP14 | 2 |
| Sulfolobus acidocaldarius DSM 639 | 2 |
| Stellaria media | 2 |
| Paenarthrobacter nicotinovorans | 2 |
| Gerbera hybrid cultivar | 2 |
| Chlorobaculum tepidum TLS | 2 |
| Castellaniella defragrans | 2 |
| Pseudomonas citronellolis | 2 |
| Methanosarcina barkeri Fusaro | 2 |
| Clostridium botulinum A str. ATCC 19397 | 2 |
| Coffea canephora | 2 |
| Methanococcus aeolicus | 2 |
| Leptospira interrogans serovar Lai str. 56601 | 2 |
| Leptospira interrogans serovar Bataviae | 2 |
| Campylobacter jejuni jejuni 81116 | 2 |
| Thioalkalivibrio thiocyanoxidans ARh 4 | 2 |
| Hormoscilla spongeliae SP12 | 2 |
| Staphylococcus aureus aureus ATCC 25923 | 2 |
| Pseudomonas sp. ADP | 2 |
| Oryza sativa Indica Group | 2 |
| Escherichia coli K-12 | 2 |
| Vanilla planifolia | 2 |
| Methanobrevibacter arboriphilus | 2 |
| Trichodesmium erythraeum | 2 |
| Prochlorococcus marinus | 2 |
| Trypanosoma brucei | 2 |
| Trichomonas vaginalis | 2 |
| Neocallimastix sp. LM-2 | 2 |
| Mycolicibacterium smegmatis MC2 155 | 2 |
| Mycobacterium lacticola | 2 |
| Methanospirillum hungatei | 2 |
| Silene latifolia | 2 |
| Clostridium cylindrosporum | 2 |
| Gottschalkia acidurici | 2 |
| Galleria mellonella | 2 |
| Salmonella enterica enterica serovar Typhimurium str. 14028S | 2 |
| Antirrhinum majus | 2 |
| Astragalus bisulcatus | 2 |
| Pseudomonas sp. KB 740 | 2 |
| Pseudomonas Sp. K172 | 2 |
| Cyclotella meneghiniana | 2 |
| Rhodococcus sp. NCIMB 12038 | 2 |
| Lachancea kluyveri | 2 |
| Brevibacillus agri | 2 |
| Vibrio furnissii | 2 |
| Vibrio cholerae O1 biovar El Tor str. N16961 | 2 |
| Vibrio cholerae non-O1 | 2 |
| Arabidopsis | 2 |
| Cryptosporidium parvum | 2 |
| Pseudoalteromonas carrageenovora | 2 |
| Pseudomonas sp. C5pp | 2 |
| Achromobacter denitrificans | 2 |
| Pseudomonas chlororaphis B23 | 2 |
| Bordetella sp. 10d | 2 |
| Sphingobium fuliginis | 2 |
| Ideonella sakaiensis | 2 |
| Acinetobacter baumannii | 2 |
| Pseudomonas sp. gs1 | 2 |
| Pseudomonas sp. CA10 | 2 |
| Cupriavidus nantongensis | 2 |
| Pseudomonas putida ORC | 2 |
| Pseudomonas putida NCIB 9869 | 2 |
| Ustilago sphaerogena | 2 |
| Ralstonia sp. JS668 | 2 |
| Burkholderia sp. JS667 | 2 |
| Shewanella sp. MR-7 | 2 |
| Shewanella sp. MR-4 | 2 |
| Streptomyces sp. SA-COO | 2 |
| Methylovorus mays | 2 |
| Methyloversatilis universalis | 2 |
| Methylocella silvestris | 2 |
| Halorhodospira halophila | 2 |
| Adonis aestivalis palaestina | 2 |
| Cupriavidus basilensis | 2 |
| Synechococcus elongatus PCC 6301 | 2 |
| Prochlorococcus marinus MIT 9313 | 2 |
| Gloeobacter violaceus PCC 7421 | 2 |
| Cyanothece sp. PCC 7425 | 2 |
| Thermoanaerobacter brockii | 2 |
| Phaseolus coccineus | 2 |
| Escherichia coli CFT073 | 2 |
| Desmodium uncinatum | 2 |
| Mytilus edulis | 2 |
| Arenicola marina | 2 |
| Bifidobacterium bifidum | 2 |
| Bifidobacterium animalis lactis | 2 |
| Bifidobacterium adolescentis | 2 |
| Pseudomonas putida 77 | 2 |
| Brevundimonas sp. SD212 | 2 |
| Candidatus Nitrososphaera gargensis Ga9.2 | 2 |
| Mesembryanthemum crystallinum | 2 |
| Ruminiclostridium papyrosolvens | 2 |
| Ruminiclostridium josui | 2 |
| Ruminiclostridium cellulolyticum | 2 |
| Ruminococcus albus | 2 |
| Hungateiclostridium thermocellum | 2 |
| Pseudobacteroides cellulosolvens | 2 |
| Clostridium cellulovorans | 2 |
| Hungateiclostridium cellulolyticum | 2 |
| Treponema pallidum | 2 |
| Borreliella burgdorferi | 2 |
| Megasphaera elsdenii | 2 |
| Edwardsiella tarda | 2 |
| Arabidopsis lyrata | 2 |
| Enterococcus casseliflavus | 2 |
| Bacillus lentus | 2 |
| Aspergillus awamori | 2 |
| Hydrogenobacter thermophilus | 2 |
| Helianthus tuberosus | 2 |
| Streptococcus pyogenes | 2 |
| Croton stellatopilosus | 2 |
| Streptomyces pilosus | 2 |
| Acetobacterium carbinolicum | 2 |
| Polygonum cuspidatum | 2 |
| Corydalis vaginans | 2 |
| Sanguinaria canadensis | 2 |
| Methanosphaera stadtmanae | 2 |
| Clostridium perfringens 13 | 2 |
| Rhodococcus sp. SQ1 | 2 |
| Methylomicrobium alcaliphilum 20Z | 2 |
| Comamonas testosteroni TA441 | 2 |
| Nocardia | 2 |
| Methanopyri | 2 |
| Pseudohyphozyma bogoriensis | 2 |
| Halobacteria | 2 |
| Methylorubrum extorquens | 2 |
| Ectocarpus siliculosus | 2 |
| Methanospirillum | 2 |
| Gottschalkia purinilytica | 2 |
| Listeria monocytogenes | 2 |
| Salinispora arenicola | 2 |
| Lens culinaris | 2 |
| Enhygromyxa salina | 2 |
| Plesiocystis pacifica | 2 |
| Stevia rebaudiana | 2 |
| Argemone mexicana | 2 |
| Galium mollugo | 2 |
| Digitalis purpurea | 2 |
| Digitalis lanata | 2 |
| Brassica oleracea botrytis | 2 |
| Thermotoga neapolitana | 2 |
| Flaveria bidentis | 2 |
| Herbaspirillum huttiense strain NRRL B-12228 | 2 |
| Aspergillus sp. MF297-2 | 2 |
| Plasmodium falciparum 3D7 | 2 |
| Pseudoalteromonas luteoviolacea | 2 |
| Corynebacterium sp | 2 |
| Hypericum calycinum | 2 |
| Fusarium verticillioides | 2 |
| Eustoma exaltatum russellianum | 2 |
| Cistus creticus | 2 |
| Aureobasidium pullulans | 2 |
| Berberis stolonifera | 2 |
| Archaeoglobus fulgidus 7324 | 2 |
| Plectranthus scutellarioides | 2 |
| Anchusa officinalis | 2 |
| Coptis chinensis | 2 |
| Rheum palmatum | 2 |
| Taxus cuspidata | 2 |
| Botryococcus braunii | 2 |
| Beauveria bassiana | 2 |
| Halomonas elongata | 2 |
| Pinus densiflora | 2 |
| Persephonella marina | 2 |
| Penicillium expansum | 2 |
| Xanthomonas axonopodis | 2 |
| Cytophaga hutchinsonii | 2 |
| Desulfitobacterium hafniense Y51 | 2 |
| Impatiens balsamina | 2 |
| Musa acuminata | 2 |
| Glebionis segetum | 2 |
| Streptomyces triostinicus | 2 |
| Streptomyces lasaliensis | 2 |
| Streptomyces griseovariabilis bandungensis | 2 |
| Oceanimonas doudoroffii | 2 |
| Penicillium cyclopium | 2 |
| Allium victorialis | 2 |
| Allium ochotense | 2 |
| Allium chinense | 2 |
| Allium ascalonicum | 2 |
| Allium altyncolicum | 2 |
| Allium altaicum | 2 |
| Allium aflatunense | 2 |
| Melilotus albus | 2 |
| [Nectria] haematococca | 2 |
| Methanothermobacter marburgensis | 2 |
| Rubrobacter xylanophilus | 2 |
| Dehalococcoides mccartyi | 2 |
| Rhodothermus marinus | 2 |
| Leptospira borgpetersenii | 2 |
| Chlamydia muridarum | 2 |
| Chlamydia felis | 2 |
| Chlamydia caviae | 2 |
| Chlamydia abortus | 2 |
| Sporobolus alterniflorus | 2 |
| Daphne odora | 2 |
| Rubus idaeus | 2 |
| Emiliania huxleyi | 2 |
| Felis catus | 2 |
| Pseudomonas chlororaphis aureofaciens 30-84 | 2 |
| Pseudomonas mevalonii | 2 |
| Capsicum chinense | 2 |
| Aphanizomenon flos-aquae | 2 |
| Sphingobium chlorophenolicum | 2 |
| Pseudomonas sp. WBC-3 | 2 |
| Pseudomonas sp. A3 | 2 |
| Pseudomonas sp. 1-7 | 2 |
| Streptomyces sp. WA46 | 2 |
| Pseudomonas stutzeri AN10 | 2 |
| Pseudomonas putida PpG7 | 2 |
| Dechloromonas aromatica | 2 |
| Streptomyces arginensis | 2 |
| Fragaria | 2 |
| Desulfovibrio alaskensis G20 | 2 |
| Desulfitobacterium hafniense | 2 |
| Persea americana | 2 |
| Pectobacterium carotovorum carotovorum | 2 |
| Thunbergia alata | 2 |
| Peptoniphilus asaccharolyticus | 2 |
| Physaria kathryn | 2 |
| Physaria lindheimeri | 2 |
| Physaria fendleri | 2 |
| Calendula officinalis | 2 |
| Thermodesulfobacterium commune | 2 |
| Desulfovibrio sulfodismutans | 2 |
| Desulfovibrio multispirans | 2 |
| Erwinia chrysanthemi EC16 | 2 |
| Cryptomeria japonica | 2 |
| Asparagus officinalis | 2 |
| Clostridium tetani | 2 |
| Clostridium cochlearium | 2 |
| Citrobacter amalonaticus | 2 |
| Coreopsis grandiflora | 2 |
| Hapsidospora irregularis | 2 |
| Celosia cristata | 2 |
| Beta vulgaris | 2 |
| Agrobacterium sp. DSM 8888 | 2 |
| Pseudomonas sp. AK-1 | 2 |
| Asclepias syriaca | 2 |
| Rhodotorula glutinis | 2 |
| Lepidium sativum | 2 |
| Ralstonia eutropha NH9 | 2 |
| Piper methysticum | 2 |
| Brassica rapa | 2 |
| Streptomyces venezuelae ATCC 10712 | 2 |
| Bruguiera gymnorhiza | 2 |
| Aspergillus japonicus | 2 |
| Streptomyces chrestomyceticus | 2 |
| Citrus japonica | 2 |
| Thermobifida fusca | 2 |
| Streptomyces parvulus | 2 |
| Acinetobacter | 2 |
| Betula platyphylla japonica | 2 |
| Trichophyton benhamiae | 2 |
| Sesbania rostrata | 2 |
| Rhodococcus sp. strain MS11 | 2 |
| Streptomyces argillaceus | 2 |
| Trypanosoma cruzi | 2 |
| Pseudomonas savastanoi pv. phaseolicola | 2 |
| Micromonospora carbonacea | 2 |
| Equisetum arvense | 2 |
| Listeria innocua | 2 |
| Staphylococcus xylosus | 2 |
| Neisseriaceae | 2 |
| Thauera butanivorans | 2 |
| Brevundimonas vesicularis | 2 |
| Streptomyces rimosus rimosus ATCC 10970 | 2 |
| Claviceps purpurea | 2 |
| Photobacterium leiognathi leiognathi | 2 |
| Lactobacillus buchneri | 2 |
| Micromonospora griseorubida | 2 |
| Trichoderma viride | 2 |
| Astragalus mongholicus | 2 |
| Prevotella intermedia | 2 |
| Nitrosopumilus maritimus | 2 |
| Mastigocladus laminosus | 2 |
| Desmonostoc muscorum | 2 |
| Halomonas halmophila | 2 |
| Acetobacter pasteurianus | 2 |
| [Pseudomonas] geniculata | 2 |
| Acinetobacter calcoaceticus anitratus | 2 |
| Halomonas halodenitrificans | 2 |
| Pseudarthrobacter polychromogenes | 2 |
| Cellulomonas biazotea | 2 |
| Mycobacterium kansasii | 2 |
| Actinopolyspora halophila | 2 |
| Streptomyces albus | 2 |
| Streptomyces rishiriensis | 2 |
| Marinomonas sp. MWYL1 | 2 |
| Burkholderia lata | 2 |
| Klebsiella michiganensis M5al | 2 |
| Aspergillus terricola | 2 |
| Cyberlindnera saturnus | 2 |
| Candida tropicalis | 2 |
| Streptomyces anulatus | 2 |
| Gluconobacter albidus | 2 |
| Gluconobacter cerinus | 2 |
| Rathayibacter iranicus | 2 |
| Rathayibacter tritici | 2 |
| Actinomyces bovis | 2 |
| Nocardiopsis dassonvillei | 2 |
| Streptomyces peucetius | 2 |
| Halomonas elongata DSM 2581 | 2 |
| Streptomyces olivaceus | 2 |
| Penicillium paxilli ATCC 26601 | 2 |
| Penicillium paxilli | 2 |
| Rhizobium phaseoli | 2 |
| Periplaneta americana | 2 |
| Bacillus alcalophilus | 2 |
| Domibacillus aminovorans | 2 |
| Bacillus amyloliquefaciens | 2 |
| Bacillus badius | 2 |
| Bacillus coagulans | 2 |
| Bacillus firmus | 2 |
| Psychrobacillus insolitus | 2 |
| Bacillus psychrosaccharolyticus | 2 |
| Bacillus racemilacticus | 2 |
| Sporolactobacillus inulinus | 2 |
| Brochothrix thermosphacta | 2 |
| Listeria grayi | 2 |
| Staphylococcus cohnii | 2 |
| Staphylococcus hominis | 2 |
| Staphylococcus saprophyticus | 2 |
| Staphylococcus simulans | 2 |
| Exiguobacterium acetylicum | 2 |
| Bacillus halotolerans | 2 |
| Saccharum officinarum | 2 |
| Halorubrum trapanicum | 2 |
| Xanthomonas citri | 2 |
| Halococcus morrhuae | 2 |
| Glutamicibacter nicotianae | 2 |
| Paenarthrobacter ureafaciens | 2 |
| Brevibacterium linens | 2 |
| Methylosphaera hansonii | 2 |
| Staphylococcus sciuri sciuri | 2 |
| Staphylococcus lentus | 2 |
| Haemophilus parainfluenzae | 2 |
| Capnocytophaga sputigena | 2 |
| Capnocytophaga ochracea | 2 |
| Capnocytophaga gingivalis | 2 |
| Hyoscyamus albus | 2 |
| Selenomonas ruminantium | 2 |
| Zea mays mays | 2 |
| Archaea | 2 |
| Vigna radiata | 2 |
| Vibrio vulnificus | 2 |
| Vibrio alginolyticus NBRC 15630 = ATCC 17749 | 2 |
| Nitrosospira multiformis | 2 |
| Nitrosococcus oceani | 2 |
| Aliivibrio salmonicida LFI1238 | 2 |
| Aromatoleum toluolicum | 2 |
| Meyerozyma guilliermondii | 2 |
| Apium graveolens | 2 |
| Pseudomonas putida NCIMB 9866 | 2 |
| Pseudomonas mendocina (pWWO) or (pTOL) | 2 |
| Sulfurisphaera tokodaii 7 | 2 |
| Enterobacter cloacae | 2 |
| Burkholderia pyrrocinia | 2 |
| Azospirillum lipoferum | 2 |
| Aquifex aeolicus VF5 | 2 |
| Aquifex pyrophilus | 2 |
| Desulfuromonas acetoxidans | 2 |
| Pelobacter carbinolicus | 2 |
| Fusarium heterosporum | 2 |
| Pseudomonas sp. HR199 | 2 |
| Oncorhynchus mykiss | 2 |
| Bacteroides thetaiotaomicron VPI-5482 | 2 |
| Ophiorrhiza pumila | 2 |
| Ophiorrhiza japonica | 2 |
| Nothapodytes nimmoniana | 2 |
| Camptotheca acuminata | 2 |
| Camellia irrawadiensis | 2 |
| Geminocystis herdmanii PCC 6308 | 2 |
| Citrus aurantium | 2 |
| Canavalia lineata | 2 |
| Canavalia ensiformis | 2 |
| Streptomyces griseus griseus NBRC 13350 | 2 |
| Aneurinibacillus thermoaerophilus L420-91 | 2 |
| Gentiana straminea | 2 |
| Ustilago cynodontis | 2 |
| Acer pseudoplatanus | 2 |
| Candida maltosa | 2 |
| Sinorhizobium fredii | 2 |
| Panax notoginseng | 2 |
| Burkholderia plantarii | 2 |
| Chloroflexus aurantiacus | 2 |
| Anthriscus sylvestris | 2 |
| Moorea producens | 2 |
| Leucaena leucocephala | 2 |
| Acinetobacter sp. NCIMB9871 | 2 |
| Streptomyces sp. FR-008 | 2 |
| Pseudomonas aeruginosa PA14 | 2 |
| Desulfonispora thiosulfatigenes GKNTAU | 2 |
| Castellaniella denitrificans | 2 |
| Alicycliphilus denitrificans | 2 |
| Mycobacterium tuberculosis variant africanum | 2 |
| Kocuria rosea | 2 |
| Mycobacterium tuberculosis CDC1551 | 2 |
| Klebsiella oxytoca TauN1 | 2 |
| Candidatus Methylomirabilis oxyfera | 2 |
| Quercus robur | 2 |
| Rhus typhina | 2 |
| Methylophilus methylotrophus W3A1 | 2 |
| Methylophaga thalassica | 2 |
| Methylomonas sp. J | 2 |
| Streptococcus salivarius | 2 |
| Chlorella sp. (Roon 68) | 2 |
| Nitrosopumilus maritimus SCM1 | 2 |
| Candidatus Pelagibacter ubique | 2 |
| Desulfocapsa sulfexigens | 2 |
| Hyphomicrobium methylovorum GM2 | 2 |
| Methylosinus trichosporium | 2 |
| Methylosinus sporium | 2 |
| Corallococcus coralloides | 2 |
| Adiantum capillus-veneris | 2 |
| Astragalus | 2 |
| Methylomonas aminofaciens 77a | 2 |
| Caulobacter vibrioides NA1000 | 2 |
| Burkholderia terrae KU-15 | 2 |
| Aurantimonas manganoxydans SI85-9A1 | 2 |
| Gardenia jasminoides | 2 |
| Annwoodia aquaesulis | 2 |
| Thermithiobacillus tepidarius | 2 |
| Pseudaminobacter salicylatoxidans | 2 |
| Advenella mimigardefordensis | 2 |
| Pseudomonas putida HS12 | 2 |
| Comamonas testosteroni CNB-1 | 2 |
| Tanacetum parthenium | 2 |
| Solidago canadensis | 2 |
| Pseudarthrobacter sulfonivorans | 2 |
| Arthrobacter methylotrophus | 2 |
| Gentiana triflora | 2 |
| Coix lacryma-jobi | 2 |
| Aphelandra squarrosa | 2 |
| Thiocapsa roseopersicina | 2 |
| Acidovorax sp. JS42 | 2 |
| Rubia tinctorum | 2 |
| Lavandula angustifolia | 2 |
| Fischerella ambigua UTEX 1903 | 2 |
| Bixa orellana | 2 |
| Vibrio cholerae O139 | 2 |
| Salvia splendens | 2 |
| Glandularia x hybrida | 2 |
| Thiobacillus thioparus TK-m | 2 |
| Hyphomicrobium sp. S | 2 |
| Hyphomicrobium sp. EG | 2 |
| Micromonospora sp. ACM2-092 | 2 |
| Micromonospora sp. ML1 | 2 |
| Thermoanaerobacterium thermosaccharolyticum | 2 |
| Cyberlindnera mrakii | 2 |
| Amycolatopsis methanolica | 2 |
| Corynebacterium glutamicum R | 2 |
| Rhodovulum sulfidophilum | 2 |
| Populus tremula x Populus tremuloides | 2 |
| Pseudomonas sp. NCIB 8858 | 2 |
| Synechococcus sp. RS9916 | 2 |
| Magnolia grandiflora | 2 |
| Neisseria meningitidis Z2491 | 2 |
| Neisseria gonorrhoeae MS11 | 2 |
| Neisseria gonorrhoeae FA 1090 | 2 |
| Paracoccus denitrificans PD1222 | 2 |
| Vaccinium myrtillus | 1 |
| Microchaete diplosiphon | 1 |
| Leptolyngbya boryana | 1 |
| Prauserella rugosa | 1 |
| Bacillus sp. HYS-1 | 1 |
| Chlorophyta | 1 |
| Paraburkholderia phenoliruptrix | 1 |
| Pseudomonas moorei | 1 |
| Psilocybe cyanescens | 1 |
| Psilocybe cubensis | 1 |
| Desulfuromonas acetoxidans DSM 684 | 1 |
| Pigmentiphaga sp. DL-8 | 1 |
| Streptomyces wedmorensis | 1 |
| Methanopyrus kandleri AV19 | 1 |
| Rhizobium etli | 1 |
| Variovorax sp. WDL1 | 1 |
| Variovorax sp. SRS16 | 1 |
| Variovorax sp. PBS-H4 | 1 |
| Staphylococcus aureus aureus | 1 |
| Streptomyces rochei | 1 |
| Rhodococcus percolatus | 1 |
| Setophoma sacchari | 1 |
| Ralstonia sp. T6 | 1 |
| Eucalyptus piperita | 1 |
| Atractylodes lancea | 1 |
| Hedychium | 1 |
| Guatteria friesiana | 1 |
| Guatteria blepharophylla | 1 |
| Guatteria hispida | 1 |
| Magnolia obovata | 1 |
| Proteus vulgaris OX2 | 1 |
| Proteus penneri 26 | 1 |
| Escherichia coli O98 | 1 |
| Bacteroides fragilis ATCC 23745 | 1 |
| Vibrio cholerae O37 | 1 |
| Ralstonia pickettii LD1 | 1 |
| Comamonas testosteroni JH5 | 1 |
| Rhodococcus opacus GM-14 | 1 |
| Streptomyces lasaliensis NRRL3382R | 1 |
| Streptomyces ambofaciens ATCC 23877 | 1 |
| Pseudanabaena limnetica Castaic Lake | 1 |
| Armillaria mellea | 1 |
| Armillaria gallica | 1 |
| Pseudomonas aeruginosa O5 | 1 |
| Pseudomonas sp. YL | 1 |
| Bacillus cereus ATCC 14579 | 1 |
| Salipiger bermudensis HTCC2601 | 1 |
| Metallosphaera cuprina | 1 |
| Shewanella algae | 1 |
| Saccharopolyspora | 1 |
| Acidianus sp. A1-3 | 1 |
| Ochrobactrum tritici | 1 |
| Herminiimonas arsenicoxydans | 1 |
| arsenite-oxidizing bacterium NT-14 | 1 |
| Arthrobacter aurescens TW17 | 1 |
| Streptococcus equinus | 1 |
| Lactobacillus salivarius | 1 |
| Phaeosphaeria sp. L487 | 1 |
| Thiothrix ramosa | 1 |
| Thioalkalivibrio paradoxus | 1 |
| Salmonella enterica O54 | 1 |
| Sauromatum venosum | 1 |
| Pseudo-nitzschia multiseries | 1 |
| Plasmodium falciparum HB3 | 1 |
| Pyricularia oryzae | 1 |
| Lawsonia inermis | 1 |
| Agrobacterium tumefaciens S33 | 1 |
| Shinella sp. HZN7 | 1 |
| Ochrobactrum rhizosphaerae SJY1 | 1 |
| Starmerella bombicola | 1 |
| Robbsia andropogonis | 1 |
| Auxenochlorella pyrenoidosa | 1 |
| Haloferax sp. D1227 | 1 |
| Vulcanisaeta distributa | 1 |
| Thermosphaera aggregans | 1 |
| Thermoproteus uzoniensis | 1 |
| Thermogladius calderae | 1 |
| Thermofilum pendens | 1 |
| Thaumarchaeota archaeon | 1 |
| Pyrolobus fumarii | 1 |
| Methanothermococcus thermolithotrophicus | 1 |
| Methanolobus psychrophilus | 1 |
| Methanolinea tarda | 1 |
| Ignisphaera aggregans | 1 |
| Halorhabdus utahensis | 1 |
| Halanaeroarchaeum sulfurireducens | 1 |
| Geoglobus acetivorans | 1 |
| Fervidicoccus fontis | 1 |
| Ferroglobus placidus | 1 |
| Desulfurococcus amylolyticus | 1 |
| Cenarchaeum symbiosum | 1 |
| Candidatus Nitrososphaera gargensis | 1 |
| Candidatus Nitrosopelagicus brevis | 1 |
| Candidatus Methanoplasma termitum | 1 |
| Candidatus Methanomassiliicoccus intestinalis | 1 |
| Candidatus Korarchaeum cryptofilum | 1 |
| Caldivirga maquilingensis | 1 |
| Caldisphaera lagunensis | 1 |
| Acidilobus saccharovorans | 1 |
| Nocardiopsis sp. K-290 | 1 |
| Nonomuraea longicatena | 1 |
| Methanocella conradii HZ254 | 1 |
| Geobacter sulfurreducens PCA | 1 |
| Desulfurivibrio alkaliphilus AHT 2 | 1 |
| Desulfosporosinus orientis DSM 765 | 1 |
| Desulfosporosinus acidiphilus SJ4 | 1 |
| Desulfofarcimen acetoxidans DSM 771 | 1 |
| Desulfocapsa sulfexigens DSM 10523 | 1 |
| Desulfatibacillum alkenivorans AK-01 | 1 |
| Desulfallas gibsoniae DSM 7213 | 1 |
| Acetohalobium arabaticum | 1 |
| Saccharolobus shibatae | 1 |
| Salmonella enterica enterica serovar Paratyphi C | 1 |
| Salmonella enterica enterica serovar Paratyphi B | 1 |
| Prochlorococcus marinus MIT 9211 | 1 |
| Francisella tularensis novicida U112 | 1 |
| Desulfofundulus kuznetsovii DSM 6115 | 1 |
| Erysiphaceae | 1 |
| Pseudomonas sp. HZN6 | 1 |
| Pseudomonas putida S16 | 1 |
| Thermacetogenium phaeum DSM 12270 | 1 |
| Methanolobus psychrophilus R15 | 1 |
| Geobacter lovleyi SZ | 1 |
| Santalum austrocaledonicum | 1 |
| Santalum spicatum | 1 |
| Brevibacterium sp. DPO 1361 | 1 |
| Streptococcus pneumoniae 23F | 1 |
| Thioalkalivibrio thiocyanodenitrificans | 1 |
| Thioalkalivibrio paradoxus ARh 1 | 1 |
| Halobacterium sp. JP-6 | 1 |
| Salmonella enterica enterica serovar Paratyphi A | 1 |
| Enterococcus raffinosus | 1 |
| Forsythia koreana | 1 |
| Enterococcus gallinarum | 1 |
| Thiobacillus thioparus THI 115 | 1 |
| Thiohalophilus thiocyanatoxydans | 1 |
| Acinetobacter junii | 1 |
| Citrus junos | 1 |
| Mycobacterium ulcerans | 1 |
| Vitis labrusca | 1 |
| Senecio | 1 |
| Freesia hybrid cultivar | 1 |
| Actinoplanes missouriensis | 1 |
| Methanocaldococcus fervens | 1 |
| Methanobrevibacter | 1 |
| Oryza | 1 |
| Streptomyces sp. K01-0509 | 1 |
| Rhodococcus N-774 | 1 |
| Yersinia enterocolitica (type O:8) | 1 |
| Sporomusa silvacetica | 1 |
| Propionispora vibrioides | 1 |
| Paenibacillus borealis | 1 |
| Desulfovibrio termitidis | 1 |
| Desulfovibrio piger | 1 |
| Desulfovibrio fairfieldensis | 1 |
| Desulfovibrio desulfuricans DSM 642 | 1 |
| Desulfitobacterium dehalogenans | 1 |
| Bilophila wadsworthia | 1 |
| Bifidobacterium tissieri | 1 |
| Bacteroidales bacterium Barb6XT | 1 |
| Malus domestica Holsteiner Cox | 1 |
| Malus domestica Golden Delicious | 1 |
| Pleurotus sapidus | 1 |
| Candidatus Endobugula sertula | 1 |
| Streptomyces glaucescens | 1 |
| Neptuniibacter caesariensis | 1 |
| Serratia marcescens H30 | 1 |
| Linum | 1 |
| Syntrophus gentianae | 1 |
| Syntrophus buswellii | 1 |
| Syntrophus aciditrophicus | 1 |
| Serratia plymuthica 4Rx13 | 1 |
| Psychromonas ingrahamii | 1 |
| Dickeya dadantii | 1 |
| Pericallis cruenta | 1 |
| Chrysanthemum x morifolium | 1 |
| Actinosynnema mirum DSM 43827 | 1 |
| Pseudonocardia sp. P1 | 1 |
| Streptomyces ribosidificus | 1 |
| Tephrosia vogelii | 1 |
| unidentified bacterium MM-P | 1 |
| unidentified bacterium DG-C1 | 1 |
| Alteromonas macleodii | 1 |
| Kluyveromyces marxianus | 1 |
| Chelatococcus asaccharovorans | 1 |
| Thuja plicata | 1 |
| Forsythia x intermedia | 1 |
| Zea mays huehuetenangensis | 1 |
| Zea mays mexicana | 1 |
| Zea mays parviglumis | 1 |
| Syzygium aromaticum | 1 |
| Zea luxurians | 1 |
| Phormia regina | 1 |
| Helicoverpa armigera | 1 |
| unidentified bacterium BIS-6 | 1 |
| Actinomycete S4 | 1 |
| Bacillus brevis Nagano | 1 |
| Aneurinibacillus migulanus | 1 |
| Derris elliptica | 1 |
| gamma proteobacterium HTCC2207 | 1 |
| Sagittula stellata E-37 | 1 |
| Burkholderia ambifaria AMMD | 1 |
| Pseudomonas fluorescens KU-7 | 1 |
| Arthrobacter | 1 |
| Arabidopsis thaliana Ws | 1 |
| Aspergillus clavatus | 1 |
| Pimelobacter sp. R48 | 1 |
| Pseudomonas putida H262 | 1 |
| Thermus caldophilus | 1 |
| Halodesulfovibrio aestuarii DSM 10141 | 1 |
| Vertebrata lanosa | 1 |
| Fusarium lateritium | 1 |
| Crypthecodinium cohnii | 1 |
| Neosiphonia paniculata | 1 |
| Ulva curvata | 1 |
| DSMP-degrading bacterium LFR | 1 |
| Sulfitobacter sp. EE-36 | 1 |
| Sulfitobacter sp. NAS-14.1 | 1 |
| Yoonia vestfoldensis SKA53 | 1 |
| Labrenzia aggregata IAM 12614 | 1 |
| Dinoroseobacter shibae DFL 12 = DSM 16493 | 1 |
| Pseudooceanicola batsensis HTCC2597 | 1 |
| Maritimibacter alkaliphilus HTCC2654 | 1 |
| Fulvimarina pelagi HTCC2506 | 1 |
| Rhodobacter sphaeroides ATCC 17029 | 1 |
| Aspergillus sydowii | 1 |
| Populus | 1 |
| Heliobacterium modesticaldum Ice1 | 1 |
| Desulfurococcus mucosus | 1 |
| Halomonas sp. HTNK1 | 1 |
| Pseudomonas sp. B<sub>2</sub>aba | 1 |
| Camellia taliensis | 1 |
| [Ruminococcus] gnavus | 1 |
| Lachnospiraceae bacterium | 1 |
| ruegeria frisia | 1 |
| Desulfobacterium sp. PM4 | 1 |
| Desulfobacterium niacini | 1 |
| Desulfobacterium vacuolatum | 1 |
| Candidatus Pelagibacter ubique HTCC1062 | 1 |
| Ruegeria atlantica | 1 |
| Rhizobium tropici | 1 |
| Azorhizobium caulinodans | 1 |
| Arthrobacter sp. Q36 | 1 |
| Methanococcus vannielii | 1 |
| Mentha aquatica citrata | 1 |
| Serratia liquefaciens | 1 |
| Bromus inermis | 1 |
| Desulfovibrio fructosivorans | 1 |
| Fusarium graminearum 70E1 | 1 |
| Fusarium graminearum GZ3639 | 1 |
| Spartina | 1 |
| Ancylobacter aquaticus | 1 |
| Hydrogenibacillus schlegelii | 1 |
| Herbaspirillum autotrophicum | 1 |
| Hydrogenophaga flava | 1 |
| Hydrogenophaga palleronii | 1 |
| Hydrogenophilus thermoluteolus | 1 |
| Mycobacterium gordonae | 1 |
| Pseudomonas hydrogenovora | 1 |
| Ancylobacter vacuolatus | 1 |
| Xanthobacter flavus | 1 |
| Pelosinus fermentans DSM 17108 | 1 |
| Xylella fastidiosa | 1 |
| Tannerella forsythia | 1 |
| Pseudonocardia autotrophica | 1 |
| Methanolobus tindarius | 1 |
| Methanoculleus marisnigri | 1 |
| Thalictrum tuberosum | 1 |
| Coptis japonica dissecta | 1 |
| Thermoproteus | 1 |
| Thermomicrobium | 1 |
| Thermobaculum | 1 |
| Sphaerobacter | 1 |
| Pyrobaculum | 1 |
| Natronomonas | 1 |
| Natrialba | 1 |
| Ignicoccus | 1 |
| Haloterrigena | 1 |
| Halomicrobium | 1 |
| Haloferax | 1 |
| Haloarcula | 1 |
| Halalkalicoccus | 1 |
| Gluconobacter oxydans UV10 | 1 |
| Gluconobacter oxydans IFO 3255 | 1 |
| Ketogulonicigenium vulgare | 1 |
| Hyoscyamus muticus | 1 |
| Tanacetum vulgare | 1 |
| Tanacetum balsamita | 1 |
| Cupriavidus necator N-1 | 1 |
| Cupressus | 1 |
| Brassica oleracea italica | 1 |
| Chlamydomonas | 1 |
| Janthinobacterium lividum | 1 |
| Duganella sp. B2 | 1 |
| Collimonas sp. CT | 1 |
| Chromobacterium violaceum ATCC 12472 | 1 |
| Streptomyces rubellomurinus | 1 |
| Propionigenium modestum | 1 |
| Nostoc commune | 1 |
| Methanoplanus limicola | 1 |
| Methanococcales | 1 |
| Sesamum alatum | 1 |
| Euphorbia lagascae | 1 |
| Vaccinia virus | 1 |
| Sulfurimonas denitrificans | 1 |
| Desulfobacter hydrogenophilus | 1 |
| Candidatus Arcobacter sulfidicus | 1 |
| Geobacillus kaustophilus | 1 |
| Serratia proteamaculans 568 | 1 |
| Mycobacterium tuberculosis complex | 1 |
| Flavobacterium johnsoniae UW101 | 1 |
| Flavobacterium johnsoniae | 1 |
| Vernonia galamensis | 1 |
| Crepis palaestina | 1 |
| Methanothrix soehngenii | 1 |
| Toxoplasma gondii RH | 1 |
| Toxoplasma gondii ME49 | 1 |
| Toxoplasma gondii | 1 |
| Eimeria tenella | 1 |
| Eimeria | 1 |
| Bacillus subtilis natto | 1 |
| Desulfovibrio vulgaris Miyazaki F | 1 |
| Streptococcus oralis | 1 |
| Bacillus fastidiosus | 1 |
| Fischerella sp. SAG 46.79 | 1 |
| Fischerella muscicola UTEX 1829 | 1 |
| Pyrus pyrifolia | 1 |
| Gluconobacter | 1 |
| Streptomyces galbus | 1 |
| Streptomyces ornatus | 1 |
| Myxozyma melibiosi | 1 |
| Providencia stuartii | 1 |
| Stemphylium loti | 1 |
| Microdochium sorghi | 1 |
| Pyrobaculum arsenaticum | 1 |
| Citrus x microcarpa | 1 |
| Trifolium incarnatum | 1 |
| Populus tremuloides | 1 |
| Streptomyces aizunenesis NRRL-B-11277 | 1 |
| Streptomyces leeuwenhoekii | 1 |
| Sporosarcina globispora | 1 |
| Brevibacterium | 1 |
| Lilium longiflorum | 1 |
| Vaccinium vitis-idaea | 1 |
| Salvia hispanica | 1 |
| Portulaca oleracea | 1 |
| Hippophae rhamnoides | 1 |
| Pseudomonas putida SQ1 | 1 |
| Roseiflexus sp. RS-1 | 1 |
| Chloroflexus aggregans | 1 |
| Tanacetum cinerariifolium | 1 |
| Kitasatospora phosalacinea | 1 |
| Pantoea stewartii stewartii | 1 |
| Pyrobaculum neutrophilum V24Sta | 1 |
| Cestrum elegans | 1 |
| Pseudomonas sp. Y2 | 1 |
| [Butyribacterium] methylotrophicum | 1 |
| Syntrophococcus sucromutans | 1 |
| Sporomusa termitida | 1 |
| Sporomusa malonica | 1 |
| Moorella thermoautotrophica | 1 |
| Acetitomaculum ruminis | 1 |
| Actinoplanes utahensis | 1 |
| Mentha x gracilis | 1 |
| Viburnum furcatum | 1 |
| Brassica nigra | 1 |
| Streptomyces sp. strain V-1 | 1 |
| Pseudomonas fluorescens AN103 | 1 |
| Amycolatopsis sp. HR167 | 1 |
| Amycolatopsis sp. ATCC 39116 | 1 |
| Thalassiosira pseudonana | 1 |
| Phytophthora infestans | 1 |
| Aureococcus anophagefferens | 1 |
| Rhodococcus sp | 1 |
| Pinus banksiana | 1 |
| Escherichia coli O25b:ST131 | 1 |
| Escherichia coli ATCC 25922 | 1 |
| Spirodela polyrhiza | 1 |
| Thiomonas delicata | 1 |
| Sulfuriferula plumbiphila | 1 |
| Silene latifolia alba | 1 |
| Brevibacillus laterosporus | 1 |
| Bacillus mycoides | 1 |
| Pseudomonas putida P35X | 1 |
| Saccharolobus solfataricus 98/2 | 1 |
| Perilla citriodora | 1 |
| Cinnamomum tenuipile | 1 |
| Moraxella sp | 1 |
| Pseudomonas putida N-9 | 1 |
| Pseudomonas fluorescens TN5 | 1 |
| Pseudomonas fluorescens ATCC 23728 | 1 |
| Bordetella bronchiseptica RB50 | 1 |
| Streptomyces sp. C5 | 1 |
| Centaurium erythraea | 1 |
| Rhodococcus globerulus | 1 |
| Nitrospira moscoviensis | 1 |
| Nitrospina | 1 |
| Nitrococcus | 1 |
| Nitrobacter winogradskyi | 1 |
| Nitrobacter vulgaris | 1 |
| Nitrobacter hamburgensis | 1 |
| Nitrobacter alkalicus | 1 |
| Nitrobacter | 1 |
| Bacillus niacini | 1 |
| Pseudomonas sp. MS | 1 |
| Foeniculum vulgare dulce | 1 |
| Sphingobium japonicum BiD32 | 1 |
| Thiocapsa marina | 1 |
| Marichromatium purpuratum | 1 |
| Candidatus Thiodictyon syntrophicum Cad16 | 1 |
| Eubacterium barkeri | 1 |
| Fusarium graminearum 88-1 | 1 |
| Fusarium graminearum 79A1 | 1 |
| Haliangium ochraceum | 1 |
| Chondromyces apiculatus | 1 |
| Methanothrix | 1 |
| Thermococcus onnurineus | 1 |
| Streptomyces scabiei 87.22 | 1 |
| Septoria lycopersici | 1 |
| Passalora fulva | 1 |
| Fusarium oxysporum sp. lycopersici | 1 |
| Clavibacter michiganensis michiganensis | 1 |
| Alternaria solani | 1 |
| Clostridium aminobutyricum | 1 |
| Clostridium perfringens A99 | 1 |
| Bacillus amyloliquefaciens 140N | 1 |
| Paenibacillus polymyxa SC2 | 1 |
| Bacillus atrophaeus 1942 | 1 |
| Bacillus velezensis FZB42 | 1 |
| Streptomyces sp. K30 | 1 |
| Gordonia westfalica | 1 |
| Gordonia polyisoprenivorans | 1 |
| Herbaspirillum seropedicae | 1 |
| Paecilomyces sp. (in: Eurotiomycetes) | 1 |
| Microbacterium sp | 1 |
| Methanococcoides sp. NaT1 | 1 |
| Methanococcus | 1 |
| Pythium irregulare | 1 |
| Phytophthora cactorum | 1 |
| Haematococcus lacustris | 1 |
| Agrobacterium aurantiacum | 1 |
| Pseudomonas fluorescens BL915 | 1 |
| Pseudomonas chlororaphis aureofaciens | 1 |
| Burkholderia cepacia complex | 1 |
| Crepis alpina | 1 |
| Cantharellus formosus | 1 |
| Ips pini | 1 |
| Ips paraconfusus | 1 |
| Ips confusus | 1 |
| Bacillus stearothermophilus BR388 | 1 |
| Pseudomonas sp. PL | 1 |
| Paenibacillus sp. JJ-1b | 1 |
| Rhodococcus sp. TE1 | 1 |
| Streptomyces albidoflavus | 1 |
| Methylobacillus flagellatus KT | 1 |
| Nocardioides sp. C190 | 1 |
| Paenarthrobacter aurescens TC1 | 1 |
| Nocardioides sp. SP12 | 1 |
| Aminobacter ciceronei | 1 |
| Propionibacterium cyclohexanicum | 1 |
| Pectinatus frisingensis | 1 |
| Azotobacter vinelandii NBRC 102612 | 1 |
| Scheffersomyces stipitis CBS 6054 | 1 |
| Debaryomyces hansenii CBS767 | 1 |
| Burkholderia cenocepacia | 1 |
| Tetrahymena thermophila | 1 |
| Penicillium janthinellum | 1 |
| Nocardioides sp. JS1661 | 1 |
| Sphingomonas sp. SKA58 | 1 |
| Vitis labrusca x Vitis vinifera | 1 |
| Rubus idaeus strigosus | 1 |
| Mangifera indica | 1 |
| Ananas comosus | 1 |
| Bradyrhizobium sp. JS329 | 1 |
| Pseudomonas straminea | 1 |
| Streptomyces thioluteus | 1 |
| Streptomyces sp. MM23 | 1 |
| Rhodococcus sp. TMP1 | 1 |
| Sinapis alba | 1 |
| Isatis tinctoria | 1 |
| Streptococcus | 1 |
| Shewanella putrefaciens 200 | 1 |
| Clostridium ventriculi | 1 |
| Acetobacter | 1 |
| Prochlorococcus phage P-SSM4 | 1 |
| Prochlorococcus phage P-SSM2 | 1 |
| [Bacillus] caldovelox | 1 |
| Pseudomonas simiae | 1 |
| Paraburkholderia phytofirmans | 1 |
| Paraburkholderia bryophila | 1 |
| Lemna aequinoctialis | 1 |
| Yersinia sp. EA015 | 1 |
| Aquilaria crassna | 1 |
| Gyrinops | 1 |
| Plesiomonas sp. Yoshida 95 | 1 |
| Scytonema sp | 1 |
| Kocuria varians | 1 |
| Asanoa ferruginea | 1 |
| Paenibacillus popilliae | 1 |
| Methanoplanus | 1 |
| Triticum spelta | 1 |
| Schizophyllum commune | 1 |
| Pleurotus ostreatus | 1 |
| Pichia fermentans | 1 |
| Lentinus sajor-caju | 1 |
| Grifola frondosa | 1 |
| Agaricus bisporus | 1 |
| Weissella paramesenteroides | 1 |
| Weissella confusa | 1 |
| Leuconostoc mesenteroides dextranicum | 1 |
| Lactobacillus sanfranciscensis | 1 |
| Synechococcus sp. WH 8020 | 1 |
| Vibrio anguillarum serovar O2 | 1 |
| Caulobacter vibrioides | 1 |
| Ribes nigrum | 1 |
| Oenothera biennis | 1 |
| Borago officinalis | 1 |
| Algoriphagus sp. KK10202C | 1 |
| Pseudomonas sp. MA-1 | 1 |
| Ochrobactrum | 1 |
| Picea sitchensis | 1 |
| Prochloron didemni P2-Fiji | 1 |
| Trichoderma reesei QM9414 | 1 |
| Methanolobus vulcani B1d | 1 |
| Amylomyces rouxii | 1 |
| Cymbopogon martinii | 1 |
| Cymbopogon flexuosus | 1 |
| Vibrio fluvialis JS17 | 1 |
| Proteiniphilum acetatigenes | 1 |
| Prevotella paludivivens | 1 |
| Paraprevotella xylaniphila | 1 |
| Paraprevotella clara | 1 |
| Parabacteroides sp. CAG:409 | 1 |
| Parabacteroides goldsteinii | 1 |
| Bacteroides | 1 |
| Acidiphilium | 1 |
| Butyrivibrio fibrisolvens | 1 |
| Cerastium arvense | 1 |
| Pseudomonas entomophila L48 | 1 |
| Suberites domuncula | 1 |
| Scapharca broughtonii | 1 |
| Pecten maximus | 1 |
| Pecten jacobaeus | 1 |
| Patiria pectinifera | 1 |
| Meretrix lusoria | 1 |
| Marphysa sanguinea | 1 |
| Littorina littorea | 1 |
| Haliotis tuberculata lamellosa | 1 |
| Halichondria japonica | 1 |
| Cellana grata | 1 |
| Busycotypus canaliculatus | 1 |
| Arabella iricolor | 1 |
| Thioflavicoccus mobilis | 1 |
| Thiococcus pfennigii | 1 |
| Thioalkalicoccus limnaeus | 1 |
| Halorhodospira abdelmalekii | 1 |
| Ochrobactrum anthropi | 1 |
| Blautia hydrogenotrophica DSM 10507 | 1 |
| Actinobacillus succinogenes 130Z | 1 |
| Chlorobium phaeovibrioides DSM 265 | 1 |
| Pseudomonas taiwanensis | 1 |
| Halorubrum lacusprofundi | 1 |
| Penicillium digitatum ATCC 201167 | 1 |
| Ruminococcus albus NE1 | 1 |
| Ruminococcus albus 7 = DSM 20455 | 1 |
| Vibrio sp. JT0107 | 1 |
| Xanthomonas campestris pv. campestris | 1 |
| Nonlabens ulvanivorans | 1 |
| Bacillus sp. GL1 | 1 |
| Rhodococcus sp. C1 | 1 |
| Kribbella flavida | 1 |
| Thermincola potens JR | 1 |
| Methanohalophilus mahii DSM 5219 | 1 |
| Methanohalobium evestigatum Z-7303 | 1 |
| Methanococcoides burtonii DSM 6242 | 1 |
| Desulfitobacterium hafniense DCB-2 | 1 |
| Bilophila wadsworthia 3_1_6 | 1 |
| Acetohalobium arabaticum DSM 5501 | 1 |
| Sphingomonas sp. A1 | 1 |
| Schizonepeta tenuifolia | 1 |
| Carum carvi | 1 |
| Labrenzia aggregata | 1 |
| Eukaryota | 1 |
| Staphylococcus sciuri | 1 |
| Leptospira biflexa serovar Patoc | 1 |
| Geobacter sulfurreducens | 1 |
| Thermosynechococcus elongatus | 1 |
| Bradyrhizobium sp. SEMIA 6144 | 1 |
| Bradyrhizobium diazoefficiens USDA 110 | 1 |
| Nicotiana plumbaginifolia | 1 |
| Syntrophomonas wolfei | 1 |
| Dorea longicatena | 1 |
| Anaerotruncus colihominis | 1 |
| Cucurbita pepo | 1 |
| Fusarium phaseoli | 1 |
| Scutellaria viscidula | 1 |
| Escherichia coli Crookes | 1 |
| Psychrobacter urativorans | 1 |
| Salvia stenophylla | 1 |
| Pseudomonas fluorescens 2-79 | 1 |
| Penicillium olsonii | 1 |
| Aspergillus flavus NRRL3357 | 1 |
| Yersinia kristensenii | 1 |
| Yersinia intermedia | 1 |
| Yersinia frederiksenii | 1 |
| Shigella flexneri | 1 |
| Shigella boydii | 1 |
| Rhizobium leguminosarum bv. viciae 3841 | 1 |
| Bacillus halodurans | 1 |
| Lactococcus garvieae 20-92 | 1 |
| Asaccharobacter celatus AHU1763 | 1 |
| Slackia sp. NATTS | 1 |
| Slackia isoflavoniconvertens | 1 |
| human intestinal bacterium SNU-Julong732 | 1 |
| Adlercreutzia equolifaciens | 1 |
| Lipomyces starkeyi | 1 |
| Cadra cautella | 1 |
| Spodoptera | 1 |
| Acheta domesticus | 1 |
| Periplaneta fuliginosa | 1 |
| Myzus cerasi | 1 |
| Chrysopa | 1 |
| [Clostridium] symbiosum | 1 |
| [Clostridium] sporosphaeroides | 1 |
| Acidaminococcus fermentans | 1 |
| Olea europaea | 1 |
| Sphingomonas lacus | 1 |
| Sphingomonas astaxanthinifaciens | 1 |
| Pseudomonas cepacia 122 | 1 |
| Pseudomonas sp GU5 | 1 |
| Mycoplasma pneumoniae | 1 |
| Cucurbita pepo medullosa | 1 |
| Euglena | 1 |
| Chromatium | 1 |
| Clostridium SB4 | 1 |
| Clostridium subterminale | 1 |
| Clostridium peptidivorans | 1 |
| Gordonia sp. TY-5 | 1 |
| Tritrichomonas suis | 1 |
| Phytomonas | 1 |
| Leishmania mexicana | 1 |
| Leishmania infantum | 1 |
| Mycobacterium sp. Py1 | 1 |
| Mycobacterium goodii strain 12523 | 1 |
| bacterium | 1 |
| Mycobacterium sp. ELW1 | 1 |
| Lachnospiraceae bacterium 19gly4 | 1 |
| Escherichia coli J53-1 | 1 |
| Pseudomonas sp. K-62 | 1 |
| Bacillus sp. RC607 | 1 |
| Synechococcus sp. PCC 7335 | 1 |
| Polaribacter irgensii 23-P | 1 |
| Methanobrevibacter ruminantium | 1 |
| Mycolicibacterium rhodesiae JS60 | 1 |
| Treponema vincentii | 1 |
| Treponema phagedenis | 1 |
| Rhodococcus sp. AD45 | 1 |
| Sipunculus nudus | 1 |
| Mytilus trossulus | 1 |
| Mytilus galloprovincialis | 1 |
| Mytilus californianus | 1 |
| Corbicula japonica | 1 |
| Chondrus crispus | 1 |
| Staphylococcus pseudintermedius | 1 |
| Staphylococcus aureus aureus NCTC 8325 | 1 |
| Shewanella denitrificans | 1 |
| Methylobacterium nodulans | 1 |
| Cupriavidus metallidurans | 1 |
| Pseudomonas putida GPo1 | 1 |
| Fluoribacter bozemanae | 1 |
| Sphingomonas elodea | 1 |
| Sandarakinorhabdus limnophila | 1 |
| Porphyrobacter tepidarius | 1 |
| Erythrobacter longus | 1 |
| Zoogloea ramigera | 1 |
| Azotobacter beijerinckii | 1 |
| Robinia pseudoacacia | 1 |
| Anabaena sp. 90 | 1 |
| Paraburkholderia sacchari | 1 |
| Todarodes pacificus | 1 |
| Onchidium | 1 |
| Doryteuthis pealeii | 1 |
| Bordetella parapertussis | 1 |
| Bordetella bronchiseptica | 1 |
| Achromobacter xylosoxidans | 1 |
| Lilium lancifolium | 1 |
| Aesculus | 1 |
| Mycobacterium butyricum | 1 |
| Streptomyces sp. TP-A0274 | 1 |
| Streptomyces longisporoflavus | 1 |
| Streptomyces actuosus | 1 |
| Lentzea albida | 1 |
| Acinetobacter baumannii AYE | 1 |
| Acinetobacter baumannii ACICU | 1 |
| Streptococcus agalactiae NEM316 | 1 |
| Vibrionaceae | 1 |
| Pseudomonas putida strain PaWl | 1 |
| Chaetomium globosum | 1 |
| [Brevibacterium] flavum | 1 |
| Leptospira meyeri | 1 |
| Prochloron didemni | 1 |
| Telluria mixta | 1 |
| Methylovorus sp. MP688 | 1 |
| Paraburkholderia phymatum | 1 |
| Pseudomonas sp. P<sub>G</sub> | 1 |
| Pseudomonas sp. ATCC 17483 | 1 |
| pseudomonas putida NP | 1 |
| Pseudomonas putida ATCC 17484 | 1 |
| Camellia sinensis sinensis | 1 |
| Setaria italica | 1 |
| delta proteobacterium N47 | 1 |
| bacterium enrichment culture clone N47 | 1 |
| Streptomyces lysosuperificus | 1 |
| Streptomyces chartreusis | 1 |
| Aeromonas salmonicida | 1 |
| Agrobacterium radiobacter S2 | 1 |
| Hydrogenophaga intermedia | 1 |
| Cuphea wrightii | 1 |
| Vibrio cholerae 569B | 1 |
| Nepenthes rafflesiana | 1 |
| Nepenthes alata | 1 |
| Xanthomonas oryzae pv. oryzae | 1 |
| Panicum miliaceum | 1 |
| Amaranthus hypochondriacus | 1 |
| Amaranthus hybridus cruentus | 1 |
| Pseudomonas putida KT2442 | 1 |
| Achromobacter | 1 |
| Rhodococcus opacus 1CP | 1 |
| Urochloa panicoides | 1 |
| Megathyrsus maximus | 1 |
| Gelatoporia subvermispora | 1 |
| Comamonas testosteroni KF-1 | 1 |
| Alteromonas sp. ATCC 43554 | 1 |
| Pseudoalteromonas sp. CL19 | 1 |
| Oxalobacter formigenes | 1 |
| Pseudomonas putida GJ31 | 1 |
| Pseudomonas fluorescens SK1 | 1 |
| Pseudomonas veronii 16-6A | 1 |
| Pseudomonas sp. MG61 | 1 |
| Sterculia foetida | 1 |
| Rhodopirellula baltica | 1 |
| Pseudoalteromonas sp. LL1 | 1 |
| Pseudoalteromonas sp. AJ5 | 1 |
| Coraliomargarita akajimensis DSM 45221 | 1 |
| Cupriavidus oxalaticus | 1 |
| Pseudomonas sp. C6 (2012) | 1 |
| Lysinibacillus massiliensis | 1 |
| Bacillus smithii | 1 |
| Bacillus subtilis spizizenii ATCC 6633 | 1 |
| Prunus mume | 1 |
| Prunus dulcis | 1 |
| Pseudomonas putida JD1 | 1 |
| Pseudomonas fluorescens ACB | 1 |
| Paracoccus denitrificans NCIMB 8944 | 1 |
| Plesiomonas sp. M6 | 1 |
| Aspergillus itaconicus | 1 |
| Sphingomonas sp. SS3 | 1 |
| Sphingomonas sp. PH-07 | 1 |
| Erwinia sp | 1 |
| Cupriavidus sp. WS | 1 |
| Pseudomonas fluorescens ST | 1 |
| Pseudomonas sp. VLB120 | 1 |
| Nannizzia racemosa | 1 |
| Xanthothecium peruvianum | 1 |
| Uncinocarpus reesii | 1 |
| Trichophyton simii | 1 |
| Trichophyton mentagrophytes | 1 |
| Thermoascus crustaceus | 1 |
| Thermoascus aurantiacus | 1 |
| Thermoascus | 1 |
| Shanorella spirotricha | 1 |
| Sander vitreus | 1 |
| Rattus | 1 |
| Pucciniastrum boehmeriae | 1 |
| Puccinia coronata avenae f. sp. avenae | 1 |
| Pieris rapae | 1 |
| Penicillium malachiteum | 1 |
| Pectinotrichum llanense | 1 |
| Paraphyton cookei | 1 |
| Onygena equina | 1 |
| Onygena corvina | 1 |
| Nannizzia persicolor | 1 |
| Nannizzia nana | 1 |
| Nannizzia incurvata | 1 |
| Nannizzia gypsea | 1 |
| Nannizzia fulva | 1 |
| Microsporum canis | 1 |
| Melampsora epitea | 1 |
| Lophophyton gallinae | 1 |
| Ctenomyces serratus | 1 |
| Cladophora | 1 |
| Ascosphaera proliperda | 1 |
| Ascosphaera major | 1 |
| Ascosphaera atra | 1 |
| Ascosphaera asterophora | 1 |
| Ascosphaera apis | 1 |
| Ascosphaera | 1 |
| Arthrodermataceae | 1 |
| Arthroderma quadrifidum | 1 |
| Arthroderma curreyi | 1 |
| Arthroderma borellii | 1 |
| Arachnotheca glomerata | 1 |
| Arachnomyces minimus | 1 |
| Apinisia graminicola | 1 |
| Aspergillus quadricinctus | 1 |
| Pseudomonas LD2 | 1 |
| Sphingomonas sp. XLDN2-5 | 1 |
| Sphingomonas sp. CB3 | 1 |
| Pseudomonas rhodesiae | 1 |
| Neptuniibacter sp. CAR-SF | 1 |
| Azoarcus sp. EB1 | 1 |
| Aromatoleum bremense | 1 |
| Tissierella creatinophila | 1 |
| Tissierella creatinini | 1 |
| Pseudomonas sp. Ps7 | 1 |
| Arthrobacter sp. TE1826 | 1 |
| Comamonas testosteroni 63 | 1 |
| Brevundimonas diminuta | 1 |
| Rhodococcus sp. N-771 | 1 |
| Bacillus sp. OxB-1 | 1 |
| Pseudomonas sp. SG-MS2 | 1 |
| Comamonas sp. E6 | 1 |
| Sphingomonas paucimobilis | 1 |
| Sphingobium sp. SYK-6 | 1 |
| Burkholderia mallei | 1 |
| Saccharomyces chevalieri | 1 |
| Pseudomonas putida KL47 | 1 |
| Paul's Scarlet Climber Rose | 1 |
| Pelargonium crispum | 1 |
| Eggerthella lenta A2 | 1 |
| Enterococcus faecalis EnGen0310 = MMH594 | 1 |
| Pseudomonas sp. AP3 | 1 |
| Pseudomonas sp. HH69 | 1 |
| Terrabacter sp. DPO360 | 1 |
| Burkholderia sp. JB1 | 1 |
| Verticillium sp. DSP | 1 |
| Streptomyces sp. AC7 | 1 |
| Stenotrophomonas sp. G1 | 1 |
| Paracoccus sp. TRP | 1 |
| Ochrobactrum sp. JAS2 | 1 |
| Cupriavidus sp. DT-1 | 1 |
| Pseudomonas putida O1 | 1 |
| Roccella tinctoria | 1 |
| Pseudomonas putida J | 1 |
| Streptomyces noursei ATCC 11455 | 1 |
| Pseudomonas sp. ML2 | 1 |
| Corynebacterium sp. strain SY1 | 1 |
| Rhodococcus sp. IGTS8 | 1 |
| Rhodococcus erythropolis XP | 1 |
| Paenibacillus sp. A11-2 | 1 |
| Mycobacterium sp. G3 | 1 |
| Pseudomonas putida PL-W | 1 |
| Ustilago syntherismae | 1 |
| Ustilago nuda | 1 |
| Ustilago hordei | 1 |
| Tilletia caries | 1 |
| Sphinx ligustri | 1 |
| Lithobates catesbeianus | 1 |
| Myxotrichum stipitatum | 1 |
| Myxotrichum chartarum | 1 |
| Monascus ruber | 1 |
| Monascus purpureus | 1 |
| Monascus pilosus | 1 |
| Keratinophyton terreum | 1 |
| Keratinophyton saturnoideum | 1 |
| Keratinophyton hispanicum | 1 |
| Gymnoascus demonbreunii | 1 |
| Graphiola phoenicis | 1 |
| Coccinella | 1 |
| Chrysosporium keratinophilum | 1 |
| Aspergillus cejpii | 1 |
| Aphanoascus verrucosus | 1 |
| Amauroascus aureus | 1 |
| Agrius cingulata | 1 |
| Tecoma stans | 1 |
| Jasminum grandiflorum | 1 |
| Alcaligenes sp. N-42 | 1 |
| Pseudomonas putida UCC22 | 1 |
| Delftia tsuruhatensis AD9 | 1 |
| Delftia acidovorans 7N | 1 |
| Frateuria sp. ANA-18 | 1 |
| Delftia sp. AN3 | 1 |
| Acinetobacter sp. YAA | 1 |
| Acinetobacter lwoffii K24 | 1 |
| Burkholderia sp. AK-5 | 1 |
| Salinispora tropica | 1 |
| Shewanella amazonensis SB2B | 1 |
| Agrobacterium rhizogenes | 1 |
| Lactobacillus rhamnosus GG | 1 |
| Alternaria brassicicola ATCC 96836 | 1 |
| Rhizobium sp. MTP-10005 | 1 |
| [Candida] vartiovaarae | 1 |
| [Candida] succiphila | 1 |
| [Candida] stellimalicola | 1 |
| [Candida] sonorensis | 1 |
| [Candida] silvicultrix | 1 |
| [Candida] rugopelliculosa | 1 |
| [Candida] quercuum | 1 |
| [Candida] pseudolambica | 1 |
| [Candida] pini | 1 |
| [Candida] ovalis | 1 |
| [Candida] odintsovae | 1 |
| [Candida] norvegica | 1 |
| [Candida] nitratophila | 1 |
| [Candida] nemodendra | 1 |
| [Candida] nanaspora | 1 |
| [Candida] montana | 1 |
| [Candida] methanosorbosa | 1 |
| [Candida] maritima | 1 |
| [Candida] maris | 1 |
| [Candida] inconspicua | 1 |
| [Candida] ethanolica | 1 |
| [Candida] dendrica | 1 |
| [Candida] berthetii | 1 |
| Wickerhamomyces mucosus | 1 |
| Wickerhamomyces anomalus | 1 |
| Starmera caribaea | 1 |
| Starmera amethionina | 1 |
| Saturnispora silvae | 1 |
| Saturnispora diversa | 1 |
| Pichia norvegensis | 1 |
| Phaffomyces opuntiae | 1 |
| Ogataea salicorniae | 1 |
| Ogataea pignaliae | 1 |
| Nakazawaea wickerhamii | 1 |
| Nakazawaea peltata | 1 |
| Kregervanrija fluxuum | 1 |
| [Candida] sorboxylosa | 1 |
| Candida solani | 1 |
| Candida freyschussii | 1 |
| Candida cariosilignicola | 1 |
| Barnettozyma pratensis | 1 |
| Barnettozyma californica | 1 |
| Ambrosiozyma llanquihuensis | 1 |
| Trifolium repens | 1 |
| Starmerella stellata | 1 |
| [Candida] rhagii | 1 |
| Starmerella lactis-condensi | 1 |
| [Candida] gotoi | 1 |
| Wickerhamiella galacta | 1 |
| Clavispora fructus | 1 |
| [Candida] fennica | 1 |
| Nakazawaea populi | 1 |
| Nakazawaea ishiwadae | 1 |
| Nakazawaea holstii | 1 |
| Nakazawaea ernobii | 1 |
| Nakazawaea anatomiae | 1 |
| Kuraishia capsulata | 1 |
| Hyphopichia homilentoma | 1 |
| Hyphopichia burtonii | 1 |
| Clavispora lusitaniae | 1 |
| Citeromyces matritensis | 1 |
| Candida silvanorum | 1 |
| Candida sequanensis | 1 |
| Candida karawaiewii | 1 |
| [Candida] incommunis | 1 |
| Candida entomophila | 1 |
| Aplysia californica | 1 |
| Arthrobacter synephrinum | 1 |
| Pseudomonas sp. KIE171 | 1 |
| Cassia coluteoides | 1 |
| Arthrobacter protophormiae R4 | 1 |
| Alcaligenes sp. strain L6 | 1 |
| Staphylococcus aureus aureus N315 | 1 |
| chromatium vinosum strain D | 1 |
| Ephedra gerardiana | 1 |
| Cucurbita pepo Early Prolific Straightneck | 1 |
| Aquilegia vulgaris | 1 |
| Azotobacter chroococcum | 1 |
| Acinetobacter lwoffii | 1 |
| Adonis aestivalis | 1 |
| Coniochaeta ligniaria | 1 |
| Mycobacterium avium complex (MAC) | 1 |
| Pseudomonas fluorescens DSM 8341 | 1 |
| Moraxella sp. B | 1 |
| Burkholderia sp. FA1 | 1 |
| Pyrococcus sp. ST04 | 1 |
| Caldicellulosiruptor saccharolyticus | 1 |
| Pteris vittata | 1 |
| Watasenia scintillans | 1 |
| Photinus pyralis | 1 |
| Luciola mingrelica | 1 |
| Aquatica lateralis | 1 |
| Neonothopanus nambi | 1 |
| Neonothopanus gardneri | 1 |
| Mycena chlorophos | 1 |
| Renilla reniformis | 1 |
| Renilla muelleri | 1 |
| Aequorea victoria | 1 |
| Aequorea aequorea | 1 |
| Paracoccus laeviglucosivorans | 1 |
| Photobacterium phosphoreum | 1 |
| Pyrocystis noctiluca | 1 |
| Pyrocystis lunula | 1 |
| Pyrocystis fusiformis | 1 |
| Protoperidinium depressum | 1 |
| Noctiluca scintillans | 1 |
| Lingulodinium polyedra | 1 |
| Alexandrium tamarense | 1 |
| Crambe hispanica abyssinica | 1 |
| Streptomyces hygroscopicus ATCC 21705 | 1 |
| Streptomyces viridochromogenes DSM 40736 | 1 |
| Streptomyces viridochromogenes | 1 |
| Hordeum vulgare vulgare | 1 |
| Sphingobacterium mizutaii | 1 |
| Desulfosarcina cetonica | 1 |
| Desulfococcus biacutus | 1 |
| Botryococcus braunii BOT88-2 | 1 |
| Ascochyta rabiei | 1 |
| Actinidia eriantha | 1 |
| Ipomoea purpurea | 1 |
| Lymnaea stagnalis | 1 |
| Psilotum nudum | 1 |
| Solanum | 1 |
| Trichinella spiralis | 1 |
| Syngamus trachea | 1 |
| Stephanurus dentatus | 1 |
| Moniezia expansa | 1 |
| Haemonchus contortus | 1 |
| Dictyocaulus viviparus | 1 |
| Narcissus pseudonarcissus | 1 |
| Carica papaya | 1 |
| Vibrio sp. EJY3 | 1 |
| Pseudoalteromonas atlantica T6c | 1 |
| Postechiella marina | 1 |
| Brevundimonas aurantiaca | 1 |
| Candida cloacae | 1 |
| Luffa aegyptiaca | 1 |
| Kalanchoe daigremontiana | 1 |
| Dicranum scoparium | 1 |
| Ceratodon purpureus | 1 |
| Thermoplasma volcanium | 1 |
| Rickettsia prowazekii Madrid E | 1 |
| Rickettsia prowazekii | 1 |
| Chlamydia trachomatis D/UW-3/CX | 1 |
| Chlamydia psittaci | 1 |
| Litchi chinensis | 1 |
| Euonymus alatus | 1 |
| Bacillariophyta | 1 |
| Cydia pomonella | 1 |
| Lygodium circinatum | 1 |
| Pantoea cypripedii | 1 |
| Natrialba magadii | 1 |
| Ensifer adhaerens | 1 |
| Pseudoalteromonas haloplanktis | 1 |
| Planococcus citreus | 1 |
| Nesterenkonia halobia | 1 |
| Deinococcus radiophilus | 1 |
| Rheum tataricum | 1 |
| Hydrangea macrophylla | 1 |
| Arachis hypogaea | 1 |
| Streptococcus pneumoniae R6 | 1 |
| Micromonospora rosaria | 1 |
| Vibrio sp. XY-214 | 1 |
| Vibrio sp. AX-4 | 1 |
| Alcaligenes sp. XY-234 | 1 |
| Chrysosporium lucknowense | 1 |
| Ajuga reptans | 1 |
| Aloe ferox | 1 |
| Leishmania braziliensis | 1 |
| Leishmania donovani species complex | 1 |
| Leishmania mexicana species complex | 1 |
| Leishmania tarentolae | 1 |
| Leishmania tropica species complex | 1 |
| Phleum pratense | 1 |
| Dimorphandra mollis | 1 |
| Geotrichum sp. M128 | 1 |
| Aspergillus fischeri NRRL 181 | 1 |
| Bacillus halodurans C-125 | 1 |
| Nicotiana glutinosa | 1 |
| Streptomyces avermitilis MA-4680 = NBRC 14893 | 1 |
| Nitratiruptor sp. SB155-2 | 1 |
| Deinococcus radiodurans R1 | 1 |
| Acidothermus cellulolyticus 11B | 1 |
| Acinetobacter haemolyticus | 1 |
| Marichromatium gracile | 1 |
| Diutina rugosa | 1 |
| Diutina catenulata | 1 |
| Candida albicans SC5314 | 1 |
| Streptomyces zaomyceticus | 1 |
| Streptomyces narbonensis | 1 |
| Streptomyces flavochromogenes | 1 |
| Streptomyces felleus | 1 |
| symbiont bacterium of Paederus fuscipes | 1 |
| Paederus sabaeus endosymbiont | 1 |
| Tagetes patula | 1 |
| Tagetes erecta | 1 |
| Rudbeckia hirta | 1 |
| Streptococcus uberis | 1 |
| Croton | 1 |
| Croton sublyratus | 1 |
| Rhodococcus <high GC Gram+> | 1 |
| Micromonospora | 1 |
| Actinomadura | 1 |
| Nocardiopsis | 1 |
| Trypanosoma vivax | 1 |
| Trypanosoma brucei brucei | 1 |
| Pelobacter venetianus | 1 |
| Pelobacter carbinolicus DSM 2380 | 1 |
| Clostridium magnum | 1 |
| Nerine bowdenii | 1 |
| Narcissus aff. pseudonarcissus MK-2014 | 1 |
| Galanthus elwesii | 1 |
| Rhodophiala bifida bifida | 1 |
| Prevotella denticola | 1 |
| Prevotella dentalis | 1 |
| Bacteroides salanitronis | 1 |
| Bacteroides helcogenes | 1 |
| Alistipes finegoldii | 1 |
| Mycobacterium vaccae JOB5 | 1 |
| Mycobacterium austroafricanum IFP 2015 | 1 |
| Mycobacterium austroafricanum IFP 2012 | 1 |
| Hydrogenophaga flava ENV735 | 1 |
| Methylibium petroleiphilum PM1 | 1 |
| Aquincola tertiaricarbonis | 1 |
| Rhodococcus erythropolis JCM 6824 | 1 |
| Streptomyces nodosus asukaensis | 1 |
| Thalictrum bulgaricum | 1 |
| Vibrio anguillarum serovar O1 | 1 |
| Clostridium paraputrificum D 762-06 | 1 |
| Clostridium innocuum D1144/3 | 1 |
| Blautia producta K 2/25.1 | 1 |
| Eggerthella sp. CAG:298 | 1 |
| Clostridium sp. ATCC 29733 | 1 |
| Sandaracinus amylolyticus | 1 |
| Methylosarcina lacus | 1 |
| Methylobacter luteus | 1 |
| Eudoraea adriatica | 1 |
| Pseudomonas sp. NCIB 10590 | 1 |
| Mycobacterium sp. NRRL B-3683 | 1 |
| Arthrobacter sp. SLBN-53 | 1 |
| Mycolicibacterium neoaurum VKM Ac-1815D | 1 |
| Paraburkholderia rhizoxinica | 1 |
| Stigmatella aurantiaca Sg a15 | 1 |
| Digitalis grandiflora | 1 |
| Paenibacillus polymyxa E681 | 1 |
| Corydalis cava | 1 |
| Photobacterium sp. SKA34 | 1 |
| Photobacterium angustum S14 | 1 |
| Phaeobacter inhibens 2.10 | 1 |
| Methylorubrum populi BJ001 | 1 |
| Methylorubrum extorquens PA1 | 1 |
| Methylorubrum extorquens CM4 | 1 |
| Marinobacter hydrocarbonoclasticus | 1 |
| Marinobacter hydrocarbonoclasticus VT8 | 1 |
| Bacillus thuringiensis [] serovar konkukian str. 97-27 | 1 |
| Bacillus clausii KSM-K16 | 1 |
| Bacillus cereus G9241 | 1 |
| Bacillus anthracis Sterne | 1 |
| Ruminococcus gnavus N53 | 1 |
| Clostridium sardiniense | 1 |
| Streptomyces kanamyceticus | 1 |
| Streptoalloteichus tenebrarius | 1 |
| Methanothermobacter thermautotrophicus Winter | 1 |
| Laminaria digitata | 1 |
| Fucus gardneri | 1 |
| Streptomyces lincolnensis | 1 |
| Berberis | 1 |
| Thalictrum flavum glaucum | 1 |
| Lampranthus sociorum | 1 |
| Ruminococcus sp. PO1-3 | 1 |
| Methanobacterium ivanovii | 1 |
| Peptoclostridium litorale | 1 |
| Peptoclostridium acidaminophilum | 1 |
| Clostridium aceticum | 1 |
| Malonomonas rubra | 1 |
| Nicotiana benthamiana | 1 |
| Streptomyces melanosporofaciens | 1 |
| Amycolatopsis mediterranei U32 | 1 |
| Pseudomonas syringae pv. syringae B728a | 1 |
| Prototheca wickerhamii | 1 |
| Haloarcula japonica | 1 |
| Fusarium incarnatum | 1 |
| Streptomyces peucetius caesius ATCC 27952 | 1 |
| Olsenella uli | 1 |
| Atopobium rimae | 1 |
| Toxicodendron vernicifluum | 1 |
| Helicobacter pylori DMS 6709 | 1 |
| Neisseria gonorrhoeae | 1 |
| Helicobacter bizzozeronii CIII-1 | 1 |
| Berberis beaniana | 1 |
| Corydalis saxicola | 1 |
| Corynebacterium sp. SHS 0007 | 1 |
| Dietzia sp. CQ4 | 1 |
| Actinidia | 1 |
| Novosphingobium aromaticivorans | 1 |
| Flaveria chlorifolia | 1 |
| Ketogulonicigenium vulgare DSM 4025 | 1 |
| Streptomyces sp. CS | 1 |
| Streptomyces griseosporeus | 1 |
| Streptomyces diastatochromogenes | 1 |
| Coptis teeta | 1 |
| Chelidonium majus | 1 |
| Acanthamoeba sp | 1 |
| Phycomyces blakesleeanus | 1 |
| Rosa | 1 |
| Pseudomonas putida T | 1 |
| Pseudomonas putida TG2T | 1 |
| Aeromonas jandaei | 1 |
| Vanrija humicola | 1 |
| Pseudomonas sp. NCIMB 10558 | 1 |
| Thermococcus sp. B1001 | 1 |
| Acholeplasma laidlawii | 1 |
| Prunella vulgaris | 1 |
| Pyrococcus furiosus DSM 3638 | 1 |
| Corynebacterium sp. B6 | 1 |
| Arthrobacter sp. 9759 | 1 |
| Pseudomonas cruciviae | 1 |
| Solanum melongena | 1 |
| Solanum aculeatissimum | 1 |
| Melissa officinalis | 1 |
| Plumbago indica | 1 |
| Plumbago europaea | 1 |
| Salvia fruticosa | 1 |
| Salvia rosmarinus | 1 |
| Geobacillus thermodenitrificans NG80-2 | 1 |
| Streptomyces galilaeus | 1 |
| Aureispira marina | 1 |
| Penicillium verrucosum | 1 |
| Penicillium thymicola | 1 |
| Penicillium nordicum | 1 |
| Aspergillus westerdijkiae | 1 |
| Aspergillus steynii | 1 |
| Aspergillus ochraceus | 1 |
| Aspergillus carbonarius | 1 |
| Escherichia coli K-12 substr. MG1656 | 1 |
| Taxus x media | 1 |
| Taxus chinensis | 1 |
| Taxus canadensis | 1 |
| Taxus brevifolia | 1 |
| Taxus baccata | 1 |
| Methanobacterium formicicum | 1 |
| Metschnikowia pulcherrima | 1 |
| Capsicum frutescens | 1 |
| Prunus serotina | 1 |
| Lactobacillus paraplantarum | 1 |
| Pseudomonas sp. TPU 7192 | 1 |
| Francisella tularensis tularensis SCHU S4 | 1 |
| Datura inoxia | 1 |
| Lysobacter dokdonensis | 1 |
| Kocuria rhizophila | 1 |
| Arenimonas malthae | 1 |
| Streptomyces alboniger | 1 |
| Jeotgalicoccus sp. ATCC 8456 | 1 |
| Nicotiana rustica | 1 |
| Croton linearis | 1 |
| Allium tuberosum | 1 |
| Vicia sativa nigra | 1 |
| Phlebodium aureum | 1 |
| Davallia trichomanoides | 1 |
| Trichosanthes kirilowii | 1 |
| Punica granatum | 1 |
| Kluyveromyces lactis | 1 |
| Methanococcoides burtonii | 1 |
| Cephalocereus senilis | 1 |
| Rosales | 1 |
| Streptomyces orinoci | 1 |
| Lupinus polyphyllus | 1 |
| Aspergillus clavatus NRRL 1980 | 1 |
| Penicillium urticae | 1 |
| Penicillium griseofulvum | 1 |
| Polaribacter filamentus | 1 |
| Gemmata sp. Wa1-1 | 1 |
| Actinobacteria <actinobacteria> | 1 |
| Clostridium bifermentans DPH-1 | 1 |
| Sulfurospirillum multivorans | 1 |
| Desulfitobacterium chlororespirans | 1 |
| Dehalococcoides mccartyi VS | 1 |
| Dehalobacter restrictus | 1 |
| Vernicia fordii | 1 |
| Momordica charantia | 1 |
| Mycoplasma genitalium | 1 |
| Ammi majus | 1 |
| Wachendorfia thyrsiflora | 1 |
| Anigozanthos preissii | 1 |
| Sphingobium japonicum | 1 |
| Plasmodium vivax | 1 |
| Plasmodium ovale | 1 |
| Plasmodium malariae | 1 |
| Streptomyces echinatus | 1 |
| Albizia tanganyicensis | 1 |
| Vogesella indigofera | 1 |
| Ochromonas danica | 1 |
| Allium ursinum | 1 |
| Allium schoenoprasum | 1 |
| Allium nutans | 1 |
| Allium fistulosum | 1 |
| Dimorphotheca sinuata | 1 |
| Pseudomonas sp. 7B | 1 |
| Streptomyces violaceochromogenes | 1 |
| Leishmania donovani | 1 |
| Arthrobacter sp. KUJ8602 | 1 |
| Pseudomonas fluorescens 23F | 1 |
| Leisingera caerulea | 1 |
| Thermococcus stetteri | 1 |
| Thermococcus celer | 1 |
| Allium cepa aggregatum | 1 |
| Macaca fuscata | 1 |
| Macaca mulatta | 1 |
| Ulva intestinalis | 1 |
| Melosira nummuloides | 1 |
| Tetraselmis | 1 |
| Ulva lactuca | 1 |
| Botryococcus braunii race L | 1 |
| Wollastonia biflora | 1 |
| Streptomyces lavendulae lavendulae | 1 |
| Streptomyces garyphalus | 1 |
| Palmaria palmata | 1 |
| Digenea simplex | 1 |
| Nepeta racemosa | 1 |
| Nepeta cataria | 1 |
| Alangium lamarckii | 1 |
| Carapichea ipecacuanha | 1 |
| Passiflora edulis | 1 |
| Thraustochytrium sp. ATCC21685 | 1 |
| Pavlova lutheri | 1 |
| Marchantia polymorpha | 1 |
| Escherichia coli IHE3034 | 1 |
| Streptomyces luridus | 1 |
| Piper nigrum | 1 |
| Petiveria alliacea | 1 |
| Moritella marina ATCC 15381 | 1 |
| Sulfolobus islandicus | 1 |
| Penicillium palitans | 1 |
| Taraxacum kok-saghyz | 1 |
| Plesiomonas shigelloides | 1 |
| Trigonella foenum-graecum | 1 |
| Capsicum baccatum | 1 |
| Mycobacterium sp. HL 4-NT-1 | 1 |
| Neisseria meningitidis serogroup B | 1 |
| Escherichia coli K1 | 1 |
| Escherichia coli BL21(DE3) | 1 |
| Pseudomonas putida B2 | 1 |
| Rhododendron dauricum | 1 |
| Pseudomonas fluorescens NCIMB 10586 | 1 |
| Oxybasis rubra | 1 |
| Legionella pneumophila pneumophila Philadelphia 1 | 1 |
| Umezakia natans | 1 |
| Raphidiopsis curvata | 1 |
| Oscillatoria sp. PCC 7926 | 1 |
| Cylindrospermopsis raciborskii AWT205 | 1 |
| Chrysosporum ovalisporum | 1 |
| Anabaena bergii | 1 |
| Rhodococcus opacus SAO101 | 1 |
| Sphingobium sp. UG30 | 1 |
| Serratia sp. DS001 | 1 |
| Rhodococcus sp. PN1 | 1 |
| Pseudomonas sp. ENV2030 | 1 |
| Pseudomonas putida JS444 | 1 |
| Pseudomonas putida DLL-E4 | 1 |
| Pseudomonas sp. NyZ402 | 1 |
| Moraxella | 1 |
| Trichosporon moniliiforme WU-0401 | 1 |
| Cutaneotrichosporon moniliiforme | 1 |
| Pinus sabiniana | 1 |
| Pinus ponderosa | 1 |
| Caryophyllaceae | 1 |
| Allium siculum | 1 |
| Conium maculatum | 1 |
| Micrococcus percitreus | 1 |
| Bacillus sp. No. 230 | 1 |
| Brachybacterium conglomeratum | 1 |
| Populus alba | 1 |
| Bacillus azotoformans | 1 |
| Streptomyces morookaense | 1 |
| Streptomyces griseochromogenes | 1 |
| Caryophyllales | 1 |
| Talaromyces stipitatus | 1 |
| Azospira sp. PCC | 1 |
| Azospira sp. KJ | 1 |
| Dechloromonas sp. PC1 | 1 |
| Dechloromonas sp. MissR | 1 |
| Dechloromonas agitata | 1 |
| Azospirillum sp. TTI | 1 |
| Shewanella sp. GA-22 | 1 |
| Shewanella pneumatophori | 1 |
| Shewanella hanedai | 1 |
| Schizochytrium sp. ATCC 20888 | 1 |
| Psychromonas ingrahamii 37 | 1 |
| Psychroflexus torquis ATCC 700755 | 1 |
| Photobacterium profundum SS9 | 1 |
| Colwellia psychrerythraea 34H | 1 |
| Pseudomonas chloritidismutans | 1 |
| Ideonella dechloratans | 1 |
| Azospira oryzae | 1 |
| Pseudomonas syringae pv. syringae | 1 |
| Renibacterium salmoninarum | 1 |
| Tetragenococcus koreensis | 1 |
| Enterobacter asburiae | 1 |
| Enterobacter hormaechei | 1 |
| Pantoea stewartii | 1 |
| Pseudomonas alcaligenes | 1 |
| Pseudomonas chlororaphis | 1 |
| Pseudomonas clemancea | 1 |
| Pseudomonas collierea | 1 |
| Pseudomonas teessidea | 1 |
| Aspergillus alliaceus | 1 |
| Fusarium Caucasicum | 1 |
| Arthrobacter pascens | 1 |
| Cylindrocarpon didymum | 1 |
| Fusarium anguioides | 1 |
| Rhodopseudomonas palustris DSM 123 | 1 |
| Rhodopseudomonas palustris TIE-1 | 1 |
| Rhodopseudomonas palustris BisB5 | 1 |
| [Bacillus] selenitireducens | 1 |
| Sulfurospirillum barnesii | 1 |
| Sulfurospirillum arsenophilum | 1 |
| Chrysiogenes arsenatis | 1 |
| Anaerobacillus arseniciselenatis | 1 |
| Chamaecyparis obtusa | 1 |
| Aspergillus tubingensis | 1 |
| Photorhabdus laumondii laumondii TTO1 | 1 |
| Blighia sapida | 1 |
| Burkholderia cepacia 2CBS | 1 |
| Candidatus Scalindua wagneri | 1 |
| Candidatus Scalindua brodae | 1 |
| Candidatus Kuenenia stuttgartiensis | 1 |
| Candidatus Jettenia caeni | 1 |
| Candidatus Brocadia anammoxidans | 1 |
| Candidatus Anammoxoglobus | 1 |
| Phialophora <family Herpotrichiellaceae> | 1 |
| Komagataella phaffii GS115 | 1 |
| Astacus leptodactylus | 1 |
| Aspergillus | 1 |
| Arthrobacter globiformis KZT1 | 1 |
| Arthrobacter sp. 4-CB1 | 1 |
| Pseudomonas sp. CBS3 | 1 |
| Arthrobacter sp. TM1 | 1 |
| Arthrobacter sp. SU | 1 |
| Physaria | 1 |
| Lunaria annua | 1 |
| Streptomyces davaonensis | 1 |
| Streptomyces cinnabarinus | 1 |
| Fischerella sp. ATCC 43239 | 1 |
| Escherichia coli K-12 substr. DH10B | 1 |
| Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | 1 |
| Hedera helix | 1 |
| Coriandrum sativum | 1 |
| Thermodesulfovibrio yellowstonii | 1 |
| Thermodesulforhabdus norvegica | 1 |
| Desulfovibrio vulgaris Hildenborough | 1 |
| Desulfofundulus kuznetsovii | 1 |
| Desulfallas geothermicus | 1 |
| Desulfofundulus australicus | 1 |
| Archaeoglobus profundus | 1 |
| Agrobacterium sp. 525a | 1 |
| Clostridium malenominatum | 1 |
| Hathewaya limosa | 1 |
| Anaeromusa acidaminophila | 1 |
| Mirabilis jalapa | 1 |
| Cleretum bellidiforme | 1 |
| Escherichia coli O44:K74 | 1 |
| Pimpinella | 1 |
| Xanthomonas translucens | 1 |
| Dolichandra unguis-cati | 1 |
| Escherichia coli O52 | 1 |
| Tyria jacobaeae | 1 |
| Apantesis nevadensis geneura | 1 |
| Estigmene acrea | 1 |
| Diacrisia sannio | 1 |
| Arctia caja | 1 |
| Vibrio sp. K-7 | 1 |
| Bacteroides sp. DeMoss 69 | 1 |
| Symbiobacterium thermophilum | 1 |
| Paenibacillus alvei | 1 |
| Fusobacterium varium | 1 |
| Lamium galeobdolon | 1 |
| Hordeum lechleri | 1 |
| Consolida orientalis | 1 |
| Burkholderia sp. NK8 | 1 |
| Actinomadura kijaniata | 1 |
| Rhizophoraceae | 1 |
| Rhizophora apiculata | 1 |
| Rhizophora mangle | 1 |
| Streptomyces lividus | 1 |
| Shewanella denitrificans OS217 | 1 |
| Citrus trifoliata | 1 |
| Citrus hanaju | 1 |
| Citrus clementina | 1 |
| Sophora flavescens | 1 |
| Lentzea aerocolonigenes | 1 |
| Peganum harmala | 1 |
| Alcaligenes sp. strain A175 | 1 |
| Malus sp | 1 |
| Malus pumila | 1 |
| Malus hupehensis | 1 |
| Xanthobacter agilis | 1 |
| Pseudomonas nitroreducens J5-1 | 1 |
| Dryopteris crassirhizoma | 1 |
| Epichloe hybrida | 1 |
| Claviceps fusiformis | 1 |
| Balansia obtecta | 1 |
| Lactobacillaceae | 1 |
| Alcaligenes sp. strain OBB65 | 1 |
| Bacillus cereus PF-11 | 1 |
| Klebsiella pneumoniae O3 | 1 |
| Escherichia coli O9a | 1 |
| Streptomyces ravidus | 1 |
| Escherichia coli O86:B7 | 1 |
| Escherichia coli O86 | 1 |
| Dalbergia nigrescens | 1 |
| Escherichia coli O5 | 1 |
| Escherichia coli O104 | 1 |
| Penicilliopsis zonata | 1 |
| Aspergillus carneus | 1 |
| Neonectria obtusispora | 1 |
| Pandoraea pnomenusa | 1 |
| Burkholderia sp. JS150 | 1 |
| Pseudomonas amygdali pv. sesami | 1 |
| Pseudomonas savastanoi pv. glycinea | 1 |
| Alcaligenes sp. CF8 | 1 |
| Pseudomonas sp. CBB1 | 1 |
| Microbacterium oxydans IH-35A | 1 |
| Acinetobacter sp. SE19 | 1 |
| Brachymonas petroleovorans CHX | 1 |
| Brevibacterium epidermidis | 1 |
| Nocardia globerula | 1 |
| Coffea eugenioides | 1 |
| Pseudomonas sp. strain VM15C | 1 |
| Alcaligenes faecalis KK314 | 1 |
| Sphingopyxis sp. 113P3 | 1 |
| Citrobacter sp. S-77 | 1 |
| Streptomyces achromogenes rubradiris | 1 |
| Escherichia coli B SPAO | 1 |
| Cryptococcus albidus IFO 0939 | 1 |
| Streptomyces sp. KCTC 0041BP | 1 |
| Coffea liberica | 1 |
| Coffea liberica dewevrei | 1 |
| Coffea abeokutae | 1 |
| Schizosaccharomyces pombe 972h- | 1 |
| Trichoderma harzianum | 1 |
| Gypsophila vaccaria | 1 |
| Escherichia coli O7:K1 | 1 |
| Pseudomonas putida WS | 1 |
| Pseudomonas putida No. 352 | 1 |
| Pseudomonas putida KD6 | 1 |
| Pseudomonas putida C1 | 1 |
| Pseudomonas putida 40 | 1 |
| Yersinia ruckeri | 1 |
| Photobacterium halotolerans | 1 |
| Zygosaccharomyces rouxii | 1 |
| Synechococcus nidulans | 1 |
| Chlorogloeopsis fritschii | 1 |
| Alcaligenes viscolactis S-2 | 1 |
| Arthrobacter agilis | 1 |
| Paenarthrobacter aurescens | 1 |
| Pseudarthrobacter oxydans | 1 |
| Arthrobacter ramosus | 1 |
| Cellulosimicrobium cellulans | 1 |
| Cellulomonas fimi | 1 |
| Cellulomonas flavigena | 1 |
| Paenarthrobacter ilicis | 1 |
| Oerskovia turbata | 1 |
| Corynebacterium matruchotii | 1 |
| Corynebacterium ammoniagenes | 1 |
| Corynebacterium stationis | 1 |
| Corynebacterium variabile | 1 |
| Corynebacterium bovis | 1 |
| Corynebacterium callunae | 1 |
| Gordonia amarae | 1 |
| Actinomadura madurae | 1 |
| Actinomadura pelletieri | 1 |
| Saccharopolyspora rectivirgula | 1 |
| Streptomyces spiralis | 1 |
| Promicromonospora citrea | 1 |
| Streptomyces platensis | 1 |
| Streptomyces somaliensis | 1 |
| Rhodobacter capsulatus SB 1003 | 1 |
| Mucor circinelloides | 1 |
| Picea glauca | 1 |
| Pseudomonas putida 1290 | 1 |
| Paraburkholderia phytofirmans PsJN | 1 |
| Klebsiella pneumoniae pneumoniae MGH 78578 | 1 |
| Neurospora crassa 33933 | 1 |
| Neurospora crassa 15069 | 1 |
| Candida maltosa L4 | 1 |
| Slafractonia leguminicola | 1 |
| Acidovorax avenae | 1 |
| Drosophila <flies,genus> | 1 |
| Raoultella planticola | 1 |
| Lactobacillus sp. 30A | 1 |
| Tetragenococcus muriaticus | 1 |
| Photobacterium damselae | 1 |
| Pediococcus parvulus | 1 |
| Corynebacterium nephridii | 1 |
| Actinomyces israelii | 1 |
| Actinomyces viscosus | 1 |
| Colchicum autumnale | 1 |
| Ruminococcus albus 8 | 1 |
| Oligotropha carboxidovorans | 1 |
| Hydrogenophaga pseudoflava | 1 |
| Agrobacterium | 1 |
| Dugesia japonica | 1 |
| Streptosporangium sibiricum | 1 |
| Halobacterium sp. NCIMB 763 | 1 |
| Ectothiorhodospira haloalkaliphila | 1 |
| Brevibacterium iodinum | 1 |
| Brevibacterium sterolicum | 1 |
| Corynebacterium kutscheri | 1 |
| Corynebacterium pseudotuberculosis | 1 |
| Corynebacterium renale | 1 |
| Corynebacterium ulcerans | 1 |
| Corynebacterium xerosis | 1 |
| Rhodococcus fascians | 1 |
| Rhodococcus corynebacterioides | 1 |
| Nocardia asteroides | 1 |
| Nocardia brasiliensis | 1 |
| Nocardia farcinica | 1 |
| Nocardia transvalensis | 1 |
| Nocardia vaccinii | 1 |
| Rhodococcus rhodnii | 1 |
| Streptomyces gardneri | 1 |
| Amycolatopsis orientalis | 1 |
| Pseudomonas putida PDC | 1 |
| Senecio vernalis | 1 |
| Senecio vulgaris | 1 |
| Anisodus acutangulus | 1 |
| Rhodiola sachalinensis | 1 |
| Rhodiola rosea | 1 |
| Anaerovibrio lipolyticus | 1 |
| Eubacterium oxidoreducens G41 | 1 |
| Teleostei | 1 |
| Physarum polycephalum | 1 |
| Methylomonas sp. 16a | 1 |
| Streptomyces mycarofaciens | 1 |
| Streptomyces verticillus | 1 |
| Streptomyces caespitosus | 1 |
| Pseudomonas Sp. PB16 | 1 |
| Nitrosospira tenuis | 1 |
| Nitrosospira briensis | 1 |
| Nitrosomonas eutropha | 1 |
| Nitrosomonas europaea | 1 |
| Nitrosomonas cryotolerans | 1 |
| Nitrosomonas | 1 |
| Lathyrus sativus | 1 |
| Taphrina wiesneri | 1 |
| Taphrina pruni | 1 |
| Taphrina deformans | 1 |
| Xenopus laevis | 1 |
| Anolis carolinensis | 1 |
| Sceloporus jarrovii | 1 |
| Carassius auratus | 1 |
| Achromobacter sp. Quastel 52 | 1 |
| Dalbergia cochinchinensis | 1 |
| Nocardia uniformis tsuyamanensis | 1 |
| Actinosynnema mirum | 1 |
| Erythroxylum coca | 1 |
| [Flavobacterium] lutescens | 1 |
| Escherichia coli K4 | 1 |
| Acidianus infernus | 1 |
| Ammonifex degensii | 1 |
| Desulfomicrobium baculatum | 1 |
| Desulfurobacterium thermolithotrophum | 1 |
| Desulfuromonas acetexigens | 1 |
| Pyrodictium abyssi | 1 |
| Pyrodictium brockii | 1 |
| Sulfurospirillum deleyianum | 1 |
| Stetteria hydrogenophila | 1 |
| Stygiolobus azoricus | 1 |
| Sulfurospirillum arcachonense | 1 |
| Asterias rubens | 1 |
| Cinchona pubescens | 1 |
| Cinchona pitayensis | 1 |
| Cinchona officinalis | 1 |
| Cinchona mutisii | 1 |
| Cinchona macrocalyx | 1 |
| Cinchona calisaya | 1 |
| Cinchona | 1 |
| Escherichia coli O108 | 1 |
| Helicobacter pylori SS1 | 1 |
| Pseudomonas putida II-B | 1 |
| Pseudomonas fluorescens I-C | 1 |
| Thermococcus onnurineus NA1 | 1 |
| Thermococcus gammatolerans | 1 |
| Pseudomonas savastanoi | 1 |
| Thermoanaerobacterium saccharolyticum | 1 |
| Carboxydothermus hydrogenoformans | 1 |
| Streptomyces roseogriseus | 1 |
| Streptomyces exfoliatus | 1 |
| Streptomyces arenae | 1 |
| Theobroma cacao | 1 |
| Bacillus sp. 8 | 1 |
| Cyanobium gracile PCC 6307 | 1 |
| Sclerotinia sclerotiorum | 1 |
| Fomitopsis palustris | 1 |
| Ectothiorhodospira shaposhnikovii | 1 |
| Tetradesmus obliquus | 1 |
| Pseudomonas sp. P.J. 874 | 1 |
| Gram-negative bacterium ASV2 | 1 |
| Kitasatospora griseola MF730-N6 MF730-N6 | 1 |
| Clostridioides difficile ATCC 9689 = DSM 1296 | 1 |
| Campylobacter fetus | 1 |
| Pseudoalteromonas haloplanktis TAC125 | 1 |
| Pseudanabaena limnetica | 1 |
| Solanum habrochaites 2861 | 1 |
| Solanum habrochaites 2098 | 1 |
| Solanum habrochaites 1777 | 1 |
| Solanum habrochaites 1731 | 1 |
| Yersinia pseudotuberculosis (type O:2a) | 1 |
| Populus tremula x Populus alba | 1 |
| Lemna minor | 1 |
| Lathyrus tingitanus | 1 |
| Streptomyces virginiae | 1 |
| Schistocerca gregaria | 1 |
| Faxonius limosus | 1 |
| Penaeus japonicus | 1 |
| Carcinus maenas | 1 |
| Bemisia tabaci | 1 |
| Variovorax paradoxus B4 | 1 |
| Canis lupus familiaris | 1 |
| Phormidium lapideum | 1 |
| Lyngbya majuscula | 1 |
| Wolinella succinogenes DSM 1740 | 1 |
| Lathyrus odoratus | 1 |
| Fagus crenata | 1 |
| Albizia julibrissin | 1 |
| Streptomyces odorifer | 1 |
| Streptomyces mediolani | 1 |
| Streptomyces lividans | 1 |
| Paracoccus thiophilus | 1 |
| Arthrobacter sp. KI72 | 1 |
| Glycyrrhiza uralensis | 1 |
| Arthrobacter sp. TMP-1 | 1 |
| Citrullus lanatus vulgaris | 1 |
| Aneurinibacillus thermoaerophilus | 1 |
| Rhyparobia maderae | 1 |
| Nauphoeta cinerea | 1 |
| Locusta migratoria | 1 |
| Diploptera punctata | 1 |
| Cyperus iria | 1 |
| Byrsotria fumigata | 1 |
| Blatta orientalis | 1 |
| Blaberus giganteus | 1 |
| Blaberus discoidalis | 1 |
| Escherichia coli UTI89 | 1 |
| Cladosporium cladosporioides | 1 |
| Citrobacter intermedius | 1 |
| Pavlova pinguis | 1 |
| Batis maritima | 1 |
| Endocladia muricata | 1 |
| Pseudomonas aeruginosa TAU-5 | 1 |
| Tellima grandiflora | 1 |
| Mycobacterium gastri | 1 |
| Mycobacterium tuberculosis variant bovis AF2122/97 | 1 |
| Achromobacter superficialis | 1 |
| Methylosphaera | 1 |
| Methylomicrobium japanense | 1 |
| Methylomonas sp. KSPIII | 1 |
| Synechocystis sp. PCC 6803 substr. Kazusa | 1 |
| Methylomonas methanica | 1 |
| Methylomonas fodinarum | 1 |
| Methylomonas aurantiaca | 1 |
| Methylomicrobium pelagicum | 1 |
| Methylomicrobium album | 1 |
| Methylomicrobium agile | 1 |
| Methylococcus thermophilus | 1 |
| Methylobacter marinus | 1 |
| Quercus rubra | 1 |
| Planococcus antarcticus | 1 |
| Paenibacillus terrae | 1 |
| Eggerthella lenta | 1 |
| Desulfosporosinus youngiae | 1 |
| Desulfosporosinus acidiphilus | 1 |
| Cryptobacterium sp. CAG:338 | 1 |
| Collinsella tanakaei | 1 |
| Clostridium colicanis | 1 |
| Clostridioides difficile CD196 | 1 |
| Clostridioides difficile 630 | 1 |
| Bacillus nealsonii | 1 |
| Bacillus bataviensis | 1 |
| Mycobacterium sp. DSM 3803 | 1 |
| Botryococcus braunii BOT22 | 1 |
| Campylobacter jejuni jejuni 81-176 | 1 |
| Gimesia maris DSM 8797 | 1 |
| Streptomyces hygroscopicus 10-22 | 1 |
| Streptomyces hygroscopicus limoneus | 1 |
| Streptomyces hygroscopicus jinggangensis 5008 | 1 |
| Streptomyces hygroscopicus jinggangensis | 1 |
| Vicia faba Chukyo | 1 |
| uncultured bacterium HF130_AEPn_1 | 1 |
| Xenorhabdus nematophila ATCC 19061 | 1 |
| Photorhabdus luminescens | 1 |
| Rhizobium leguminosarum bv. phaseoli | 1 |
| Picrophilus torridus | 1 |
| Acidianus tengchongensis | 1 |
| Acidianus brierleyi | 1 |
| Acidianus | 1 |
| Jacquinia angustifolia | 1 |
| Plectranthus barbatus | 1 |
| Ochrobactrum anthropi GPK 3 | 1 |
| Ochrobactrum sp. G-1 | 1 |
| Oleomonas sagaranensis | 1 |
| Desulfocapsa thiozymogenes | 1 |
| Desulfocapsa | 1 |
| Desulfobulbus | 1 |
| Methyloceanibacter caenitepidi | 1 |
| Fluviicola taffensis | 1 |
| Cystobacter fuscus | 1 |
| Salmonella enterica enterica serovar Adelaide | 1 |
| Pseudoalteromonas tetraodonis | 1 |
| Providencia alcalifaciens | 1 |
| Escherichia coli O111:NM | 1 |
| Thioalkalivibrio thiocyanoxidans | 1 |
| Neptunia | 1 |
| Streptococcus ratti | 1 |
| Spiroplasma citri | 1 |
| Mycoplasma hominis | 1 |
| Lactobacillus hilgardii | 1 |
| Aphanocapsa | 1 |
| Erythrobacter sp. SD-21 | 1 |
| endosymbiont of Riftia pachyptila | 1 |
| Arthrobacter protophormiae RKJ100 | 1 |
| Bacillus pumilus WH4 | 1 |
| Leptothrix discophora strain SS-1 | 1 |
| Pedomicrobium sp. ACM 3067 | 1 |
| Bacillus sp. SG-1 | 1 |
| Bacillus sp. PL-12 | 1 |
| Candida methylica | 1 |
| Pseudomonas putida ZWL73 | 1 |
| Hyphomicrobium denitrificans WU-K217 | 1 |
| Variovorax paradoxus | 1 |
| Metazoa | 1 |
| Pseudomonas stutzeri ZWLR2-1 | 1 |
| Lactuca sativa | 1 |
| Helianthus annuus | 1 |
| Barnadesia spinosa | 1 |
| a non specified bacterium (Kondo 77) | 1 |
| Burkholderia cepacia R34 | 1 |
| Burkholderia sp. DNT | 1 |
| Burkholderia cepacia JS850 | 1 |
| Hydrogenophaga palleronii JS863 | 1 |
| Thermosipho melanesiensis | 1 |
| Thermoanaerobacter pseudethanolicus | 1 |
| Natranaerobius thermophilus | 1 |
| Fervidobacterium nodosum | 1 |
| Alkaliphilus oremlandii | 1 |
| Alkaliphilus metalliredigens | 1 |
| Rhodococcus opacus HL PM-1 | 1 |
| Nocardioides sp. CB 22-2 | 1 |
| Nocardioides simplex FJ2-1A | 1 |
| Ralstonia sp. EDS1 | 1 |
| Pseudomonas deceptionensis | 1 |
| Maricaulis maris MCS10 | 1 |
| Bradyrhizobium diazoefficiens | 1 |
| Afipia felis 25E1 | 1 |
| Afipia felis 25V | 1 |
| Afipia felis 15B1 | 1 |
| Methylosulfonomonas sp. M2 | 1 |
| Marinosulfonomonas methylotropha | 1 |
| Methylosulfonomonas methylovora | 1 |
| Sulfuricella denitrificans | 1 |
| Ruegeria pomeroyi | 1 |
| Magnetospirillum | 1 |
| Magnetococcus | 1 |
| Chlorobium | 1 |
| Rhodococcus erythropolis MI2 | 1 |
| Advenella mimigardefordensis DPN7 | 1 |
| Diospyros kaki | 1 |
| Sulfobacillus thermosulfidooxidans | 1 |
| Sulfitobacter pontiacus | 1 |
| Sulfitobacter | 1 |
| Beggiatoa | 1 |
| Paracoccus pantotrophus NKNCYSA | 1 |
| Anthracobia melaloma | 1 |
| Peziza ostracoderma | 1 |
| Morchella vulgaris | 1 |
| Morchella costata | 1 |
| Gracilariopsis longissima | 1 |
| Gracilariopsis lemaneiformis | 1 |
| Escherichia coli O113 | 1 |
| Betula | 1 |
| Betula pubescens | 1 |
| Staphylococcus aureus aureus KCTC 1928 | 1 |
| Thiobacillus thioparus T5 | 1 |
| Methylophaga thiooxydans | 1 |
| Streptomyces sp. SNA15896 | 1 |
| Tapinella panuoides | 1 |
| Suillus grevillei | 1 |
| Thiocapsa roseopersicina M11 | 1 |
| Populus trichocarpa x Populus deltoides | 1 |
| Rhodococcus sp. strain SY1 | 1 |
| Pseudomonas putida DS1 | 1 |
| Alcaligenes sp. strain E1 | 1 |
| Acinetobacter sp. strain 20B | 1 |
| Micromonospora echinospora | 1 |
| Thalassiosira pseudonana CCMP1335 | 1 |
| Ostreococcus sp. lucimarinus | 1 |
| Cyanidioschyzon merolae strain 10D | 1 |
| Pseudomonas aeruginosa O4 | 1 |
| Pseudomonas aeruginosa O12 | 1 |
| Pseudomonas aeruginosa O11 | 1 |
| Escherichia coli O26 | 1 |
| Streptomyces cattleya | 1 |
| Magnolia | 1 |
| Organism | Number of pathways |
| a non specified bacterium (Kondo 77) | 1 |
| Abies grandis | 12 |
| Acanthamoeba sp | 1 |
| Acer pseudoplatanus | 2 |
| Acetitomaculum ruminis | 1 |
| Acetoanaerobium sticklandii | 4 |
| Acetobacter | 1 |
| Acetobacter aceti | 4 |
| Acetobacter pasteurianus | 2 |
| Acetobacterium carbinolicum | 2 |
| Acetobacterium woodii | 5 |
| Acetohalobium arabaticum | 1 |
| Acetohalobium arabaticum DSM 5501 | 1 |
| Acheta domesticus | 1 |
| Acholeplasma laidlawii | 1 |
| Achromobacter | 1 |
| Achromobacter denitrificans | 2 |
| Achromobacter ruhlandii | 2 |
| Achromobacter sp. Quastel 52 | 1 |
| Achromobacter superficialis | 1 |
| Achromobacter xylosoxidans | 1 |
| Achromobacter xylosoxidans NCIMB 10751 | 3 |
| Acidaminococcus fermentans | 1 |
| Acidianus | 1 |
| Acidianus ambivalens | 6 |
| Acidianus brierleyi | 1 |
| Acidianus infernus | 1 |
| Acidianus sp. A1-3 | 1 |
| Acidianus tengchongensis | 1 |
| Acidilobus saccharovorans | 1 |
| Acidiphilium | 1 |
| Acidiphilium acidophilum | 5 |
| Acidipropionibacterium acidipropionici | 3 |
| Acidithiobacillus ferrooxidans | 14 |
| Acidithiobacillus thiooxidans | 6 |
| Acidothermus cellulolyticus 11B | 1 |
| Acidovorax avenae | 1 |
| Acidovorax citrulli | 3 |
| Acidovorax facilis | 2 |
| Acidovorax sp. JS42 | 2 |
| Acinetobacter | 2 |
| Acinetobacter baumannii | 2 |
| Acinetobacter baumannii ACICU | 1 |
| Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | 1 |
| Acinetobacter baumannii AYE | 1 |
| Acinetobacter baylyi ADP1 | 8 |
| Acinetobacter calcoaceticus | 9 |
| Acinetobacter calcoaceticus anitratus | 2 |
| Acinetobacter haemolyticus | 1 |
| Acinetobacter junii | 1 |
| Acinetobacter lwoffii | 1 |
| Acinetobacter lwoffii K24 | 1 |
| Acinetobacter sp. NCIMB9871 | 2 |
| Acinetobacter sp. SE19 | 1 |
| Acinetobacter sp. strain 20B | 1 |
| Acinetobacter sp. YAA | 1 |
| Acremonium chrysogenum | 3 |
| Actinidia | 1 |
| Actinidia chinensis | 3 |
| Actinidia deliciosa | 3 |
| Actinidia eriantha | 1 |
| Actinoalloteichus cyanogriseus | 3 |
| Actinobacillus succinogenes 130Z | 1 |
| Actinobacteria <actinobacteria> | 1 |
| Actinomadura | 1 |
| Actinomadura kijaniata | 1 |
| Actinomadura madurae | 1 |
| Actinomadura pelletieri | 1 |
| Actinomyces bovis | 2 |
| Actinomyces israelii | 1 |
| Actinomyces viscosus | 1 |
| Actinomycete S4 | 1 |
| Actinoplanes missouriensis | 1 |
| Actinoplanes utahensis | 1 |
| Actinopolyspora halophila | 2 |
| Actinosynnema mirum | 1 |
| Actinosynnema mirum DSM 43827 | 1 |
| Adiantum capillus-veneris | 2 |
| Adlercreutzia equolifaciens | 1 |
| Adonis aestivalis | 1 |
| Adonis aestivalis palaestina | 2 |
| Advenella mimigardefordensis | 2 |
| Advenella mimigardefordensis DPN7 | 1 |
| Aedes aegypti | 3 |
| Aequorea aequorea | 1 |
| Aequorea victoria | 1 |
| Aerococcus viridans | 3 |
| Aeromonas caviae | 6 |
| Aeromonas hydrophila | 8 |
| Aeromonas jandaei | 1 |
| Aeromonas salmonicida | 1 |
| Aeropyrum pernix | 6 |
| Aesculus | 1 |
| Afipia felis 15B1 | 1 |
| Afipia felis 25E1 | 1 |
| Afipia felis 25V | 1 |
| Agapanthus africanus | 4 |
| Agaricus bisporus | 1 |
| Aggregatibacter actinomycetemcomitans | 3 |
| Agrius cingulata | 1 |
| Agrobacterium | 1 |
| Agrobacterium aurantiacum | 1 |
| Agrobacterium fabrum C58 | 10 |
| Agrobacterium radiobacter K84 | 3 |
| Agrobacterium radiobacter S2 | 1 |
| Agrobacterium rhizogenes | 1 |
| Agrobacterium sp. 525a | 1 |
| Agrobacterium sp. DSM 8888 | 2 |
| Agrobacterium tumefaciens | 25 |
| Agrobacterium tumefaciens S33 | 1 |
| Agromyces mediolanus | 4 |
| Ajuga reptans | 1 |
| Alangium lamarckii | 1 |
| Albizia julibrissin | 1 |
| Albizia tanganyicensis | 1 |
| Alcaligenes faecalis | 8 |
| Alcaligenes faecalis KK314 | 1 |
| Alcaligenes faecalis M3A | 2 |
| Alcaligenes sp. CF8 | 1 |
| Alcaligenes sp. N-42 | 1 |
| Alcaligenes sp. O-1 | 4 |
| Alcaligenes sp. strain A175 | 1 |
| Alcaligenes sp. strain E1 | 1 |
| Alcaligenes sp. strain L6 | 1 |
| Alcaligenes sp. strain OBB65 | 1 |
| Alcaligenes sp. XY-234 | 1 |
| Alcaligenes viscolactis S-2 | 1 |
| Alexandrium tamarense | 1 |
| Algoriphagus sp. KK10202C | 1 |
| Alicycliphilus denitrificans | 2 |
| Aliivibrio fischeri | 4 |
| Aliivibrio salmonicida LFI1238 | 2 |
| Alistipes finegoldii | 1 |
| Alkaliphilus metalliredigens | 1 |
| Alkaliphilus oremlandii | 1 |
| Allium aflatunense | 2 |
| Allium altaicum | 2 |
| Allium altyncolicum | 2 |
| Allium ampeloprasum | 3 |
| Allium ascalonicum | 2 |
| Allium cepa | 9 |
| Allium cepa aggregatum | 1 |
| Allium chinense | 2 |
| Allium fistulosum | 1 |
| Allium nutans | 1 |
| Allium ochotense | 2 |
| Allium sativum | 3 |
| Allium schoenoprasum | 1 |
| Allium siculum | 1 |
| Allium tuberosum | 1 |
| Allium ursinum | 1 |
| Allium victorialis | 2 |
| Allochromatium vinosum | 15 |
| Aloe arborescens | 4 |
| Aloe ferox | 1 |
| Alternaria brassicicola ATCC 96836 | 1 |
| Alternaria solani | 1 |
| Alteromonas macleodii | 1 |
| Alteromonas sp. ATCC 43554 | 1 |
| Amanita muscaria | 5 |
| Amaranthus hybridus cruentus | 1 |
| Amaranthus hypochondriacus | 1 |
| Amauroascus aureus | 1 |
| Ambrosiozyma llanquihuensis | 1 |
| Aminobacter aminovorans | 4 |
| Aminobacter ciceronei | 1 |
| Ammi majus | 1 |
| Ammonifex degensii | 1 |
| Amorpha fruticosa | 2 |
| Amycolatopsis lactamdurans | 3 |
| Amycolatopsis mediterranei | 4 |
| Amycolatopsis mediterranei U32 | 1 |
| Amycolatopsis methanolica | 2 |
| Amycolatopsis orientalis | 1 |
| Amycolatopsis sp. ATCC 39116 | 1 |
| Amycolatopsis sp. HR167 | 1 |
| Amylomyces rouxii | 1 |
| Anabaena bergii | 1 |
| Anabaena sp. 90 | 1 |
| Anaerobacillus arseniciselenatis | 1 |
| Anaeromusa acidaminophila | 1 |
| Anaerotignum propionicum | 4 |
| Anaerotruncus colihominis | 1 |
| Anaerovibrio lipolyticus | 1 |
| Ananas comosus | 1 |
| Anchusa officinalis | 2 |
| Ancylobacter aquaticus | 1 |
| Ancylobacter vacuolatus | 1 |
| Anemone leveillei | 2 |
| Aneurinibacillus migulanus | 1 |
| Aneurinibacillus thermoaerophilus | 1 |
| Aneurinibacillus thermoaerophilus L420-91 | 2 |
| Anigozanthos preissii | 1 |
| Anisodus acutangulus | 1 |
| Annwoodia aquaesulis | 2 |
| Anolis carolinensis | 1 |
| Anthracobia melaloma | 1 |
| Anthriscus sylvestris | 2 |
| Antirrhinum majus | 2 |
| Apantesis nevadensis geneura | 1 |
| Aphanizomenon flos-aquae | 2 |
| Aphanoascus verrucosus | 1 |
| Aphanocapsa | 1 |
| Aphanothece halophytica | 3 |
| Aphelandra squarrosa | 2 |
| Apinisia graminicola | 1 |
| Apis mellifera | 3 |
| Apium graveolens | 2 |
| Aplysia californica | 1 |
| Aquatica lateralis | 1 |
| Aquifex aeolicus | 10 |
| Aquifex aeolicus VF5 | 2 |
| Aquifex pyrophilus | 2 |
| Aquilaria crassna | 1 |
| Aquilegia vulgaris | 1 |
| Aquincola tertiaricarbonis | 1 |
| Arabella iricolor | 1 |
| Arabidopsis | 2 |
| Arabidopsis lyrata | 2 |
| Arabidopsis thaliana | 15 |
| Arabidopsis thaliana col | 346 |
| Arabidopsis thaliana Cvi | 3 |
| Arabidopsis thaliana ler | 4 |
| Arabidopsis thaliana Ws | 1 |
| Arachis hypogaea | 1 |
| Arachnomyces minimus | 1 |
| Arachnotheca glomerata | 1 |
| Archaea | 2 |
| Archaeoglobus fulgidus | 13 |
| Archaeoglobus fulgidus 7324 | 2 |
| Archaeoglobus profundus | 1 |
| Arctia caja | 1 |
| Arenicola marina | 2 |
| Arenimonas malthae | 1 |
| Argemone mexicana | 2 |
| Armillaria gallica | 1 |
| Armillaria mellea | 1 |
| Aromatoleum aromaticum EbN1 | 3 |
| Aromatoleum bremense | 1 |
| Aromatoleum evansii | 5 |
| Aromatoleum toluolicum | 2 |
| arsenite-oxidizing bacterium NT-14 | 1 |
| Artemisia annua | 7 |
| Arthrobacter | 1 |
| Arthrobacter agilis | 1 |
| Arthrobacter aurescens TW17 | 1 |
| Arthrobacter citreus | 3 |
| Arthrobacter crystallopoietes | 3 |
| Arthrobacter globiformis | 8 |
| Arthrobacter globiformis KZT1 | 1 |
| Arthrobacter methylotrophus | 2 |
| Arthrobacter pascens | 1 |
| Arthrobacter protophormiae R4 | 1 |
| Arthrobacter protophormiae RKJ100 | 1 |
| Arthrobacter ramosus | 1 |
| Arthrobacter sp | 4 |
| Arthrobacter sp. 4-CB1 | 1 |
| Arthrobacter sp. 9759 | 1 |
| Arthrobacter sp. KI72 | 1 |
| Arthrobacter sp. KUJ8602 | 1 |
| Arthrobacter sp. Q36 | 1 |
| Arthrobacter sp. SLBN-53 | 1 |
| Arthrobacter sp. SU | 1 |
| Arthrobacter sp. TE1826 | 1 |
| Arthrobacter sp. TM1 | 1 |
| Arthrobacter sp. TMP-1 | 1 |
| Arthrobacter synephrinum | 1 |
| Arthroderma borellii | 1 |
| Arthroderma curreyi | 1 |
| Arthroderma quadrifidum | 1 |
| Arthrodermataceae | 1 |
| Arthrospira platensis | 4 |
| Asaccharobacter celatus AHU1763 | 1 |
| Asanoa ferruginea | 1 |
| Ascaris lumbricoides | 3 |
| Ascaris suum | 3 |
| Asclepias syriaca | 2 |
| Ascochyta rabiei | 1 |
| Ascosphaera | 1 |
| Ascosphaera apis | 1 |
| Ascosphaera asterophora | 1 |
| Ascosphaera atra | 1 |
| Ascosphaera major | 1 |
| Ascosphaera proliperda | 1 |
| Asparagus officinalis | 2 |
| Aspergillus | 1 |
| Aspergillus aculeatus | 3 |
| Aspergillus alliaceus | 1 |
| Aspergillus awamori | 2 |
| Aspergillus carbonarius | 1 |
| Aspergillus carneus | 1 |
| Aspergillus cejpii | 1 |
| Aspergillus clavatus | 1 |
| Aspergillus clavatus NRRL 1980 | 1 |
| Aspergillus fischeri | 3 |
| Aspergillus fischeri NRRL 181 | 1 |
| Aspergillus flavus | 8 |
| Aspergillus flavus NRRL3357 | 1 |
| Aspergillus fumigatus | 10 |
| Aspergillus itaconicus | 1 |
| Aspergillus japonicus | 2 |
| Aspergillus nidulans | 16 |
| Aspergillus niger | 20 |
| Aspergillus niger ATCC 1015 | 2 |
| Aspergillus ochraceus | 1 |
| Aspergillus oryzae | 6 |
| Aspergillus parasiticus | 5 |
| Aspergillus quadricinctus | 1 |
| Aspergillus rugulosus | 3 |
| Aspergillus sp. MF297-2 | 2 |
| Aspergillus stellatus | 2 |
| Aspergillus steynii | 1 |
| Aspergillus sydowii | 1 |
| Aspergillus terreus | 5 |
| Aspergillus terricola | 2 |
| Aspergillus tubingensis | 1 |
| Aspergillus versicolor | 3 |
| Aspergillus westerdijkiae | 1 |
| Astacus leptodactylus | 1 |
| Asterias rubens | 1 |
| Astragalus | 2 |
| Astragalus bisulcatus | 2 |
| Astragalus mongholicus | 2 |
| Atopobium rimae | 1 |
| Atractylodes lancea | 1 |
| Atropa belladonna | 4 |
| Aurantimonas manganoxydans SI85-9A1 | 2 |
| Aureispira marina | 1 |
| Aureobasidium pullulans | 2 |
| Aureococcus anophagefferens | 1 |
| Auxenochlorella pyrenoidosa | 1 |
| Avena sativa | 6 |
| Avena strigosa | 7 |
| Aves | 3 |
| Azoarcus sp. EB1 | 1 |
| Azorhizobium caulinodans | 1 |
| Azospira oryzae | 1 |
| Azospira sp. KJ | 1 |
| Azospira sp. PCC | 1 |
| Azospirillum brasilense | 8 |
| Azospirillum lipoferum | 2 |
| Azospirillum sp. TTI | 1 |
| Azotobacter beijerinckii | 1 |
| Azotobacter chroococcum | 1 |
| Azotobacter vinelandii | 15 |
| Azotobacter vinelandii NBRC 102612 | 1 |
| Bacillariophyta | 1 |
| Bacillus alcalophilus | 2 |
| Bacillus amyloliquefaciens | 2 |
| Bacillus amyloliquefaciens 140N | 1 |
| Bacillus anthracis | 7 |
| Bacillus anthracis Sterne | 1 |
| Bacillus atrophaeus 1942 | 1 |
| Bacillus azotoformans | 1 |
| Bacillus badius | 2 |
| Bacillus bataviensis | 1 |
| Bacillus brevis Nagano | 1 |
| Bacillus cereus | 12 |
| Bacillus cereus ATCC 14579 | 1 |
| Bacillus cereus G9241 | 1 |
| Bacillus cereus PF-11 | 1 |
| Bacillus circulans | 6 |
| Bacillus clausii KSM-K16 | 1 |
| Bacillus coagulans | 2 |
| Bacillus fastidiosus | 1 |
| Bacillus firmus | 2 |
| Bacillus halodurans | 1 |
| Bacillus halodurans C-125 | 1 |
| Bacillus halotolerans | 2 |
| Bacillus lentus | 2 |
| Bacillus licheniformis | 7 |
| Bacillus megaterium | 12 |
| Bacillus methanolicus | 3 |
| Bacillus mycoides | 1 |
| Bacillus nealsonii | 1 |
| Bacillus niacini | 1 |
| Bacillus psychrosaccharolyticus | 2 |
| Bacillus pumilus | 5 |
| Bacillus pumilus WH4 | 1 |
| Bacillus racemilacticus | 2 |
| Bacillus smithii | 1 |
| Bacillus sp. 8 | 1 |
| Bacillus sp. GL1 | 1 |
| Bacillus sp. HYS-1 | 1 |
| Bacillus sp. No. 230 | 1 |
| Bacillus sp. OxB-1 | 1 |
| Bacillus sp. PL-12 | 1 |
| Bacillus sp. RC607 | 1 |
| Bacillus sp. SG-1 | 1 |
| Bacillus stearothermophilus BR388 | 1 |
| Bacillus subtilis | 63 |
| Bacillus subtilis natto | 1 |
| Bacillus subtilis spizizenii ATCC 6633 | 1 |
| Bacillus subtilis spizizenii W23 | 2 |
| Bacillus subtilis subtilis 168 | 44 |
| Bacillus thuringiensis | 5 |
| Bacillus thuringiensis [] serovar konkukian str. 97-27 | 1 |
| Bacillus velezensis FZB42 | 1 |
| bacterium | 1 |
| bacterium enrichment culture clone N47 | 1 |
| Bacteroidales bacterium Barb6XT | 1 |
| Bacteroides | 1 |
| Bacteroides eggerthii | 4 |
| Bacteroides fragilis | 10 |
| Bacteroides fragilis ATCC 23745 | 1 |
| Bacteroides fragilis NCTC 9343 | 4 |
| Bacteroides helcogenes | 1 |
| Bacteroides ovatus | 4 |
| Bacteroides salanitronis | 1 |
| Bacteroides sp. DeMoss 69 | 1 |
| Bacteroides thetaiotaomicron | 9 |
| Bacteroides thetaiotaomicron VPI-5482 | 2 |
| Bacteroides vulgatus | 9 |
| Bacteroides vulgatus ATCC 8482 | 3 |
| Balansia obtecta | 1 |
| Barnadesia spinosa | 1 |
| Barnettozyma californica | 1 |
| Barnettozyma pratensis | 1 |
| Batis maritima | 1 |
| Beauveria bassiana | 2 |
| Beggiatoa | 1 |
| Bemisia tabaci | 1 |
| Berberis | 1 |
| Berberis beaniana | 1 |
| Berberis stolonifera | 2 |
| Berberis wilsoniae | 3 |
| Beta vulgaris | 2 |
| Beta vulgaris vulgaris | 2 |
| Betula | 1 |
| Betula platyphylla japonica | 2 |
| Betula pubescens | 1 |
| Bifidobacterium adolescentis | 2 |
| Bifidobacterium animalis lactis | 2 |
| Bifidobacterium bifidum | 2 |
| Bifidobacterium longum | 3 |
| Bifidobacterium longum SBT2928 | 4 |
| Bifidobacterium tissieri | 1 |
| Bilophila wadsworthia | 1 |
| Bilophila wadsworthia 3_1_6 | 1 |
| Bilophila wadsworthia RZATAU | 4 |
| Bixa orellana | 2 |
| Blaberus discoidalis | 1 |
| Blaberus giganteus | 1 |
| Blastochloris viridis | 4 |
| Blatta orientalis | 1 |
| Blautia hydrogenotrophica DSM 10507 | 1 |
| Blautia producta | 2 |
| Blautia producta K 2/25.1 | 1 |
| Blighia sapida | 1 |
| Bombyx mori | 4 |
| Borago officinalis | 1 |
| Bordetella bronchiseptica | 1 |
| Bordetella bronchiseptica RB50 | 1 |
| Bordetella parapertussis | 1 |
| Bordetella pertussis | 9 |
| Bordetella sp. 10d | 2 |
| Borreliella burgdorferi | 2 |
| Bos taurus | 24 |
| Botryococcus braunii | 2 |
| Botryococcus braunii BOT22 | 1 |
| Botryococcus braunii BOT88-2 | 1 |
| Botryococcus braunii race L | 1 |
| Botrytis cinerea | 4 |
| Brachybacterium conglomeratum | 1 |
| Brachymonas petroleovorans CHX | 1 |
| Bradyrhizobium diazoefficiens | 1 |
| Bradyrhizobium diazoefficiens USDA 110 | 1 |
| Bradyrhizobium elkanii | 3 |
| Bradyrhizobium japonicum | 13 |
| Bradyrhizobium sp. JS329 | 1 |
| Bradyrhizobium sp. RD5-C2 | 3 |
| Bradyrhizobium sp. SEMIA 6144 | 1 |
| Brassica juncea | 5 |
| Brassica napus | 18 |
| Brassica nigra | 1 |
| Brassica oleracea | 3 |
| Brassica oleracea botrytis | 2 |
| Brassica oleracea italica | 1 |
| Brassica rapa | 2 |
| Brevibacillus agri | 2 |
| Brevibacillus brevis S1 | 4 |
| Brevibacillus laterosporus | 1 |
| Brevibacterium | 1 |
| Brevibacterium epidermidis | 1 |
| Brevibacterium fuscum | 3 |
| Brevibacterium helvolum | 3 |
| Brevibacterium iodinum | 1 |
| Brevibacterium linens | 2 |
| Brevibacterium sp. DPO 1361 | 1 |
| Brevibacterium sterolicum | 1 |
| Brevundimonas aurantiaca | 1 |
| Brevundimonas diminuta | 1 |
| Brevundimonas sp. SD212 | 2 |
| Brevundimonas vesicularis | 2 |
| Brochothrix thermosphacta | 2 |
| Bromus inermis | 1 |
| Brucella abortus | 6 |
| Brucella melitensis | 5 |
| Bruguiera gymnorhiza | 2 |
| Burkholderia ambifaria AMMD | 1 |
| Burkholderia cenocepacia | 1 |
| Burkholderia cenocepacia J2315 | 3 |
| Burkholderia cepacia | 12 |
| Burkholderia cepacia 2CBS | 1 |
| Burkholderia cepacia complex | 1 |
| Burkholderia cepacia JS850 | 1 |
| Burkholderia cepacia R34 | 1 |
| Burkholderia gladioli | 2 |
| Burkholderia glumae | 3 |
| Burkholderia lata | 2 |
| Burkholderia mallei | 1 |
| Burkholderia plantarii | 2 |
| Burkholderia pseudomallei | 3 |
| Burkholderia pyrrocinia | 2 |
| Burkholderia sp. AK-5 | 1 |
| Burkholderia sp. DNT | 1 |
| Burkholderia sp. FA1 | 1 |
| Burkholderia sp. JB1 | 1 |
| Burkholderia sp. JS150 | 1 |
| Burkholderia sp. JS667 | 2 |
| Burkholderia sp. NK8 | 1 |
| Burkholderia sp. RASC | 3 |
| Burkholderia sp. WS | 2 |
| Burkholderia terrae KU-15 | 2 |
| Burkholderia thailandensis | 3 |
| Busycotypus canaliculatus | 1 |
| Butyrivibrio fibrisolvens | 1 |
| Byrsotria fumigata | 1 |
| Cadra cautella | 1 |
| Caenorhabditis elegans | 4 |
| Caldanaerobacter subterraneus tengcongensis | 3 |
| Caldicellulosiruptor saccharolyticus | 1 |
| Caldisphaera lagunensis | 1 |
| Caldivirga maquilingensis | 1 |
| Calendula officinalis | 2 |
| Camellia irrawadiensis | 2 |
| Camellia ptilophylla | 3 |
| Camellia sinensis | 11 |
| Camellia sinensis assamica | 3 |
| Camellia sinensis sinensis | 1 |
| Camellia taliensis | 1 |
| Camptotheca acuminata | 2 |
| Campylobacter coli | 3 |
| Campylobacter fetus | 1 |
| Campylobacter jejuni | 14 |
| Campylobacter jejuni jejuni 81-176 | 1 |
| Campylobacter jejuni jejuni 81116 | 2 |
| Campylobacter jejuni jejuni NCTC 11168 = ATCC 700819 | 3 |
| Canavalia ensiformis | 2 |
| Canavalia lineata | 2 |
| Candida albicans | 4 |
| Candida albicans SC5314 | 1 |
| Candida cariosilignicola | 1 |
| Candida cloacae | 1 |
| Candida entomophila | 1 |
| Candida freyschussii | 1 |
| Candida karawaiewii | 1 |
| Candida maltosa | 2 |
| Candida maltosa L4 | 1 |
| Candida methylica | 1 |
| Candida sequanensis | 1 |
| Candida silvanorum | 1 |
| Candida solani | 1 |
| Candida tropicalis | 2 |
| Candidatus Anammoxoglobus | 1 |
| Candidatus Arcobacter sulfidicus | 1 |
| Candidatus Brocadia anammoxidans | 1 |
| Candidatus Endobugula sertula | 1 |
| Candidatus Jettenia caeni | 1 |
| Candidatus Korarchaeum cryptofilum | 1 |
| Candidatus Kuenenia stuttgartiensis | 1 |
| Candidatus Methanomassiliicoccus intestinalis | 1 |
| Candidatus Methanoplasma termitum | 1 |
| Candidatus Methylomirabilis oxyfera | 2 |
| Candidatus Nitrosopelagicus brevis | 1 |
| Candidatus Nitrososphaera gargensis | 1 |
| Candidatus Nitrososphaera gargensis Ga9.2 | 2 |
| Candidatus Pelagibacter ubique | 2 |
| Candidatus Pelagibacter ubique HTCC1062 | 1 |
| Candidatus Scalindua brodae | 1 |
| Candidatus Scalindua wagneri | 1 |
| Candidatus Thiodictyon syntrophicum Cad16 | 1 |
| Canis lupus familiaris | 1 |
| Cannabis sativa | 5 |
| Cantharellus formosus | 1 |
| Capnocytophaga gingivalis | 2 |
| Capnocytophaga ochracea | 2 |
| Capnocytophaga sputigena | 2 |
| Capra hircus | 3 |
| Capsicum annuum | 11 |
| Capsicum baccatum | 1 |
| Capsicum chinense | 2 |
| Capsicum frutescens | 1 |
| Carapichea ipecacuanha | 1 |
| Carassius auratus | 1 |
| Carboxydothermus hydrogenoformans | 1 |
| Carcinus maenas | 1 |
| Carica papaya | 1 |
| Carthamus tinctorius | 8 |
| Carum carvi | 1 |
| Caryophyllaceae | 1 |
| Caryophyllales | 1 |
| Cassia coluteoides | 1 |
| Castellaniella defragrans | 2 |
| Castellaniella denitrificans | 2 |
| Catharanthus roseus | 30 |
| Caulobacter vibrioides | 1 |
| Caulobacter vibrioides CB15 | 3 |
| Caulobacter vibrioides NA1000 | 2 |
| Cavia porcellus | 8 |
| Cellana grata | 1 |
| Cellulomonas biazotea | 2 |
| Cellulomonas fimi | 1 |
| Cellulomonas flavigena | 1 |
| Cellulosimicrobium cellulans | 1 |
| Celosia cristata | 2 |
| Cenarchaeum symbiosum | 1 |
| Centaurium erythraea | 1 |
| Cephalocereus senilis | 1 |
| Cerastium arvense | 1 |
| Ceratodon purpureus | 1 |
| Cestrum elegans | 1 |
| Chaetomium globosum | 1 |
| Chamaecyparis obtusa | 1 |
| Chelatococcus asaccharovorans | 1 |
| Chelidonium majus | 1 |
| Chlamydia abortus | 2 |
| Chlamydia caviae | 2 |
| Chlamydia felis | 2 |
| Chlamydia muridarum | 2 |
| Chlamydia pneumoniae | 3 |
| Chlamydia psittaci | 1 |
| Chlamydia trachomatis | 9 |
| Chlamydia trachomatis D/UW-3/CX | 1 |
| Chlamydomonas | 1 |
| Chlamydomonas reinhardtii | 21 |
| Chlorella sp. (Roon 68) | 2 |
| Chlorobaculum limnaeum | 3 |
| Chlorobaculum tepidum | 13 |
| Chlorobaculum tepidum TLS | 2 |
| Chlorobaculum thiosulfatiphilum | 4 |
| Chlorobium | 1 |
| Chlorobium limicola | 6 |
| Chlorobium phaeobacteroides BS1 | 3 |
| Chlorobium phaeobacteroides DSM 266 | 3 |
| Chlorobium phaeovibrioides DSM 265 | 1 |
| Chloroflexus aggregans | 1 |
| Chloroflexus aurantiacus | 2 |
| Chloroflexus aurantiacus J-10-fl | 2 |
| Chlorogloeopsis fritschii | 1 |
| Chlorophyta | 1 |
| Chondromyces apiculatus | 1 |
| Chondrus crispus | 1 |
| Chromatium | 1 |
| chromatium vinosum strain D | 1 |
| Chromobacterium violaceum | 7 |
| Chromobacterium violaceum ATCC 12472 | 1 |
| Chromohalobacter beijerinckii | 3 |
| Chromohalobacter salexigens | 3 |
| Chromohalobacter salexigens DSM 3043 | 4 |
| Chrysanthemum x morifolium | 1 |
| Chrysiogenes arsenatis | 1 |
| Chrysopa | 1 |
| Chrysosplenium americanum | 4 |
| Chrysosporium keratinophilum | 1 |
| Chrysosporium lucknowense | 1 |
| Chrysosporum ovalisporum | 1 |
| Cicer arietinum | 14 |
| Cichorium intybus | 4 |
| Cinchona | 1 |
| Cinchona calisaya | 1 |
| Cinchona macrocalyx | 1 |
| Cinchona mutisii | 1 |
| Cinchona officinalis | 1 |
| Cinchona pitayensis | 1 |
| Cinchona pubescens | 1 |
| Cinnamomum tenuipile | 1 |
| Cistus creticus | 2 |
| Citeromyces matritensis | 1 |
| Citrobacter amalonaticus | 2 |
| Citrobacter freundii | 10 |
| Citrobacter intermedius | 1 |
| Citrobacter sp. S-77 | 1 |
| Citrullus lanatus vulgaris | 1 |
| Citrus aurantium | 2 |
| Citrus clementina | 1 |
| Citrus hanaju | 1 |
| Citrus japonica | 2 |
| Citrus junos | 1 |
| Citrus maxima | 4 |
| Citrus sinensis | 5 |
| Citrus trifoliata | 1 |
| Citrus unshiu | 3 |
| Citrus x microcarpa | 1 |
| Citrus x paradisi | 5 |
| Cladophora | 1 |
| Cladosporium cladosporioides | 1 |
| Clarkia breweri | 6 |
| Clavibacter michiganensis | 3 |
| Clavibacter michiganensis insidiosus | 3 |
| Clavibacter michiganensis michiganensis | 1 |
| Clavibacter michiganensis nebraskensis | 3 |
| Clavibacter michiganensis sepedonicus | 3 |
| Claviceps fusiformis | 1 |
| Claviceps purpurea | 2 |
| Clavispora fructus | 1 |
| Clavispora lusitaniae | 1 |
| Cleretum bellidiforme | 1 |
| Clitoria ternatea | 2 |
| Clostridioides difficile | 4 |
| Clostridioides difficile 630 | 1 |
| Clostridioides difficile ATCC 9689 = DSM 1296 | 1 |
| Clostridioides difficile CD196 | 1 |
| Clostridium | 3 |
| Clostridium aceticum | 1 |
| Clostridium acetobutylicum | 15 |
| Clostridium acetobutylicum ATCC 824 | 10 |
| Clostridium aminobutyricum | 1 |
| Clostridium beijerinckii | 7 |
| Clostridium bifermentans DPH-1 | 1 |
| Clostridium botulinum | 9 |
| Clostridium botulinum A str. ATCC 19397 | 2 |
| Clostridium butyricum | 3 |
| Clostridium cellulovorans | 2 |
| Clostridium cochlearium | 2 |
| Clostridium colicanis | 1 |
| Clostridium cylindrosporum | 2 |
| Clostridium formicaceticum | 4 |
| Clostridium innocuum D1144/3 | 1 |
| Clostridium kluyveri | 5 |
| Clostridium magnum | 1 |
| Clostridium malenominatum | 1 |
| Clostridium paraputrificum D 762-06 | 1 |
| Clostridium pasteurianum | 10 |
| Clostridium peptidivorans | 1 |
| Clostridium perfringens | 7 |
| Clostridium perfringens 13 | 2 |
| Clostridium perfringens A99 | 1 |
| Clostridium saccharobutylicum | 4 |
| Clostridium sardiniense | 1 |
| Clostridium SB4 | 1 |
| Clostridium sp. ATCC 29733 | 1 |
| Clostridium sp. TO-931 | 3 |
| Clostridium sporogenes | 11 |
| Clostridium subterminale | 1 |
| Clostridium tetani | 2 |
| Clostridium tetanomorphum | 4 |
| Clostridium ventriculi | 1 |
| Coccinella | 1 |
| Coffea abeokutae | 1 |
| Coffea arabica | 4 |
| Coffea canephora | 2 |
| Coffea eugenioides | 1 |
| Coffea liberica | 1 |
| Coffea liberica dewevrei | 1 |
| Coix lacryma-jobi | 2 |
| Colchicum autumnale | 1 |
| Collimonas sp. CT | 1 |
| Collinsella tanakaei | 1 |
| Colwellia psychrerythraea 34H | 1 |
| Comamonas sp. E6 | 1 |
| Comamonas sp. JS765 | 3 |
| Comamonas testosteroni | 8 |
| Comamonas testosteroni 63 | 1 |
| Comamonas testosteroni CNB-1 | 2 |
| Comamonas testosteroni JH5 | 1 |
| Comamonas testosteroni KF-1 | 1 |
| Comamonas testosteroni T-2 | 3 |
| Comamonas testosteroni TA441 | 2 |
| Coniochaeta ligniaria | 1 |
| Conium maculatum | 1 |
| Consolida orientalis | 1 |
| Coptis chinensis | 2 |
| Coptis japonica | 6 |
| Coptis japonica dissecta | 1 |
| Coptis teeta | 1 |
| Coraliomargarita akajimensis DSM 45221 | 1 |
| Corallococcus coralloides | 2 |
| Corbicula japonica | 1 |
| Coreopsis grandiflora | 2 |
| Coriandrum sativum | 1 |
| Corydalis cava | 1 |
| Corydalis saxicola | 1 |
| Corydalis vaginans | 2 |
| Corynebacterium ammoniagenes | 1 |
| Corynebacterium bovis | 1 |
| Corynebacterium callunae | 1 |
| Corynebacterium diphtheriae | 6 |
| Corynebacterium flavescens | 3 |
| Corynebacterium glutamicum | 21 |
| Corynebacterium glutamicum ATCC 13032 | 14 |
| Corynebacterium glutamicum R | 2 |
| Corynebacterium kutscheri | 1 |
| Corynebacterium matruchotii | 1 |
| Corynebacterium nephridii | 1 |
| Corynebacterium pseudotuberculosis | 1 |
| Corynebacterium renale | 1 |
| Corynebacterium sp | 2 |
| Corynebacterium sp. B6 | 1 |
| Corynebacterium sp. SHS 0007 | 1 |
| Corynebacterium sp. strain SY1 | 1 |
| Corynebacterium stationis | 1 |
| Corynebacterium ulcerans | 1 |
| Corynebacterium variabile | 1 |
| Corynebacterium xerosis | 1 |
| Crambe hispanica abyssinica | 1 |
| Crassostrea gigas | 3 |
| Crepis alpina | 1 |
| Crepis palaestina | 1 |
| Crithidia fasciculata | 3 |
| Crocosphaera subtropica ATCC 51142 | 3 |
| Crocus sativus | 3 |
| Croton | 1 |
| Croton linearis | 1 |
| Croton stellatopilosus | 2 |
| Croton sublyratus | 1 |
| Crypthecodinium cohnii | 1 |
| Cryptobacterium sp. CAG:338 | 1 |
| Cryptococcus albidus IFO 0939 | 1 |
| Cryptomeria japonica | 2 |
| Cryptosporidium parvum | 2 |
| Ctenomyces serratus | 1 |
| Cucumis melo | 5 |
| Cucumis sativus | 17 |
| Cucurbita maxima | 4 |
| Cucurbita pepo | 1 |
| Cucurbita pepo Early Prolific Straightneck | 1 |
| Cucurbita pepo medullosa | 1 |
| Cuphea wrightii | 1 |
| Cupressus | 1 |
| Cupriavidus basilensis | 2 |
| Cupriavidus metallidurans | 1 |
| Cupriavidus metallidurans CH34 | 4 |
| Cupriavidus nantongensis | 2 |
| Cupriavidus necator | 17 |
| Cupriavidus necator H16 | 9 |
| Cupriavidus necator N-1 | 1 |
| Cupriavidus oxalaticus | 1 |
| Cupriavidus pinatubonensis JMP134 | 11 |
| Cupriavidus sp. DT-1 | 1 |
| Cupriavidus sp. PS12 | 15 |
| Cupriavidus sp. WS | 1 |
| Curcuma longa | 3 |
| Curtobacterium albidum | 3 |
| Curtobacterium citreum | 3 |
| Curtobacterium flaccumfaciens | 4 |
| Curtobacterium luteum | 3 |
| Cutaneotrichosporon cutaneum | 4 |
| Cutaneotrichosporon moniliiforme | 1 |
| Cutibacterium acnes | 5 |
| Cyanidioschyzon merolae strain 10D | 1 |
| Cyanidium caldarium | 3 |
| Cyanobium gracile PCC 6307 | 1 |
| Cyanothece sp. PCC 7425 | 2 |
| Cyberlindnera jadinii | 6 |
| Cyberlindnera mrakii | 2 |
| Cyberlindnera saturnus | 2 |
| Cyclotella meneghiniana | 2 |
| Cydia pomonella | 1 |
| Cylindrocarpon didymum | 1 |
| Cylindrospermopsis raciborskii AWT205 | 1 |
| Cymbopogon flexuosus | 1 |
| Cymbopogon martinii | 1 |
| Cyperus iria | 1 |
| Cystobacter fuscus | 1 |
| Cytophaga hutchinsonii | 2 |
| Dahlia pinnata | 5 |
| Dalbergia cochinchinensis | 1 |
| Dalbergia nigrescens | 1 |
| Danio rerio | 3 |
| Daphne odora | 2 |
| Datura inoxia | 1 |
| Datura stramonium | 4 |
| Daucus carota | 9 |
| Davallia trichomanoides | 1 |
| Debaryomyces hansenii CBS767 | 1 |
| Dechloromonas agitata | 1 |
| Dechloromonas aromatica | 2 |
| Dechloromonas sp. MissR | 1 |
| Dechloromonas sp. PC1 | 1 |
| Dehalobacter restrictus | 1 |
| Dehalococcoides mccartyi | 2 |
| Dehalococcoides mccartyi VS | 1 |
| Deinococcus radiodurans | 11 |
| Deinococcus radiodurans R1 | 1 |
| Deinococcus radiophilus | 1 |
| Delftia acidovorans | 18 |
| Delftia acidovorans 7N | 1 |
| Delftia sp. AN3 | 1 |
| Delftia tsuruhatensis AD9 | 1 |
| Delphinium grandiflorum | 5 |
| delta proteobacterium N47 | 1 |
| Dermatophilus congolensis | 3 |
| Derris elliptica | 1 |
| Desmodium uncinatum | 2 |
| Desmonostoc muscorum | 2 |
| Desulfallas geothermicus | 1 |
| Desulfallas gibsoniae DSM 7213 | 1 |
| Desulfatibacillum alkenivorans AK-01 | 1 |
| Desulfitobacterium chlororespirans | 1 |
| Desulfitobacterium dehalogenans | 1 |
| Desulfitobacterium hafniense | 2 |
| Desulfitobacterium hafniense DCB-2 | 1 |
| Desulfitobacterium hafniense Y51 | 2 |
| Desulfobacter hydrogenophilus | 1 |
| Desulfobacterium autotrophicum | 3 |
| Desulfobacterium niacini | 1 |
| Desulfobacterium sp. PM4 | 1 |
| Desulfobacterium vacuolatum | 1 |
| Desulfobulbus | 1 |
| Desulfobulbus propionicus | 3 |
| Desulfocapsa | 1 |
| Desulfocapsa sulfexigens | 2 |
| Desulfocapsa sulfexigens DSM 10523 | 1 |
| Desulfocapsa thiozymogenes | 1 |
| Desulfococcus biacutus | 1 |
| Desulfofarcimen acetoxidans DSM 771 | 1 |
| Desulfofundulus australicus | 1 |
| Desulfofundulus kuznetsovii | 1 |
| Desulfofundulus kuznetsovii DSM 6115 | 1 |
| Desulfomicrobium baculatum | 1 |
| Desulfonispora thiosulfatigenes GKNTAU | 2 |
| Desulfosarcina cetonica | 1 |
| Desulfosporosinus acidiphilus | 1 |
| Desulfosporosinus acidiphilus SJ4 | 1 |
| Desulfosporosinus orientis DSM 765 | 1 |
| Desulfosporosinus youngiae | 1 |
| Desulfotomaculum nigrificans | 6 |
| Desulfovibrio alaskensis G20 | 2 |
| Desulfovibrio desulfuricans | 9 |
| Desulfovibrio desulfuricans DSM 642 | 1 |
| Desulfovibrio fairfieldensis | 1 |
| Desulfovibrio fructosivorans | 1 |
| Desulfovibrio gigas | 6 |
| Desulfovibrio multispirans | 2 |
| Desulfovibrio piger | 1 |
| Desulfovibrio sulfodismutans | 2 |
| Desulfovibrio termitidis | 1 |
| Desulfovibrio vulgaris | 8 |
| Desulfovibrio vulgaris Hildenborough | 1 |
| Desulfovibrio vulgaris Miyazaki F | 1 |
| Desulfurivibrio alkaliphilus AHT 2 | 1 |
| Desulfurobacterium thermolithotrophum | 1 |
| Desulfurococcus amylolyticus | 1 |
| Desulfurococcus mucosus | 1 |
| Desulfuromonas acetexigens | 1 |
| Desulfuromonas acetoxidans | 2 |
| Desulfuromonas acetoxidans DSM 684 | 1 |
| Diacrisia sannio | 1 |
| Dianthus caryophyllus | 12 |
| Diaporthe amygdali | 3 |
| Dickeya chrysanthemi | 5 |
| Dickeya dadantii | 1 |
| Dickeya dadantii 3937 | 3 |
| Dicranum scoparium | 1 |
| Dictyocaulus viviparus | 1 |
| Dictyostelium discoideum | 4 |
| Dietzia sp. CQ4 | 1 |
| Digenea simplex | 1 |
| Digitalis grandiflora | 1 |
| Digitalis lanata | 2 |
| Digitalis purpurea | 2 |
| Dimorphandra mollis | 1 |
| Dimorphotheca sinuata | 1 |
| Dinoroseobacter shibae DFL 12 = DSM 16493 | 1 |
| Diospyros kaki | 1 |
| Diploptera punctata | 1 |
| Diutina catenulata | 1 |
| Diutina rugosa | 1 |
| Dolichandra unguis-cati | 1 |
| Domibacillus aminovorans | 2 |
| Dorea longicatena | 1 |
| Doryteuthis pealeii | 1 |
| Drosophila <flies,genus> | 1 |
| Drosophila melanogaster | 12 |
| Dryopteris crassirhizoma | 1 |
| DSMP-degrading bacterium LFR | 1 |
| Duganella sp. B2 | 1 |
| Dugesia japonica | 1 |
| Ectocarpus siliculosus | 2 |
| Ectothiorhodospira haloalkaliphila | 1 |
| Ectothiorhodospira shaposhnikovii | 1 |
| Edwardsiella tarda | 2 |
| Eggerthella lenta | 1 |
| Eggerthella lenta A2 | 1 |
| Eggerthella lenta DSM 2243 | 5 |
| Eggerthella sp. CAG:298 | 1 |
| Eimeria | 1 |
| Eimeria tenella | 1 |
| Eisenibacter elegans | 4 |
| Emiliania huxleyi | 2 |
| Endocladia muricata | 1 |
| endosymbiont of Riftia pachyptila | 1 |
| Enhygromyxa salina | 2 |
| Ensifer adhaerens | 1 |
| Entamoeba histolytica | 3 |
| Enterobacter asburiae | 1 |
| Enterobacter cloacae | 2 |
| Enterobacter hormaechei | 1 |
| Enterococcus casseliflavus | 2 |
| Enterococcus faecalis | 16 |
| Enterococcus faecalis EnGen0310 = MMH594 | 1 |
| Enterococcus faecium | 3 |
| Enterococcus gallinarum | 1 |
| Enterococcus raffinosus | 1 |
| Ephedra gerardiana | 1 |
| Epichloe festucae | 3 |
| Epichloe hybrida | 1 |
| Equisetum arvense | 2 |
| Erwinia amylovora | 2 |
| Erwinia chrysanthemi EC16 | 2 |
| Erwinia sp | 1 |
| Erysiphaceae | 1 |
| Erythrobacter longus | 1 |
| Erythrobacter sp. SD-21 | 1 |
| Erythroxylum coca | 1 |
| Escherichia coli | 3 |
| Escherichia coli ATCC 25922 | 1 |
| Escherichia coli B | 7 |
| Escherichia coli B SPAO | 1 |
| Escherichia coli BL21(DE3) | 1 |
| Escherichia coli C | 4 |
| Escherichia coli CFT073 | 2 |
| Escherichia coli Crookes | 1 |
| Escherichia coli IHE3034 | 1 |
| Escherichia coli J53-1 | 1 |
| Escherichia coli K-12 | 2 |
| Escherichia coli K-12 substr. DH10B | 1 |
| Escherichia coli K-12 substr. MG1655 | 363 |
| Escherichia coli K-12 substr. MG1656 | 1 |
| Escherichia coli K1 | 1 |
| Escherichia coli K4 | 1 |
| Escherichia coli O104 | 1 |
| Escherichia coli O108 | 1 |
| Escherichia coli O111:NM | 1 |
| Escherichia coli O113 | 1 |
| Escherichia coli O157:H7 | 4 |
| Escherichia coli O25b:ST131 | 1 |
| Escherichia coli O26 | 1 |
| Escherichia coli O44:K74 | 1 |
| Escherichia coli O5 | 1 |
| Escherichia coli O52 | 1 |
| Escherichia coli O7:K1 | 1 |
| Escherichia coli O86 | 1 |
| Escherichia coli O86:B7 | 1 |
| Escherichia coli O98 | 1 |
| Escherichia coli O9a | 1 |
| Escherichia coli UTI89 | 1 |
| Escherichia coli W | 7 |
| Eschscholzia californica | 4 |
| Estigmene acrea | 1 |
| Eubacterium barkeri | 1 |
| Eubacterium limosum | 3 |
| Eubacterium oxidoreducens G41 | 1 |
| Eucalyptus piperita | 1 |
| Eudoraea adriatica | 1 |
| Euglena | 1 |
| Euglena gracilis | 16 |
| Eukaryota | 1 |
| Euonymus alatus | 1 |
| Euphorbia lagascae | 1 |
| Eustoma exaltatum russellianum | 2 |
| Exiguobacterium acetylicum | 2 |
| Fagopyrum esculentum | 8 |
| Fagopyrum tataricum | 3 |
| Fagus crenata | 1 |
| Fasciola hepatica | 3 |
| Faxonius limosus | 1 |
| Felis catus | 2 |
| Ferroglobus placidus | 1 |
| Fervidicoccus fontis | 1 |
| Fervidobacterium nodosum | 1 |
| Fischerella ambigua UTEX 1903 | 2 |
| Fischerella muscicola UTEX 1829 | 1 |
| Fischerella sp. ATCC 43239 | 1 |
| Fischerella sp. SAG 46.79 | 1 |
| Flammulina velutipes | 3 |
| Flaveria bidentis | 2 |
| Flaveria chlorifolia | 1 |
| Flavobacterium johnsoniae | 1 |
| Flavobacterium johnsoniae UW101 | 1 |
| Fluoribacter bozemanae | 1 |
| Fluviicola taffensis | 1 |
| Foeniculum vulgare | 5 |
| Foeniculum vulgare dulce | 1 |
| Fomitopsis palustris | 1 |
| Forsythia koreana | 1 |
| Forsythia x intermedia | 1 |
| Fragaria | 2 |
| Fragaria x ananassa | 2 |
| Francisella tularensis novicida U112 | 1 |
| Francisella tularensis tularensis SCHU S4 | 1 |
| Frateuria sp. ANA-18 | 1 |
| Freesia hybrid cultivar | 1 |
| Fucus gardneri | 1 |
| Fulvimarina pelagi HTCC2506 | 1 |
| Fusarium anguioides | 1 |
| Fusarium Caucasicum | 1 |
| Fusarium fujikuroi | 10 |
| Fusarium graminearum | 4 |
| Fusarium graminearum 70E1 | 1 |
| Fusarium graminearum 79A1 | 1 |
| Fusarium graminearum 88-1 | 1 |
| Fusarium graminearum GZ3639 | 1 |
| Fusarium heterosporum | 2 |
| Fusarium incarnatum | 1 |
| Fusarium lateritium | 1 |
| Fusarium oxysporum | 6 |
| Fusarium oxysporum sp. lycopersici | 1 |
| Fusarium phaseoli | 1 |
| Fusarium solani | 3 |
| Fusarium sporotrichioides | 2 |
| Fusarium verticillioides | 2 |
| Fusobacterium nucleatum | 4 |
| Fusobacterium varium | 1 |
| Galanthus elwesii | 1 |
| Galium mollugo | 2 |
| Galleria mellonella | 2 |
| Gallus gallus | 11 |
| gamma proteobacterium HTCC2207 | 1 |
| Gardenia jasminoides | 2 |
| Gelatoporia subvermispora | 1 |
| Geminocystis herdmanii PCC 6308 | 2 |
| Gemmata obscuriglobus | 3 |
| Gemmata sp. Wa1-1 | 1 |
| Gentiana straminea | 2 |
| Gentiana triflora | 2 |
| Geobacillus kaustophilus | 1 |
| Geobacillus stearothermophilus | 16 |
| Geobacillus thermodenitrificans NG80-2 | 1 |
| Geobacter lovleyi SZ | 1 |
| Geobacter sulfurreducens | 1 |
| Geobacter sulfurreducens PCA | 1 |
| Geoglobus acetivorans | 1 |
| Geotrichum sp. M128 | 1 |
| Gerbera hybrid cultivar | 2 |
| Giardia intestinalis | 3 |
| Gimesia maris DSM 8797 | 1 |
| Ginkgo biloba | 6 |
| Glandularia x hybrida | 2 |
| Glebionis segetum | 2 |
| Gloeobacter violaceus | 6 |
| Gloeobacter violaceus PCC 7421 | 2 |
| Gluconobacter | 1 |
| Gluconobacter albidus | 2 |
| Gluconobacter cerinus | 2 |
| Gluconobacter oxydans | 7 |
| Gluconobacter oxydans IFO 3255 | 1 |
| Gluconobacter oxydans UV10 | 1 |
| Glutamicibacter nicotianae | 2 |
| Glutamicibacter protophormiae | 3 |
| Glycine max | 65 |
| Glycyrrhiza echinata | 9 |
| Glycyrrhiza glabra | 8 |
| Glycyrrhiza uralensis | 1 |
| Gordonia amarae | 1 |
| Gordonia bronchialis | 3 |
| Gordonia polyisoprenivorans | 1 |
| Gordonia rubripertincta | 5 |
| Gordonia sp. TY-5 | 1 |
| Gordonia terrae | 3 |
| Gordonia westfalica | 1 |
| Gossypium arboreum | 3 |
| Gossypium barbadense | 3 |
| Gossypium hirsutum | 4 |
| Gottschalkia acidurici | 2 |
| Gottschalkia purinilytica | 2 |
| Gracilariopsis lemaneiformis | 1 |
| Gracilariopsis longissima | 1 |
| Gram-negative bacterium ASV2 | 1 |
| Graphiola phoenicis | 1 |
| Grifola frondosa | 1 |
| Guatteria blepharophylla | 1 |
| Guatteria friesiana | 1 |
| Guatteria hispida | 1 |
| Gymnoascus demonbreunii | 1 |
| Gypsophila vaccaria | 1 |
| Gyrinops | 1 |
| Haematococcus lacustris | 1 |
| Haemonchus contortus | 1 |
| Haemophilus influenzae | 7 |
| Haemophilus influenzae Rd KW20 | 8 |
| Haemophilus parainfluenzae | 2 |
| Halalkalicoccus | 1 |
| Halanaeroarchaeum sulfurireducens | 1 |
| Haliangium ochraceum | 1 |
| Halichondria japonica | 1 |
| Haliotis tuberculata lamellosa | 1 |
| Haloarcula | 1 |
| Haloarcula japonica | 1 |
| Haloarcula marismortui | 6 |
| Halobacteria | 2 |
| Halobacterium salinarum | 11 |
| Halobacterium salinarum NRC-1 | 3 |
| Halobacterium sp. JP-6 | 1 |
| Halobacterium sp. NCIMB 763 | 1 |
| Halococcus morrhuae | 2 |
| Halococcus saccharolyticus | 3 |
| Halodesulfovibrio aestuarii DSM 10141 | 1 |
| Haloferax | 1 |
| Haloferax mediterranei | 4 |
| Haloferax sp. D1227 | 1 |
| Haloferax volcanii | 16 |
| Halomicrobium | 1 |
| Halomonas elongata | 2 |
| Halomonas elongata DSM 2581 | 2 |
| Halomonas halmophila | 2 |
| Halomonas halodenitrificans | 2 |
| Halomonas sp. HTNK1 | 1 |
| Halorhabdus utahensis | 1 |
| Halorhodospira abdelmalekii | 1 |
| Halorhodospira halochloris | 3 |
| Halorhodospira halophila | 2 |
| Halorubrum lacusprofundi | 1 |
| Halorubrum saccharovorum | 5 |
| Halorubrum trapanicum | 2 |
| Haloterrigena | 1 |
| Hapsidospora irregularis | 2 |
| Hathewaya limosa | 1 |
| Hedera helix | 1 |
| Hedychium | 1 |
| Helianthus annuus | 1 |
| Helianthus tuberosus | 2 |
| Helicobacter bizzozeronii CIII-1 | 1 |
| Helicobacter pylori | 10 |
| Helicobacter pylori 26695 | 9 |
| Helicobacter pylori DMS 6709 | 1 |
| Helicobacter pylori SS1 | 1 |
| Helicoverpa armigera | 1 |
| Heliobacterium modesticaldum Ice1 | 1 |
| Herbaspirillum autotrophicum | 1 |
| Herbaspirillum huttiense strain NRRL B-12228 | 2 |
| Herbaspirillum seropedicae | 1 |
| Herminiimonas arsenicoxydans | 1 |
| Hevea brasiliensis | 6 |
| Hippophae rhamnoides | 1 |
| Homo sapiens | 320 |
| Hordeum lechleri | 1 |
| Hordeum vulgare | 28 |
| Hordeum vulgare vulgare | 1 |
| Hormoscilla spongeliae SP12 | 2 |
| human intestinal bacterium SNU-Julong732 | 1 |
| Humulus lupulus | 4 |
| Hungateiclostridium cellulolyticum | 2 |
| Hungateiclostridium thermocellum | 2 |
| Hungateiclostridium thermocellum ATCC 27405 | 4 |
| Hydrangea macrophylla | 1 |
| Hydrogenibacillus schlegelii | 1 |
| Hydrogenobacter thermophilus | 2 |
| Hydrogenophaga flava | 1 |
| Hydrogenophaga flava ENV735 | 1 |
| Hydrogenophaga intermedia | 1 |
| Hydrogenophaga palleronii | 1 |
| Hydrogenophaga palleronii JS863 | 1 |
| Hydrogenophaga pseudoflava | 1 |
| Hydrogenophilus thermoluteolus | 1 |
| Hyoscyamus albus | 2 |
| Hyoscyamus muticus | 1 |
| Hyoscyamus niger | 3 |
| Hypericum androsaemum | 3 |
| Hypericum calycinum | 2 |
| Hypericum perforatum | 3 |
| Hyperthermus butylicus | 4 |
| Hyphomicrobium denitrificans WU-K217 | 1 |
| Hyphomicrobium methylovorum GM2 | 2 |
| Hyphomicrobium sp. EG | 2 |
| Hyphomicrobium sp. S | 2 |
| Hyphomicrobium sulfonivorans | 3 |
| Hyphomicrobium zavarzinii ZV580 | 4 |
| Hyphopichia burtonii | 1 |
| Hyphopichia homilentoma | 1 |
| Ideonella dechloratans | 1 |
| Ideonella sakaiensis | 2 |
| Ignicoccus | 1 |
| Ignicoccus hospitalis | 3 |
| Ignisphaera aggregans | 1 |
| Impatiens balsamina | 2 |
| Ipomoea batatas | 6 |
| Ipomoea nil | 3 |
| Ipomoea purpurea | 1 |
| Ips confusus | 1 |
| Ips paraconfusus | 1 |
| Ips pini | 1 |
| Isatis tinctoria | 1 |
| Isochrysis galbana | 3 |
| Jacquinia angustifolia | 1 |
| Janthinobacterium lividum | 1 |
| Jasminum grandiflorum | 1 |
| Jeotgalicoccus sp. ATCC 8456 | 1 |
| Jonesia denitrificans | 3 |
| Juglans regia | 3 |
| Kalanchoe daigremontiana | 1 |
| Kandelia candel | 3 |
| Keratinophyton hispanicum | 1 |
| Keratinophyton saturnoideum | 1 |
| Keratinophyton terreum | 1 |
| Ketogulonicigenium vulgare | 1 |
| Ketogulonicigenium vulgare DSM 4025 | 1 |
| Kitasatospora aureofaciens | 5 |
| Kitasatospora griseola MF730-N6 MF730-N6 | 1 |
| Kitasatospora phosalacinea | 1 |
| Klebsiella aerogenes | 27 |
| Klebsiella michiganensis M5al | 2 |
| Klebsiella oxytoca | 5 |
| Klebsiella oxytoca TauN1 | 2 |
| Klebsiella pneumoniae | 28 |
| Klebsiella pneumoniae O3 | 1 |
| Klebsiella pneumoniae pneumoniae MGH 78578 | 1 |
| Kluyveromyces lactis | 1 |
| Kluyveromyces marxianus | 1 |
| Kocuria rhizophila | 1 |
| Kocuria rosea | 2 |
| Kocuria varians | 1 |
| Komagataeibacter xylinus | 3 |
| Komagataella pastoris | 3 |
| Komagataella phaffii GS115 | 1 |
| Kregervanrija fluxuum | 1 |
| Kribbella flavida | 1 |
| Kuraishia capsulata | 1 |
| Labrenzia aggregata | 1 |
| Labrenzia aggregata IAM 12614 | 1 |
| Lachancea kluyveri | 2 |
| Lachnospiraceae bacterium | 1 |
| Lachnospiraceae bacterium 19gly4 | 1 |
| Lactobacillaceae | 1 |
| Lactobacillus brevis | 8 |
| Lactobacillus buchneri | 2 |
| Lactobacillus casei | 11 |
| Lactobacillus fermentum | 2 |
| Lactobacillus helveticus | 3 |
| Lactobacillus hilgardii | 1 |
| Lactobacillus mali | 4 |
| Lactobacillus paraplantarum | 1 |
| Lactobacillus plantarum | 9 |
| Lactobacillus reuteri | 2 |
| Lactobacillus rhamnosus GG | 1 |
| Lactobacillus salivarius | 1 |
| Lactobacillus sanfranciscensis | 1 |
| Lactobacillus sp. 30A | 1 |
| Lactococcus garvieae 20-92 | 1 |
| Lactococcus lactis | 18 |
| Lactococcus lactis cremoris | 5 |
| Lactococcus lactis lactis | 2 |
| Lactococcus lactis lactis bv. diacetylactis | 2 |
| Lactuca sativa | 1 |
| Lactuca sativa romaine | 8 |
| Laminaria digitata | 1 |
| Lamium galeobdolon | 1 |
| Lampranthus sociorum | 1 |
| Lathyrus odoratus | 1 |
| Lathyrus sativus | 1 |
| Lathyrus tingitanus | 1 |
| Lavandula angustifolia | 2 |
| Lawsonia inermis | 1 |
| Legionella pneumophila | 3 |
| Legionella pneumophila pneumophila Philadelphia 1 | 1 |
| Leifsonia aquatica | 4 |
| Leishmania braziliensis | 1 |
| Leishmania donovani | 1 |
| Leishmania donovani species complex | 1 |
| Leishmania infantum | 1 |
| Leishmania mexicana | 1 |
| Leishmania mexicana species complex | 1 |
| Leishmania tarentolae | 1 |
| Leishmania tropica species complex | 1 |
| Leisingera caerulea | 1 |
| Lemna aequinoctialis | 1 |
| Lemna minor | 1 |
| Lens culinaris | 2 |
| Lentinus sajor-caju | 1 |
| Lentzea aerocolonigenes | 1 |
| Lentzea albida | 1 |
| Lepidium sativum | 2 |
| Leptolyngbya boryana | 1 |
| Leptospira biflexa serovar Patoc | 1 |
| Leptospira borgpetersenii | 2 |
| Leptospira interrogans | 5 |
| Leptospira interrogans serovar Bataviae | 2 |
| Leptospira interrogans serovar Lai str. 56601 | 2 |
| Leptospira meyeri | 1 |
| Leptothrix discophora strain SS-1 | 1 |
| Leucaena leucocephala | 2 |
| Leuconostoc lactis | 3 |
| Leuconostoc mesenteroides | 3 |
| Leuconostoc mesenteroides cremoris | 5 |
| Leuconostoc mesenteroides dextranicum | 1 |
| Lilium lancifolium | 1 |
| Lilium longiflorum | 1 |
| Limnanthes alba | 3 |
| Limnanthes douglasii | 3 |
| Limonium latifolium | 3 |
| Lingulodinium polyedra | 1 |
| Linum | 1 |
| Linum flavum | 3 |
| Linum nodiflorum | 3 |
| Linum perenne | 2 |
| Linum usitatissimum | 9 |
| Lipomyces starkeyi | 1 |
| Listeria grayi | 2 |
| Listeria innocua | 2 |
| Listeria monocytogenes | 2 |
| Litchi chinensis | 1 |
| Lithobates catesbeianus | 1 |
| Lithospermum erythrorhizon | 5 |
| Littorina littorea | 1 |
| Locusta migratoria | 1 |
| Lophophyton gallinae | 1 |
| Lotus corniculatus | 4 |
| Lotus japonicus | 10 |
| Luciola mingrelica | 1 |
| Luffa aegyptiaca | 1 |
| Lunaria annua | 1 |
| Lupinus albus | 5 |
| Lupinus angustifolius | 4 |
| Lupinus luteus | 11 |
| Lupinus polyphyllus | 1 |
| Lycopersicon hirsutum glabratum | 3 |
| Lygodium circinatum | 1 |
| Lymnaea stagnalis | 1 |
| Lyngbya majuscula | 1 |
| Lysinibacillus massiliensis | 1 |
| Lysinibacillus sphaericus | 5 |
| Lysobacter dokdonensis | 1 |
| Macaca fuscata | 1 |
| Macaca mulatta | 1 |
| Magnetococcus | 1 |
| Magnetospirillum | 1 |
| Magnolia | 1 |
| Magnolia grandiflora | 2 |
| Magnolia obovata | 1 |
| Malonomonas rubra | 1 |
| Malus domestica | 10 |
| Malus domestica Golden Delicious | 1 |
| Malus domestica Holsteiner Cox | 1 |
| Malus hupehensis | 1 |
| Malus pumila | 1 |
| Malus sp | 1 |
| Mammalia | 15 |
| Manduca sexta | 3 |
| Mangifera indica | 1 |
| Manihot esculenta | 4 |
| Marchantia polymorpha | 1 |
| Maricaulis maris MCS10 | 1 |
| Marichromatium gracile | 1 |
| Marichromatium purpuratum | 1 |
| Marinobacter hydrocarbonoclasticus | 1 |
| Marinobacter hydrocarbonoclasticus VT8 | 1 |
| Marinomonas mediterranea MMB-1 | 4 |
| Marinomonas sp. MED121 | 2 |
| Marinomonas sp. MWYL1 | 2 |
| Marinosulfonomonas methylotropha | 1 |
| Maritimibacter alkaliphilus HTCC2654 | 1 |
| Marphysa sanguinea | 1 |
| Mastigocladus laminosus | 2 |
| Matthiola incana | 4 |
| Medicago sativa | 13 |
| Medicago truncatula | 18 |
| Megasphaera elsdenii | 2 |
| Megathyrsus maximus | 1 |
| Melampsora epitea | 1 |
| Melilotus albus | 2 |
| Melissa officinalis | 1 |
| Melosira nummuloides | 1 |
| Mentha aquatica citrata | 1 |
| Mentha spicata | 3 |
| Mentha x gracilis | 1 |
| Mentha x piperita | 6 |
| Meretrix lusoria | 1 |
| Mesembryanthemum crystallinum | 2 |
| Mesocricetus auratus | 3 |
| Mesorhizobium loti | 5 |
| Metallosphaera cuprina | 1 |
| Metallosphaera sedula | 3 |
| Metazoa | 1 |
| Methanobacteria | 5 |
| Methanobacterium bryantii | 3 |
| Methanobacterium formicicum | 1 |
| Methanobacterium ivanovii | 1 |
| Methanobrevibacter | 1 |
| Methanobrevibacter arboriphilus | 2 |
| Methanobrevibacter ruminantium | 1 |
| Methanobrevibacter smithii | 4 |
| Methanocaldococcus fervens | 1 |
| Methanocaldococcus jannaschii | 32 |
| Methanocella conradii HZ254 | 1 |
| Methanococcales | 1 |
| Methanococci | 6 |
| Methanococcoides burtonii | 1 |
| Methanococcoides burtonii DSM 6242 | 1 |
| Methanococcoides sp. NaT1 | 1 |
| Methanococcus | 1 |
| Methanococcus aeolicus | 2 |
| Methanococcus maripaludis | 8 |
| Methanococcus vannielii | 1 |
| Methanococcus voltae | 5 |
| Methanoculleus | 2 |
| Methanoculleus marisnigri | 1 |
| Methanogenium | 3 |
| Methanohalobium evestigatum Z-7303 | 1 |
| Methanohalophilus mahii DSM 5219 | 1 |
| Methanohalophilus portucalensis | 3 |
| Methanolinea tarda | 1 |
| Methanolobus psychrophilus | 1 |
| Methanolobus psychrophilus R15 | 1 |
| Methanolobus tindarius | 1 |
| Methanolobus vulcani B1d | 1 |
| Methanomicrobia | 4 |
| Methanoplanus | 1 |
| Methanoplanus limicola | 1 |
| Methanopyri | 2 |
| Methanopyrus kandleri AV19 | 1 |
| Methanosarcina | 14 |
| Methanosarcina acetivorans | 13 |
| Methanosarcina acetivorans C2A | 3 |
| Methanosarcina barkeri | 25 |
| Methanosarcina barkeri Fusaro | 2 |
| Methanosarcina mazei | 5 |
| Methanosarcina mazei Go1 | 5 |
| Methanosarcina thermophila | 20 |
| Methanosarcina TM-1 | 10 |
| Methanosphaera stadtmanae | 2 |
| Methanospirillum | 2 |
| Methanospirillum hungatei | 2 |
| Methanothermobacter marburgensis | 2 |
| Methanothermobacter marburgensis Marburg | 5 |
| Methanothermobacter thermautotrophicus | 19 |
| Methanothermobacter thermautotrophicus Delta H | 5 |
| Methanothermobacter thermautotrophicus Winter | 1 |
| Methanothermococcus thermolithotrophicus | 1 |
| Methanothermus | 4 |
| Methanothermus fervidus | 3 |
| Methanothrix | 1 |
| Methanothrix soehngenii | 1 |
| Methanothrix thermoacetophila | 2 |
| Methylibium petroleiphilum PM1 | 1 |
| Methylobacillus flagellatus | 5 |
| Methylobacillus flagellatus KT | 1 |
| Methylobacter luteus | 1 |
| Methylobacter marinus | 1 |
| Methylobacter whittenburyi | 3 |
| Methylobacterium nodulans | 1 |
| Methylobacterium organophilum | 4 |
| Methyloceanibacter caenitepidi | 1 |
| Methylocella silvestris | 2 |
| Methylococcus capsulatus | 4 |
| Methylococcus capsulatus Bath | 3 |
| Methylococcus thermophilus | 1 |
| Methylocystis echinoides | 3 |
| Methylocystis minimus | 3 |
| Methylocystis parvus | 3 |
| Methylocystis pyriformis | 3 |
| Methylomicrobium agile | 1 |
| Methylomicrobium album | 1 |
| Methylomicrobium alcaliphilum 20Z | 2 |
| Methylomicrobium japanense | 1 |
| Methylomicrobium pelagicum | 1 |
| Methylomonas aminofaciens 77a | 2 |
| Methylomonas aurantiaca | 1 |
| Methylomonas fodinarum | 1 |
| Methylomonas methanica | 1 |
| Methylomonas sp. 16a | 1 |
| Methylomonas sp. J | 2 |
| Methylomonas sp. KSPIII | 1 |
| Methylophaga thalassica | 2 |
| Methylophaga thiooxydans | 1 |
| Methylophilus methylotrophus W3A1 | 2 |
| Methylorubrum extorquens | 2 |
| Methylorubrum extorquens AM1 | 11 |
| Methylorubrum extorquens CM4 | 1 |
| Methylorubrum extorquens PA1 | 1 |
| Methylorubrum populi BJ001 | 1 |
| Methylosarcina lacus | 1 |
| Methylosinus sporium | 2 |
| Methylosinus trichosporium | 2 |
| Methylosinus trichosporium OB3b | 3 |
| Methylosphaera | 1 |
| Methylosphaera hansonii | 2 |
| Methylosulfonomonas methylovora | 1 |
| Methylosulfonomonas sp. M2 | 1 |
| Methyloversatilis universalis | 2 |
| Methylovorus mays | 2 |
| Methylovorus sp. MP688 | 1 |
| Metschnikowia pulcherrima | 1 |
| Meyerozyma guilliermondii | 2 |
| Microbacterium barkeri | 4 |
| Microbacterium imperiale | 4 |
| Microbacterium lacticum | 5 |
| Microbacterium liquefaciens | 5 |
| Microbacterium oxydans IH-35A | 1 |
| Microbacterium saperdae | 5 |
| Microbacterium sp | 1 |
| Microbacterium testaceum | 5 |
| Microchaete diplosiphon | 1 |
| Micrococcus luteus | 11 |
| Micrococcus luteus B-P 26 | 4 |
| Micrococcus percitreus | 1 |
| Microdochium sorghi | 1 |
| Micromonospora | 1 |
| Micromonospora carbonacea | 2 |
| Micromonospora echinospora | 1 |
| Micromonospora griseorubida | 2 |
| Micromonospora megalomicea | 5 |
| Micromonospora rosaria | 1 |
| Micromonospora sp. ACM2-092 | 2 |
| Micromonospora sp. ML1 | 2 |
| Microsporum canis | 1 |
| Mirabilis jalapa | 1 |
| Momordica charantia | 1 |
| Monascus pilosus | 1 |
| Monascus purpureus | 1 |
| Monascus ruber | 1 |
| Moniezia expansa | 1 |
| Moorea producens | 2 |
| Moorella thermoacetica | 8 |
| Moorella thermoautotrophica | 1 |
| Moraxella | 1 |
| Moraxella sp | 1 |
| Moraxella sp. B | 1 |
| Morchella costata | 1 |
| Morchella vulgaris | 1 |
| Morganella morganii | 3 |
| Moritella marina ATCC 15381 | 1 |
| Mortierella alpina | 5 |
| Mucor circinelloides | 1 |
| Mus musculus | 56 |
| Musa acuminata | 2 |
| Musca domestica | 4 |
| Mycena chlorophos | 1 |
| Mycobacterium | 4 |
| Mycobacterium austroafricanum IFP 2012 | 1 |
| Mycobacterium austroafricanum IFP 2015 | 1 |
| Mycobacterium avium | 6 |
| Mycobacterium avium complex (MAC) | 1 |
| Mycobacterium avium paratuberculosis | 3 |
| Mycobacterium butyricum | 1 |
| Mycobacterium gastri | 1 |
| Mycobacterium gastri MN19 | 3 |
| Mycobacterium goodii strain 12523 | 1 |
| Mycobacterium gordonae | 1 |
| Mycobacterium intracellulare | 3 |
| Mycobacterium kansasii | 2 |
| Mycobacterium lacticola | 2 |
| Mycobacterium leprae | 6 |
| Mycobacterium marinum | 5 |
| Mycobacterium sp. DSM 3803 | 1 |
| Mycobacterium sp. ELW1 | 1 |
| Mycobacterium sp. G3 | 1 |
| Mycobacterium sp. HL 4-NT-1 | 1 |
| Mycobacterium sp. NRRL B-3683 | 1 |
| Mycobacterium sp. Py1 | 1 |
| Mycobacterium tuberculosis | 33 |
| Mycobacterium tuberculosis CDC1551 | 2 |
| Mycobacterium tuberculosis complex | 1 |
| Mycobacterium tuberculosis H37Rv | 51 |
| Mycobacterium tuberculosis variant africanum | 2 |
| Mycobacterium tuberculosis variant bovis | 14 |
| Mycobacterium tuberculosis variant bovis AF2122/97 | 1 |
| Mycobacterium ulcerans | 1 |
| Mycobacterium vaccae JOB5 | 1 |
| Mycolicibacterium farcinogenes | 3 |
| Mycolicibacterium fortuitum | 3 |
| Mycolicibacterium neoaurum VKM Ac-1815D | 1 |
| Mycolicibacterium phlei | 8 |
| Mycolicibacterium rhodesiae JS60 | 1 |
| Mycolicibacterium smegmatis | 25 |
| Mycolicibacterium smegmatis MC2 155 | 2 |
| Mycolicibacterium vaccae | 3 |
| Mycoplasma genitalium | 1 |
| Mycoplasma hominis | 1 |
| Mycoplasma pneumoniae | 1 |
| Mycoplasma pneumoniae M129 | 17 |
| Mytilus californianus | 1 |
| Mytilus edulis | 2 |
| Mytilus galloprovincialis | 1 |
| Mytilus trossulus | 1 |
| Myxococcus fulvus | 6 |
| Myxococcus xanthus | 4 |
| Myxotrichum chartarum | 1 |
| Myxotrichum stipitatum | 1 |
| Myxozyma melibiosi | 1 |
| Myzus cerasi | 1 |
| Nakazawaea anatomiae | 1 |
| Nakazawaea ernobii | 1 |
| Nakazawaea holstii | 1 |
| Nakazawaea ishiwadae | 1 |
| Nakazawaea peltata | 1 |
| Nakazawaea populi | 1 |
| Nakazawaea wickerhamii | 1 |
| Nannizzia fulva | 1 |
| Nannizzia gypsea | 1 |
| Nannizzia incurvata | 1 |
| Nannizzia nana | 1 |
| Nannizzia persicolor | 1 |
| Nannizzia racemosa | 1 |
| Nannocystis exedens | 3 |
| Narcissus aff. pseudonarcissus MK-2014 | 1 |
| Narcissus pseudonarcissus | 1 |
| Natranaerobius thermophilus | 1 |
| Natrialba | 1 |
| Natrialba magadii | 1 |
| Natronomonas | 1 |
| Nauphoeta cinerea | 1 |
| Neisseria gonorrhoeae | 1 |
| Neisseria gonorrhoeae FA 1090 | 2 |
| Neisseria gonorrhoeae MS11 | 2 |
| Neisseria meningitidis | 5 |
| Neisseria meningitidis serogroup B | 1 |
| Neisseria meningitidis Z2491 | 2 |
| Neisseriaceae | 2 |
| Neocallimastix sp. LM-2 | 2 |
| Neonectria obtusispora | 1 |
| Neonothopanus gardneri | 1 |
| Neonothopanus nambi | 1 |
| Neosiphonia paniculata | 1 |
| Nepenthes alata | 1 |
| Nepenthes rafflesiana | 1 |
| Nepeta cataria | 1 |
| Nepeta racemosa | 1 |
| Neptunia | 1 |
| Neptuniibacter caesariensis | 1 |
| Neptuniibacter sp. CAR-SF | 1 |
| Nerine bowdenii | 1 |
| Nesterenkonia halobia | 1 |
| Neurospora crassa | 14 |
| Neurospora crassa 15069 | 1 |
| Neurospora crassa 33933 | 1 |
| Nicotiana attenuata | 3 |
| Nicotiana benthamiana | 1 |
| Nicotiana glutinosa | 1 |
| Nicotiana plumbaginifolia | 1 |
| Nicotiana rustica | 1 |
| Nicotiana sylvestris | 3 |
| Nicotiana tabacum | 58 |
| Nitratiruptor sp. SB155-2 | 1 |
| Nitrobacter | 1 |
| Nitrobacter alkalicus | 1 |
| Nitrobacter hamburgensis | 1 |
| Nitrobacter vulgaris | 1 |
| Nitrobacter winogradskyi | 1 |
| Nitrococcus | 1 |
| Nitrosococcus oceani | 2 |
| Nitrosomonas | 1 |
| Nitrosomonas cryotolerans | 1 |
| Nitrosomonas europaea | 1 |
| Nitrosomonas eutropha | 1 |
| Nitrosopumilus maritimus | 2 |
| Nitrosopumilus maritimus SCM1 | 2 |
| Nitrosospira briensis | 1 |
| Nitrosospira multiformis | 2 |
| Nitrosospira tenuis | 1 |
| Nitrospina | 1 |
| Nitrospira moscoviensis | 1 |
| Nocardia | 2 |
| Nocardia asteroides | 1 |
| Nocardia brasiliensis | 1 |
| Nocardia farcinica | 1 |
| Nocardia globerula | 1 |
| Nocardia transvalensis | 1 |
| Nocardia uniformis tsuyamanensis | 1 |
| Nocardia vaccinii | 1 |
| Nocardioides simplex FJ2-1A | 1 |
| Nocardioides sp. C190 | 1 |
| Nocardioides sp. CB 22-2 | 1 |
| Nocardioides sp. JS1661 | 1 |
| Nocardioides sp. JS614 | 3 |
| Nocardioides sp. SP12 | 1 |
| Nocardiopsis | 1 |
| Nocardiopsis dassonvillei | 2 |
| Nocardiopsis sp. K-290 | 1 |
| Noctiluca scintillans | 1 |
| Nonlabens ulvanivorans | 1 |
| Nonomuraea longicatena | 1 |
| Nostoc commune | 1 |
| Nostoc punctiforme | 7 |
| Nostoc punctiforme PCC 73102 | 4 |
| Nostoc sp. 36 | 4 |
| Nostoc sp. PCC 7120 | 8 |
| Nothapodytes nimmoniana | 2 |
| Novosphingobium aromaticivorans | 1 |
| Oceanimonas doudoroffii | 2 |
| Ochrobactrum | 1 |
| Ochrobactrum anthropi | 1 |
| Ochrobactrum anthropi ATCC 49188 | 3 |
| Ochrobactrum anthropi GPK 3 | 1 |
| Ochrobactrum rhizosphaerae SJY1 | 1 |
| Ochrobactrum sp. G-1 | 1 |
| Ochrobactrum sp. JAS2 | 1 |
| Ochrobactrum tritici | 1 |
| Ochromonas danica | 1 |
| Ocimum basilicum | 9 |
| Odoribacter splanchnicus | 3 |
| Oenococcus oeni | 6 |
| Oenothera biennis | 1 |
| Oerskovia turbata | 1 |
| Ogataea angusta | 3 |
| Ogataea methanolica | 4 |
| Ogataea minuta | 3 |
| Ogataea pignaliae | 1 |
| Ogataea salicorniae | 1 |
| Olea europaea | 1 |
| Oleomonas sagaranensis | 1 |
| Oligotropha carboxidovorans | 1 |
| Olsenella uli | 1 |
| Onchidium | 1 |
| Oncorhynchus mykiss | 2 |
| Onygena corvina | 1 |
| Onygena equina | 1 |
| Ophiorrhiza japonica | 2 |
| Ophiorrhiza pumila | 2 |
| Oryctolagus cuniculus | 9 |
| Oryza | 1 |
| Oryza sativa | 47 |
| Oryza sativa Indica Group | 2 |
| Oryza sativa Japonica Group | 14 |
| Oryza sativa Japonica Group cultivar Nipponbare | 3 |
| Oscillatoria sp. PCC 7926 | 1 |
| Ostreococcus sp. lucimarinus | 1 |
| Ovis aries | 3 |
| Oxalobacter formigenes | 1 |
| Oxybasis rubra | 1 |
| Paecilomyces sp. (in: Eurotiomycetes) | 1 |
| Paederus sabaeus endosymbiont | 1 |
| Paenarthrobacter aurescens | 1 |
| Paenarthrobacter aurescens TC1 | 1 |
| Paenarthrobacter ilicis | 1 |
| Paenarthrobacter nicotinovorans | 2 |
| Paenarthrobacter ureafaciens | 2 |
| Paenibacillus alvei | 1 |
| Paenibacillus borealis | 1 |
| Paenibacillus macerans | 2 |
| Paenibacillus polymyxa | 2 |
| Paenibacillus polymyxa E681 | 1 |
| Paenibacillus polymyxa SC2 | 1 |
| Paenibacillus popilliae | 1 |
| Paenibacillus sp. A11-2 | 1 |
| Paenibacillus sp. JJ-1b | 1 |
| Paenibacillus terrae | 1 |
| Palmaria palmata | 1 |
| Panax ginseng | 6 |
| Panax notoginseng | 2 |
| Pandoraea pnomenusa | 1 |
| Panicum miliaceum | 1 |
| Pantoea agglomerans | 8 |
| Pantoea ananatis | 3 |
| Pantoea cypripedii | 1 |
| Pantoea stewartii | 1 |
| Pantoea stewartii stewartii | 1 |
| Papaver somniferum | 9 |
| Parabacteroides distasonis | 3 |
| Parabacteroides goldsteinii | 1 |
| Parabacteroides sp. CAG:409 | 1 |
| Paraburkholderia bryophila | 1 |
| Paraburkholderia graminis C4D1M | 2 |
| Paraburkholderia phenoliruptrix | 1 |
| Paraburkholderia phymatum | 1 |
| Paraburkholderia phytofirmans | 1 |
| Paraburkholderia phytofirmans PsJN | 1 |
| Paraburkholderia rhizoxinica | 1 |
| Paraburkholderia sacchari | 1 |
| Paraburkholderia xenovorans LB400 | 4 |
| Paracoccus denitrificans | 16 |
| Paracoccus denitrificans NCIMB 8944 | 1 |
| Paracoccus denitrificans NKNIS | 3 |
| Paracoccus denitrificans PD1222 | 2 |
| Paracoccus laeviglucosivorans | 1 |
| Paracoccus pantotrophus | 4 |
| Paracoccus pantotrophus NKNCYSA | 1 |
| Paracoccus sp. TRP | 1 |
| Paracoccus thiophilus | 1 |
| Paracoccus versutus | 6 |
| Paraphyton cookei | 1 |
| Paraprevotella clara | 1 |
| Paraprevotella xylaniphila | 1 |
| Passalora fulva | 1 |
| Passiflora edulis | 1 |
| Pasteurella multocida | 4 |
| Patiria pectinifera | 1 |
| Paul's Scarlet Climber Rose | 1 |
| Pavlova lutheri | 1 |
| Pavlova pinguis | 1 |
| Pavlova sp. CCMP459 | 3 |
| Pecten jacobaeus | 1 |
| Pecten maximus | 1 |
| Pectinatus frisingensis | 1 |
| Pectinotrichum llanense | 1 |
| Pectobacterium atrosepticum SCRI1043 | 3 |
| Pectobacterium carotovorum | 6 |
| Pectobacterium carotovorum carotovorum | 2 |
| Pectobacterium carotovorum carotovorum WPP14 | 2 |
| Pediococcus parvulus | 1 |
| Pediococcus pentosaceus | 3 |
| Pedobacter heparinus | 4 |
| Pedomicrobium sp. ACM 3067 | 1 |
| Peganum harmala | 1 |
| Pelargonium crispum | 1 |
| Pelobacter acetylenicus | 4 |
| Pelobacter carbinolicus | 2 |
| Pelobacter carbinolicus DSM 2380 | 1 |
| Pelobacter propionicus | 4 |
| Pelobacter venetianus | 1 |
| Pelomonas saccharophila | 3 |
| Pelosinus fermentans DSM 17108 | 1 |
| Penaeus japonicus | 1 |
| Penicilliopsis zonata | 1 |
| Penicillium aethiopicum | 5 |
| Penicillium chrysogenum | 7 |
| Penicillium cyclopium | 2 |
| Penicillium digitatum | 3 |
| Penicillium digitatum ATCC 201167 | 1 |
| Penicillium expansum | 2 |
| Penicillium glabrum | 2 |
| Penicillium griseofulvum | 1 |
| Penicillium janthinellum | 1 |
| Penicillium malachiteum | 1 |
| Penicillium nordicum | 1 |
| Penicillium olsonii | 1 |
| Penicillium palitans | 1 |
| Penicillium paxilli | 2 |
| Penicillium paxilli ATCC 26601 | 2 |
| Penicillium thymicola | 1 |
| Penicillium urticae | 1 |
| Penicillium verrucosum | 1 |
| Peptoclostridium acidaminophilum | 1 |
| Peptoclostridium litorale | 1 |
| Peptoniphilus asaccharolyticus | 2 |
| Pericallis cruenta | 1 |
| Perilla citriodora | 1 |
| Perilla frutescens | 10 |
| Periplaneta americana | 2 |
| Periplaneta fuliginosa | 1 |
| Persea americana | 2 |
| Persephonella marina | 2 |
| Persicaria tinctoria | 2 |
| Petiveria alliacea | 1 |
| Petroselinum crispum | 9 |
| Petrotoga miotherma | 3 |
| Petrotoga mobilis | 3 |
| Petunia x hybrida | 21 |
| Peziza ostracoderma | 1 |
| Phaeobacter inhibens 2.10 | 1 |
| Phaeodactylum tricornutum | 3 |
| Phaeosphaeria sp. L487 | 1 |
| Phaeospirillum fulvum | 3 |
| Phaeospirillum molischianum | 3 |
| Phaffomyces opuntiae | 1 |
| Phanerochaete chrysosporium | 3 |
| Phaseolus coccineus | 2 |
| Phaseolus lunatus | 3 |
| Phaseolus vulgaris | 12 |
| Phialophora <family Herpotrichiellaceae> | 1 |
| Phlebodium aureum | 1 |
| Phleum pratense | 1 |
| Phormia regina | 1 |
| Phormidium lapideum | 1 |
| Photinus pyralis | 1 |
| Photobacterium angustum S14 | 1 |
| Photobacterium damselae | 1 |
| Photobacterium halotolerans | 1 |
| Photobacterium leiognathi leiognathi | 2 |
| Photobacterium phosphoreum | 1 |
| Photobacterium profundum SS9 | 1 |
| Photobacterium sp. SKA34 | 1 |
| Photorhabdus laumondii laumondii TTO1 | 1 |
| Photorhabdus luminescens | 1 |
| Phycomyces blakesleeanus | 1 |
| Physaria | 1 |
| Physaria fendleri | 2 |
| Physaria kathryn | 2 |
| Physaria lindheimeri | 2 |
| Physarum polycephalum | 1 |
| Physcomitrella patens | 6 |
| Phytomonas | 1 |
| Phytophthora cactorum | 1 |
| Phytophthora infestans | 1 |
| Picea abies | 10 |
| Picea glauca | 1 |
| Picea sitchensis | 1 |
| Pichia fermentans | 1 |
| Pichia norvegensis | 1 |
| Picrophilus torridus | 1 |
| Pieris rapae | 1 |
| Pigmentiphaga sp. DL-8 | 1 |
| Pimelobacter simplex | 6 |
| Pimelobacter sp. R48 | 1 |
| Pimpinella | 1 |
| Pimpinella anisum | 4 |
| Pinus banksiana | 1 |
| Pinus contorta | 4 |
| Pinus densiflora | 2 |
| Pinus ponderosa | 1 |
| Pinus sabiniana | 1 |
| Pinus strobus | 3 |
| Pinus sylvestris | 7 |
| Pinus taeda | 10 |
| Piper methysticum | 2 |
| Piper nigrum | 1 |
| Pisum sativum | 52 |
| Planococcus antarcticus | 1 |
| Planococcus citreus | 1 |
| Plasmodium falciparum | 8 |
| Plasmodium falciparum 3D7 | 2 |
| Plasmodium falciparum HB3 | 1 |
| Plasmodium malariae | 1 |
| Plasmodium ovale | 1 |
| Plasmodium vivax | 1 |
| Plectranthus barbatus | 1 |
| Plectranthus scutellarioides | 2 |
| Plesiocystis pacifica | 2 |
| Plesiomonas shigelloides | 1 |
| Plesiomonas sp. M6 | 1 |
| Plesiomonas sp. Yoshida 95 | 1 |
| Pleurotus ostreatus | 1 |
| Pleurotus sapidus | 1 |
| Plumbago europaea | 1 |
| Plumbago indica | 1 |
| Podophyllum peltatum | 3 |
| Pogostemon cablin | 4 |
| Polaribacter filamentus | 1 |
| Polaribacter irgensii 23-P | 1 |
| Polygonum cuspidatum | 2 |
| Populus | 1 |
| Populus alba | 1 |
| Populus deltoides | 3 |
| Populus nigra | 2 |
| Populus tremula x Populus alba | 1 |
| Populus tremula x Populus tremuloides | 2 |
| Populus tremuloides | 1 |
| Populus trichocarpa | 3 |
| Populus trichocarpa x Populus deltoides | 1 |
| Porphyrobacter tepidarius | 1 |
| Porphyromonas asaccharolytica | 5 |
| Porphyromonas gingivalis | 3 |
| Porphyromonas levii | 3 |
| Portulaca grandiflora | 3 |
| Portulaca oleracea | 1 |
| Postechiella marina | 1 |
| Prauserella rugosa | 1 |
| Prevotella brevis | 5 |
| Prevotella dentalis | 1 |
| Prevotella denticola | 1 |
| Prevotella intermedia | 2 |
| Prevotella melaninogenica | 5 |
| Prevotella oralis | 8 |
| Prevotella paludivivens | 1 |
| Prevotella ruminicola | 9 |
| Prochlorococcus marinus | 2 |
| Prochlorococcus marinus marinus CCMP1375 | 3 |
| Prochlorococcus marinus MIT 9211 | 1 |
| Prochlorococcus marinus MIT 9313 | 2 |
| Prochlorococcus marinus pastoris CCMP1986 | 7 |
| Prochlorococcus phage P-SSM2 | 1 |
| Prochlorococcus phage P-SSM4 | 1 |
| Prochloron didemni | 1 |
| Prochloron didemni P2-Fiji | 1 |
| Promicromonospora citrea | 1 |
| Propionibacterium cyclohexanicum | 1 |
| Propionibacterium freudenreichii | 5 |
| Propionibacterium freudenreichii shermanii | 6 |
| Propionigenium modestum | 1 |
| Propionispora vibrioides | 1 |
| Proteiniphilum acetatigenes | 1 |
| Proteus mirabilis | 6 |
| Proteus penneri 26 | 1 |
| Proteus vulgaris | 11 |
| Proteus vulgaris OX2 | 1 |
| Protoperidinium depressum | 1 |
| Prototheca wickerhamii | 1 |
| Providencia alcalifaciens | 1 |
| Providencia stuartii | 1 |
| Prunella vulgaris | 1 |
| Prunus dulcis | 1 |
| Prunus mume | 1 |
| Prunus serotina | 1 |
| Pseudaminobacter salicylatoxidans | 2 |
| Pseudanabaena limnetica | 1 |
| Pseudanabaena limnetica Castaic Lake | 1 |
| Pseudarthrobacter oxydans | 1 |
| Pseudarthrobacter polychromogenes | 2 |
| Pseudarthrobacter sulfonivorans | 2 |
| Pseudo-nitzschia multiseries | 1 |
| Pseudoalteromonas atlantica T6c | 1 |
| Pseudoalteromonas carrageenovora | 2 |
| Pseudoalteromonas haloplanktis | 1 |
| Pseudoalteromonas haloplanktis TAC125 | 1 |
| Pseudoalteromonas luteoviolacea | 2 |
| Pseudoalteromonas luteoviolacea 2ta16 | 3 |
| Pseudoalteromonas phenolica O-BC30 | 3 |
| Pseudoalteromonas sp. AJ5 | 1 |
| Pseudoalteromonas sp. CL19 | 1 |
| Pseudoalteromonas sp. LL1 | 1 |
| Pseudoalteromonas tetraodonis | 1 |
| Pseudobacteroides cellulosolvens | 2 |
| Pseudohyphozyma bogoriensis | 2 |
| Pseudomonas | 7 |
| Pseudomonas aeruginosa | 81 |
| Pseudomonas aeruginosa O11 | 1 |
| Pseudomonas aeruginosa O12 | 1 |
| Pseudomonas aeruginosa O4 | 1 |
| Pseudomonas aeruginosa O5 | 1 |
| Pseudomonas aeruginosa PA14 | 2 |
| Pseudomonas aeruginosa PAO1 | 19 |
| Pseudomonas aeruginosa TAU-5 | 1 |
| Pseudomonas alcaligenes | 1 |
| Pseudomonas alcaligenes NCIMB 9867 | 3 |
| Pseudomonas amygdali pv. sesami | 1 |
| Pseudomonas cepacia 122 | 1 |
| Pseudomonas chloritidismutans | 1 |
| Pseudomonas chlororaphis | 1 |
| Pseudomonas chlororaphis aureofaciens | 1 |
| Pseudomonas chlororaphis aureofaciens 30-84 | 2 |
| Pseudomonas chlororaphis B23 | 2 |
| Pseudomonas chlororaphis chlororaphis | 5 |
| Pseudomonas citronellolis | 2 |
| Pseudomonas clemancea | 1 |
| Pseudomonas collierea | 1 |
| Pseudomonas cruciviae | 1 |
| Pseudomonas deceptionensis | 1 |
| Pseudomonas denitrificans (nomen rejiciendum) | 8 |
| Pseudomonas entomophila L48 | 1 |
| Pseudomonas fluorescens | 33 |
| Pseudomonas fluorescens 2-79 | 1 |
| Pseudomonas fluorescens 23F | 1 |
| Pseudomonas fluorescens ACB | 1 |
| Pseudomonas fluorescens AN103 | 1 |
| Pseudomonas fluorescens ATCC 23728 | 1 |
| Pseudomonas fluorescens BL915 | 1 |
| Pseudomonas fluorescens DSM 8341 | 1 |
| Pseudomonas fluorescens I-C | 1 |
| Pseudomonas fluorescens KU-7 | 1 |
| Pseudomonas fluorescens NCIMB 10586 | 1 |
| Pseudomonas fluorescens Pf0-1 | 3 |
| Pseudomonas fluorescens SK1 | 1 |
| Pseudomonas fluorescens ST | 1 |
| Pseudomonas fluorescens TN5 | 1 |
| Pseudomonas fragi | 4 |
| Pseudomonas hydrogenovora | 1 |
| Pseudomonas knackmussii | 6 |
| Pseudomonas LD2 | 1 |
| Pseudomonas mendocina | 4 |
| Pseudomonas mendocina (pWWO) or (pTOL) | 2 |
| Pseudomonas mevalonii | 2 |
| Pseudomonas moorei | 1 |
| Pseudomonas nitroreducens | 5 |
| Pseudomonas nitroreducens J5-1 | 1 |
| Pseudomonas oleovorans | 5 |
| Pseudomonas protegens Pf-5 | 5 |
| Pseudomonas putida | 51 |
| Pseudomonas putida 1290 | 1 |
| Pseudomonas putida 40 | 1 |
| Pseudomonas putida 77 | 2 |
| Pseudomonas putida AC866 | 3 |
| Pseudomonas putida ATCC 17453 | 4 |
| Pseudomonas putida ATCC 17484 | 1 |
| Pseudomonas putida B2 | 1 |
| Pseudomonas putida C1 | 1 |
| Pseudomonas putida CBB5 | 3 |
| Pseudomonas putida DLL-E4 | 1 |
| Pseudomonas putida DS1 | 1 |
| Pseudomonas putida F1 | 4 |
| Pseudomonas putida GB-1 | 3 |
| Pseudomonas putida GJ31 | 1 |
| Pseudomonas putida GPo1 | 1 |
| Pseudomonas putida H262 | 1 |
| Pseudomonas putida HS12 | 2 |
| Pseudomonas putida II-B | 1 |
| Pseudomonas putida J | 1 |
| Pseudomonas putida JD1 | 1 |
| Pseudomonas putida JS444 | 1 |
| Pseudomonas putida KD6 | 1 |
| Pseudomonas putida KL47 | 1 |
| Pseudomonas putida KT2440 | 9 |
| Pseudomonas putida KT2442 | 1 |
| Pseudomonas putida mt-2 | 10 |
| Pseudomonas putida N-9 | 1 |
| Pseudomonas putida NCIB 9869 | 2 |
| Pseudomonas putida NCIMB 9866 | 2 |
| Pseudomonas putida No. 352 | 1 |
| pseudomonas putida NP | 1 |
| Pseudomonas putida O1 | 1 |
| Pseudomonas putida ORC | 2 |
| Pseudomonas putida P35X | 1 |
| Pseudomonas putida PDC | 1 |
| Pseudomonas putida PL-W | 1 |
| Pseudomonas putida PpG7 | 2 |
| Pseudomonas putida S16 | 1 |
| Pseudomonas putida SQ1 | 1 |
| Pseudomonas putida strain PaWl | 1 |
| Pseudomonas putida T | 1 |
| Pseudomonas putida TG2T | 1 |
| Pseudomonas putida TW3 | 4 |
| Pseudomonas putida U | 4 |
| Pseudomonas putida UCC22 | 1 |
| Pseudomonas putida WS | 1 |
| Pseudomonas putida ZWL73 | 1 |
| Pseudomonas reinekei | 6 |
| Pseudomonas rhodesiae | 1 |
| Pseudomonas savastanoi | 1 |
| Pseudomonas savastanoi pv. glycinea | 1 |
| Pseudomonas savastanoi pv. phaseolicola | 2 |
| Pseudomonas simiae | 1 |
| Pseudomonas sp | 6 |
| Pseudomonas sp GU5 | 1 |
| Pseudomonas sp. 1-7 | 2 |
| Pseudomonas sp. 7B | 1 |
| Pseudomonas sp. A3 | 2 |
| Pseudomonas sp. ADP | 2 |
| Pseudomonas sp. AK-1 | 2 |
| Pseudomonas sp. AP3 | 1 |
| Pseudomonas sp. ATCC 17483 | 1 |
| Pseudomonas sp. B<sub>2</sub>aba | 1 |
| Pseudomonas sp. C5pp | 2 |
| Pseudomonas sp. C6 (2012) | 1 |
| Pseudomonas sp. CA10 | 2 |
| Pseudomonas sp. CBB1 | 1 |
| Pseudomonas sp. CBS3 | 1 |
| Pseudomonas sp. CF600 | 3 |
| Pseudomonas sp. ENV2030 | 1 |
| Pseudomonas sp. gs1 | 2 |
| Pseudomonas sp. HH69 | 1 |
| Pseudomonas sp. HR199 | 2 |
| Pseudomonas sp. HZN6 | 1 |
| Pseudomonas sp. K-62 | 1 |
| Pseudomonas Sp. K172 | 2 |
| Pseudomonas sp. KB 740 | 2 |
| Pseudomonas sp. KIE171 | 1 |
| Pseudomonas sp. MA-1 | 1 |
| Pseudomonas sp. MG61 | 1 |
| Pseudomonas sp. ML2 | 1 |
| Pseudomonas sp. MS | 1 |
| Pseudomonas sp. NCIB 10590 | 1 |
| Pseudomonas sp. NCIB 8858 | 2 |
| Pseudomonas sp. NCIB9816-4 | 3 |
| Pseudomonas sp. NCIMB 10558 | 1 |
| Pseudomonas sp. NT4 | 3 |
| Pseudomonas sp. NyZ402 | 1 |
| Pseudomonas sp. P<sub>G</sub> | 1 |
| Pseudomonas sp. P.J. 874 | 1 |
| Pseudomonas sp. P51 | 7 |
| Pseudomonas Sp. PB16 | 1 |
| Pseudomonas sp. PL | 1 |
| Pseudomonas sp. PS14 | 3 |
| Pseudomonas sp. Ps7 | 1 |
| Pseudomonas sp. SG-MS2 | 1 |
| Pseudomonas sp. strain VM15C | 1 |
| Pseudomonas sp. TPU 7192 | 1 |
| Pseudomonas sp. VLB120 | 1 |
| Pseudomonas sp. WBC-3 | 2 |
| Pseudomonas sp. Y2 | 1 |
| Pseudomonas sp. YL | 1 |
| Pseudomonas straminea | 1 |
| Pseudomonas stutzeri | 6 |
| Pseudomonas stutzeri AN10 | 2 |
| Pseudomonas stutzeri ZWLR2-1 | 1 |
| Pseudomonas syringae | 7 |
| Pseudomonas syringae pv. syringae | 1 |
| Pseudomonas syringae pv. syringae B728a | 1 |
| Pseudomonas taiwanensis | 1 |
| Pseudomonas teessidea | 1 |
| Pseudomonas veronii 16-6A | 1 |
| Pseudonocardia autotrophica | 1 |
| Pseudonocardia sp. P1 | 1 |
| Pseudooceanicola batsensis HTCC2597 | 1 |
| Psilocybe cubensis | 1 |
| Psilocybe cyanescens | 1 |
| Psilotum nudum | 1 |
| Psychrobacillus insolitus | 2 |
| Psychrobacter urativorans | 1 |
| Psychroflexus torquis ATCC 700755 | 1 |
| Psychromonas ingrahamii | 1 |
| Psychromonas ingrahamii 37 | 1 |
| Pteris vittata | 1 |
| Puccinia coronata avenae f. sp. avenae | 1 |
| Pucciniastrum boehmeriae | 1 |
| Pueraria montana lobata | 5 |
| Punica granatum | 1 |
| Pyricularia oryzae | 1 |
| Pyrobaculum | 1 |
| Pyrobaculum aerophilum | 3 |
| Pyrobaculum arsenaticum | 1 |
| Pyrobaculum calidifontis | 3 |
| Pyrobaculum islandicum | 3 |
| Pyrobaculum neutrophilum | 2 |
| Pyrobaculum neutrophilum V24Sta | 1 |
| Pyrococcus abyssi | 5 |
| Pyrococcus furiosus | 15 |
| Pyrococcus furiosus DSM 3638 | 1 |
| Pyrococcus horikoshii | 13 |
| Pyrococcus sp. ST04 | 1 |
| Pyrococcus woesei | 2 |
| Pyrocystis fusiformis | 1 |
| Pyrocystis lunula | 1 |
| Pyrocystis noctiluca | 1 |
| Pyrodictium abyssi | 1 |
| Pyrodictium brockii | 1 |
| Pyrolobus fumarii | 1 |
| Pyrus pyrifolia | 1 |
| Pythium irregulare | 1 |
| Quercus robur | 2 |
| Quercus rubra | 1 |
| Ralstonia eutropha JMP222 | 3 |
| Ralstonia eutropha NH9 | 2 |
| Ralstonia pickettii | 6 |
| Ralstonia pickettii LD1 | 1 |
| Ralstonia solanacearum | 6 |
| Ralstonia sp. EDS1 | 1 |
| Ralstonia sp. JS668 | 2 |
| Ralstonia sp. T6 | 1 |
| Ralstonia sp. U2 | 3 |
| Raoultella planticola | 1 |
| Raoultella terrigena | 3 |
| Raphanus sativus | 4 |
| Raphidiopsis curvata | 1 |
| Rathayibacter iranicus | 2 |
| Rathayibacter tritici | 2 |
| Rattus | 1 |
| Rattus norvegicus | 86 |
| Rauvolfia serpentina | 2 |
| Rebecca salina | 3 |
| Renibacterium salmoninarum | 1 |
| Renilla muelleri | 1 |
| Renilla reniformis | 1 |
| Rheum palmatum | 2 |
| Rheum tataricum | 1 |
| Rhizobiaceae | 4 |
| Rhizobium etli | 1 |
| Rhizobium leguminosarum | 6 |
| Rhizobium leguminosarum bv. phaseoli | 1 |
| Rhizobium leguminosarum bv. trifolii | 2 |
| Rhizobium leguminosarum bv. viciae | 2 |
| Rhizobium leguminosarum bv. viciae 3841 | 1 |
| Rhizobium phaseoli | 2 |
| Rhizobium sp. MTP-10005 | 1 |
| Rhizobium tropici | 1 |
| Rhizophora apiculata | 1 |
| Rhizophora mangle | 1 |
| Rhizophora stylosa | 3 |
| Rhizophoraceae | 1 |
| Rhodiola rosea | 1 |
| Rhodiola sachalinensis | 1 |
| Rhodobacter capsulatus | 18 |
| Rhodobacter capsulatus SB 1003 | 1 |
| Rhodobacter sphaeroides | 18 |
| Rhodobacter sphaeroides 2.4.1 | 5 |
| Rhodobacter sphaeroides ATCC 17029 | 1 |
| Rhodococcus <high GC Gram+> | 1 |
| Rhodococcus corynebacterioides | 1 |
| Rhodococcus erythropolis | 5 |
| Rhodococcus erythropolis DCL14 | 4 |
| Rhodococcus erythropolis JCM 6824 | 1 |
| Rhodococcus erythropolis MI2 | 1 |
| Rhodococcus erythropolis XP | 1 |
| Rhodococcus fascians | 1 |
| Rhodococcus globerulus | 1 |
| Rhodococcus hoagii | 5 |
| Rhodococcus hoagii 103S | 3 |
| Rhodococcus jostii RHA1 | 7 |
| Rhodococcus N-774 | 1 |
| Rhodococcus opacus | 7 |
| Rhodococcus opacus 1CP | 1 |
| Rhodococcus opacus GM-14 | 1 |
| Rhodococcus opacus HL PM-1 | 1 |
| Rhodococcus opacus SAO101 | 1 |
| Rhodococcus percolatus | 1 |
| Rhodococcus rhodnii | 1 |
| Rhodococcus rhodochrous | 11 |
| Rhodococcus ruber | 3 |
| Rhodococcus sp | 1 |
| Rhodococcus sp. AD45 | 1 |
| Rhodococcus sp. C1 | 1 |
| Rhodococcus sp. IGTS8 | 1 |
| Rhodococcus sp. N-771 | 1 |
| Rhodococcus sp. NCIMB 12038 | 2 |
| Rhodococcus sp. PN1 | 1 |
| Rhodococcus sp. SQ1 | 2 |
| Rhodococcus sp. strain MS11 | 2 |
| Rhodococcus sp. strain SY1 | 1 |
| Rhodococcus sp. TE1 | 1 |
| Rhodococcus sp. TMP1 | 1 |
| Rhodococcus YH3-3 | 3 |
| Rhododendron dauricum | 1 |
| Rhodomicrobium vannielii | 3 |
| Rhodophiala bifida bifida | 1 |
| Rhodopirellula baltica | 1 |
| Rhodopseudomonas palustris | 12 |
| Rhodopseudomonas palustris BisB5 | 1 |
| Rhodopseudomonas palustris CGA009 | 5 |
| Rhodopseudomonas palustris DSM 123 | 1 |
| Rhodopseudomonas palustris TIE-1 | 1 |
| Rhodospirillum rubrum | 14 |
| Rhodothermus marinus | 2 |
| Rhodotorula glutinis | 2 |
| Rhodovulum sulfidophilum | 2 |
| Rhus typhina | 2 |
| Rhyparobia maderae | 1 |
| Ribes nigrum | 1 |
| Ricinus communis | 14 |
| Rickettsia prowazekii | 1 |
| Rickettsia prowazekii Madrid E | 1 |
| Robbsia andropogonis | 1 |
| Robinia pseudoacacia | 1 |
| Roccella tinctoria | 1 |
| Rosa | 1 |
| Rosa chinensis | 3 |
| Rosa hybrid cultivar | 9 |
| Rosales | 1 |
| Roseiflexus castenholzii | 2 |
| Roseiflexus sp. RS-1 | 1 |
| Roseovarius nubinhibens ISM | 4 |
| Rubia tinctorum | 2 |
| Rubrivivax gelatinosus | 14 |
| Rubrobacter xylanophilus | 2 |
| Rubus idaeus | 2 |
| Rubus idaeus strigosus | 1 |
| Rudbeckia hirta | 1 |
| Ruegeria atlantica | 1 |
| ruegeria frisia | 1 |
| Ruegeria pomeroyi | 1 |
| Ruegeria pomeroyi DSS-3 | 7 |
| Ruminiclostridium cellulolyticum | 2 |
| Ruminiclostridium josui | 2 |
| Ruminiclostridium papyrosolvens | 2 |
| Ruminococcus albus | 2 |
| Ruminococcus albus 7 = DSM 20455 | 1 |
| Ruminococcus albus 8 | 1 |
| Ruminococcus albus NE1 | 1 |
| Ruminococcus gnavus N53 | 1 |
| Ruminococcus sp. PO1-3 | 1 |
| Ruta graveolens | 3 |
| Saccharolobus shibatae | 1 |
| Saccharolobus solfataricus | 24 |
| Saccharolobus solfataricus 98/2 | 1 |
| Saccharolobus solfataricus P2 | 3 |
| Saccharomyces cerevisiae | 197 |
| Saccharomyces cerevisiae S288C | 9 |
| Saccharomyces chevalieri | 1 |
| Saccharopolyspora | 1 |
| Saccharopolyspora erythraea | 3 |
| Saccharopolyspora erythraea NRRL 2338 | 5 |
| Saccharopolyspora rectivirgula | 1 |
| Saccharopolyspora spinosa | 3 |
| Saccharum officinarum | 2 |
| Sagittula stellata E-37 | 1 |
| Salinispora arenicola | 2 |
| Salinispora tropica | 1 |
| Salinivibrio costicola | 4 |
| Salipiger bermudensis HTCC2601 | 1 |
| Salmonella enterica | 3 |
| Salmonella enterica enterica serovar Adelaide | 1 |
| Salmonella enterica enterica serovar Agona | 2 |
| Salmonella enterica enterica serovar Paratyphi A | 1 |
| Salmonella enterica enterica serovar Paratyphi B | 1 |
| Salmonella enterica enterica serovar Paratyphi C | 1 |
| Salmonella enterica enterica serovar Typhi | 5 |
| Salmonella enterica enterica serovar Typhimurium | 48 |
| Salmonella enterica enterica serovar Typhimurium str. 14028S | 2 |
| Salmonella enterica enterica serovar Typhimurium str. LT2 | 10 |
| Salmonella enterica O54 | 1 |
| Salvia fruticosa | 1 |
| Salvia hispanica | 1 |
| Salvia officinalis | 3 |
| Salvia rosmarinus | 1 |
| Salvia splendens | 2 |
| Salvia stenophylla | 1 |
| Sandaracinus amylolyticus | 1 |
| Sandarakinorhabdus limnophila | 1 |
| Sander vitreus | 1 |
| Sanguinaria canadensis | 2 |
| Santalum album | 2 |
| Santalum austrocaledonicum | 1 |
| Santalum spicatum | 1 |
| Saturnispora diversa | 1 |
| Saturnispora silvae | 1 |
| Sauromatum venosum | 1 |
| Saussurea medusa | 2 |
| Scapharca broughtonii | 1 |
| Sceloporus jarrovii | 1 |
| Scheffersomyces stipitis CBS 6054 | 1 |
| Schistocerca gregaria | 1 |
| Schizochytrium sp. ATCC 20888 | 1 |
| Schizonepeta tenuifolia | 1 |
| Schizophyllum commune | 1 |
| Schizosaccharomyces pombe | 6 |
| Schizosaccharomyces pombe 972h- | 1 |
| Sclerotinia sclerotiorum | 1 |
| Scutellaria baicalensis | 3 |
| Scutellaria viscidula | 1 |
| Scytonema sp | 1 |
| Secale cereale | 9 |
| Selenomonas ruminantium | 2 |
| Senecio | 1 |
| Senecio vernalis | 1 |
| Senecio vulgaris | 1 |
| Septoria lycopersici | 1 |
| Serratia liquefaciens | 1 |
| Serratia marcescens | 12 |
| Serratia marcescens H30 | 1 |
| Serratia plymuthica | 4 |
| Serratia plymuthica 4Rx13 | 1 |
| Serratia proteamaculans 568 | 1 |
| Serratia sp. DS001 | 1 |
| Sesamum alatum | 1 |
| Sesamum indicum | 3 |
| Sesamum radiatum | 2 |
| Sesbania rostrata | 2 |
| Setaria italica | 1 |
| Setophoma sacchari | 1 |
| Shanorella spirotricha | 1 |
| Shewanella algae | 1 |
| Shewanella amazonensis SB2B | 1 |
| Shewanella denitrificans | 1 |
| Shewanella denitrificans OS217 | 1 |
| Shewanella hanedai | 1 |
| Shewanella oneidensis | 3 |
| Shewanella oneidensis MR-1 | 7 |
| Shewanella pneumatophori | 1 |
| Shewanella putrefaciens | 4 |
| Shewanella putrefaciens 200 | 1 |
| Shewanella sp. ANA-3 | 3 |
| Shewanella sp. GA-22 | 1 |
| Shewanella sp. MR-4 | 2 |
| Shewanella sp. MR-7 | 2 |
| Shigella boydii | 1 |
| Shigella flexneri | 1 |
| Shinella sp. HZN7 | 1 |
| Silene dioica | 3 |
| Silene latifolia | 2 |
| Silene latifolia alba | 1 |
| Simmondsia chinensis | 2 |
| Sinapis alba | 1 |
| Sinningia cardinalis | 2 |
| Sinomonas atrocyanea | 3 |
| Sinopodophyllum hexandrum | 3 |
| Sinorhizobium fredii | 2 |
| Sinorhizobium fredii NGR234 | 3 |
| Sinorhizobium meliloti | 16 |
| Sinorhizobium meliloti 1021 | 9 |
| Sinorhizobium meliloti Rm2011 | 12 |
| Sipunculus nudus | 1 |
| Slackia isoflavoniconvertens | 1 |
| Slackia sp. NATTS | 1 |
| Slafractonia leguminicola | 1 |
| Solanum | 1 |
| Solanum aculeatissimum | 1 |
| Solanum habrochaites | 9 |
| Solanum habrochaites 1731 | 1 |
| Solanum habrochaites 1777 | 1 |
| Solanum habrochaites 2098 | 1 |
| Solanum habrochaites 2861 | 1 |
| Solanum lycopersicum | 67 |
| Solanum melongena | 1 |
| Solanum pennellii | 4 |
| Solanum tuberosum | 47 |
| Solidago canadensis | 2 |
| Sophora flavescens | 1 |
| Sorbus aucuparia | 2 |
| Sorghum bicolor | 7 |
| Spartina | 1 |
| Sphaerobacter | 1 |
| Sphingobacterium mizutaii | 1 |
| Sphingobium chlorophenolicum | 2 |
| Sphingobium fuliginis | 2 |
| Sphingobium japonicum | 1 |
| Sphingobium japonicum BiD32 | 1 |
| Sphingobium sp. SYK-6 | 1 |
| Sphingobium sp. UG30 | 1 |
| Sphingomonas astaxanthinifaciens | 1 |
| Sphingomonas elodea | 1 |
| Sphingomonas lacus | 1 |
| Sphingomonas paucimobilis | 1 |
| Sphingomonas sp. A1 | 1 |
| Sphingomonas sp. CB3 | 1 |
| Sphingomonas sp. PH-07 | 1 |
| Sphingomonas sp. SKA58 | 1 |
| Sphingomonas sp. SS3 | 1 |
| Sphingomonas sp. SYK6 | 9 |
| Sphingomonas sp. XLDN2-5 | 1 |
| Sphingomonas wittichii RW1 | 3 |
| Sphingopyxis sp. 113P3 | 1 |
| Sphinx ligustri | 1 |
| Spinacia oleracea | 29 |
| Spirodela polyrhiza | 1 |
| Spiroplasma citri | 1 |
| Spodoptera | 1 |
| Spodoptera littoralis | 3 |
| Sporobolus alterniflorus | 2 |
| Sporolactobacillus inulinus | 2 |
| Sporomusa malonica | 1 |
| Sporomusa ovata | 2 |
| Sporomusa silvacetica | 1 |
| Sporomusa termitida | 1 |
| Sporosarcina globispora | 1 |
| Sporosarcina pasteurii | 3 |
| Sporosarcina ureae | 3 |
| Staphylococcus aureus | 21 |
| Staphylococcus aureus aureus | 1 |
| Staphylococcus aureus aureus ATCC 25923 | 2 |
| Staphylococcus aureus aureus KCTC 1928 | 1 |
| Staphylococcus aureus aureus N315 | 1 |
| Staphylococcus aureus aureus NCTC 8325 | 1 |
| Staphylococcus capitis | 3 |
| Staphylococcus cohnii | 2 |
| Staphylococcus epidermidis | 3 |
| Staphylococcus haemolyticus | 3 |
| Staphylococcus hominis | 2 |
| Staphylococcus lentus | 2 |
| Staphylococcus pseudintermedius | 1 |
| Staphylococcus saprophyticus | 2 |
| Staphylococcus sciuri | 1 |
| Staphylococcus sciuri sciuri | 2 |
| Staphylococcus simulans | 2 |
| Staphylococcus warneri | 3 |
| Staphylococcus xylosus | 2 |
| Staphylothermus marinus | 2 |
| Starkeya novella | 5 |
| Starmera amethionina | 1 |
| Starmera caribaea | 1 |
| Starmerella bombicola | 1 |
| Starmerella lactis-condensi | 1 |
| Starmerella stellata | 1 |
| Stellaria media | 2 |
| Stemphylium loti | 1 |
| Stenotrophomonas maltophilia | 8 |
| Stenotrophomonas sp. G1 | 1 |
| Stephanurus dentatus | 1 |
| Sterculia foetida | 1 |
| Stetteria hydrogenophila | 1 |
| Stevia rebaudiana | 2 |
| Stigmatella aurantiaca | 3 |
| Stigmatella aurantiaca Sg a15 | 1 |
| Streptoalloteichus tenebrarius | 1 |
| Streptococcus | 1 |
| Streptococcus agalactiae | 7 |
| Streptococcus agalactiae NEM316 | 1 |
| Streptococcus equinus | 1 |
| Streptococcus mutans | 5 |
| Streptococcus oralis | 1 |
| Streptococcus pasteurianus | 2 |
| Streptococcus pneumoniae | 14 |
| Streptococcus pneumoniae 23F | 1 |
| Streptococcus pneumoniae R6 | 1 |
| Streptococcus pyogenes | 2 |
| Streptococcus ratti | 1 |
| Streptococcus salivarius | 2 |
| Streptococcus sanguinis | 2 |
| Streptococcus thermophilus | 3 |
| Streptococcus uberis | 1 |
| Streptomyces | 5 |
| Streptomyces achromogenes rubradiris | 1 |
| Streptomyces actuosus | 1 |
| Streptomyces aizunenesis NRRL-B-11277 | 1 |
| Streptomyces albidoflavus | 1 |
| Streptomyces alboniger | 1 |
| Streptomyces albus | 2 |
| Streptomyces ambofaciens ATCC 23877 | 1 |
| Streptomyces antibioticus | 8 |
| Streptomyces anulatus | 2 |
| Streptomyces arenae | 1 |
| Streptomyces argillaceus | 2 |
| Streptomyces arginensis | 2 |
| Streptomyces avermitilis | 7 |
| Streptomyces avermitilis MA-4680 = NBRC 14893 | 1 |
| Streptomyces bikiniensis | 3 |
| Streptomyces caespitosus | 1 |
| Streptomyces cattleya | 1 |
| Streptomyces chartreusis | 1 |
| Streptomyces chrestomyceticus | 2 |
| Streptomyces cinnabarinus | 1 |
| Streptomyces clavuligerus | 7 |
| Streptomyces coelicolor | 7 |
| Streptomyces coelicolor A3(2) | 11 |
| Streptomyces collinus | 4 |
| Streptomyces davaonensis | 1 |
| Streptomyces diastatochromogenes | 1 |
| Streptomyces echinatus | 1 |
| Streptomyces exfoliatus | 1 |
| Streptomyces felleus | 1 |
| Streptomyces flaveolus | 2 |
| Streptomyces flavochromogenes | 1 |
| Streptomyces fradiae | 8 |
| Streptomyces galbus | 1 |
| Streptomyces galilaeus | 1 |
| Streptomyces gardneri | 1 |
| Streptomyces garyphalus | 1 |
| Streptomyces glaucescens | 1 |
| Streptomyces griseochromogenes | 1 |
| Streptomyces griseosporeus | 1 |
| Streptomyces griseovariabilis bandungensis | 2 |
| Streptomyces griseus | 15 |
| Streptomyces griseus griseus NBRC 13350 | 2 |
| Streptomyces hygroscopicus | 5 |
| Streptomyces hygroscopicus 10-22 | 1 |
| Streptomyces hygroscopicus ATCC 21705 | 1 |
| Streptomyces hygroscopicus jinggangensis | 1 |
| Streptomyces hygroscopicus jinggangensis 5008 | 1 |
| Streptomyces hygroscopicus limoneus | 1 |
| Streptomyces kanamyceticus | 1 |
| Streptomyces lasaliensis | 2 |
| Streptomyces lasaliensis NRRL3382R | 1 |
| Streptomyces lavendulae | 3 |
| Streptomyces lavendulae lavendulae | 1 |
| Streptomyces leeuwenhoekii | 1 |
| Streptomyces lincolnensis | 1 |
| Streptomyces lividans | 1 |
| Streptomyces lividus | 1 |
| Streptomyces longisporoflavus | 1 |
| Streptomyces luridus | 1 |
| Streptomyces lysosuperificus | 1 |
| Streptomyces maritimus | 3 |
| Streptomyces mediolani | 1 |
| Streptomyces melanosporofaciens | 1 |
| Streptomyces morookaense | 1 |
| Streptomyces mycarofaciens | 1 |
| Streptomyces narbonensis | 1 |
| Streptomyces nodosus asukaensis | 1 |
| Streptomyces noursei ATCC 11455 | 1 |
| Streptomyces odorifer | 1 |
| Streptomyces olivaceus | 2 |
| Streptomyces orinoci | 1 |
| Streptomyces ornatus | 1 |
| Streptomyces parvulus | 2 |
| Streptomyces peucetius | 2 |
| Streptomyces peucetius caesius | 3 |
| Streptomyces peucetius caesius ATCC 27952 | 1 |
| Streptomyces pilosus | 2 |
| Streptomyces platensis | 1 |
| Streptomyces ravidus | 1 |
| Streptomyces ribosidificus | 1 |
| Streptomyces rimosus | 6 |
| Streptomyces rimosus rimosus ATCC 10970 | 2 |
| Streptomyces rishiriensis | 2 |
| Streptomyces rochei | 1 |
| Streptomyces roseochromogenus oscitans | 3 |
| Streptomyces roseogriseus | 1 |
| Streptomyces rubellomurinus | 1 |
| Streptomyces scabiei 87.22 | 1 |
| Streptomyces somaliensis | 1 |
| Streptomyces sp. AC7 | 1 |
| Streptomyces sp. C5 | 1 |
| Streptomyces sp. CS | 1 |
| Streptomyces sp. FR-008 | 2 |
| Streptomyces sp. K01-0509 | 1 |
| Streptomyces sp. K30 | 1 |
| Streptomyces sp. KCTC 0041BP | 1 |
| Streptomyces sp. MM23 | 1 |
| Streptomyces sp. SA-COO | 2 |
| Streptomyces sp. SNA15896 | 1 |
| Streptomyces sp. strain V-1 | 1 |
| Streptomyces sp. TP-A0274 | 1 |
| Streptomyces sp. WA46 | 2 |
| Streptomyces sp. XZQH13 | 2 |
| Streptomyces spectabilis | 3 |
| Streptomyces spiralis | 1 |
| Streptomyces thioluteus | 1 |
| Streptomyces triostinicus | 2 |
| Streptomyces venezuelae | 4 |
| Streptomyces venezuelae ATCC 10712 | 2 |
| Streptomyces verticillus | 1 |
| Streptomyces violaceochromogenes | 1 |
| Streptomyces virginiae | 1 |
| Streptomyces viridochromogenes | 1 |
| Streptomyces viridochromogenes DSM 40736 | 1 |
| Streptomyces wedmorensis | 1 |
| Streptomyces zaomyceticus | 1 |
| Streptosporangium sibiricum | 1 |
| Strobilanthes cusia | 2 |
| Stygiolobus azoricus | 1 |
| Suberites domuncula | 1 |
| Suillus grevillei | 1 |
| Sulfitobacter | 1 |
| Sulfitobacter pontiacus | 1 |
| Sulfitobacter sp. EE-36 | 1 |
| Sulfitobacter sp. NAS-14.1 | 1 |
| Sulfobacillus thermosulfidooxidans | 1 |
| Sulfolobus acidocaldarius | 8 |
| Sulfolobus acidocaldarius DSM 639 | 2 |
| Sulfolobus islandicus | 1 |
| Sulfuricella denitrificans | 1 |
| Sulfuriferula plumbiphila | 1 |
| Sulfurimonas denitrificans | 1 |
| Sulfurisphaera tokodaii | 9 |
| Sulfurisphaera tokodaii 7 | 2 |
| Sulfurospirillum arcachonense | 1 |
| Sulfurospirillum arsenophilum | 1 |
| Sulfurospirillum barnesii | 1 |
| Sulfurospirillum deleyianum | 1 |
| Sulfurospirillum multivorans | 1 |
| Sus scrofa | 20 |
| Symbiobacterium thermophilum | 1 |
| symbiont bacterium of Paederus fuscipes | 1 |
| Synechococcus elongatus | 4 |
| Synechococcus elongatus PCC 6301 | 2 |
| Synechococcus elongatus PCC 7942 | 13 |
| Synechococcus nidulans | 1 |
| Synechococcus sp. PCC 7002 | 12 |
| Synechococcus sp. PCC 7335 | 1 |
| Synechococcus sp. RS9916 | 2 |
| Synechococcus sp. WH 8020 | 1 |
| Synechococcus sp. WH 8102 | 5 |
| Synechocystis | 5 |
| Synechocystis sp. PCC 6803 | 39 |
| Synechocystis sp. PCC 6803 substr. Kazusa | 1 |
| Syngamus trachea | 1 |
| Syntrophococcus sucromutans | 1 |
| Syntrophomonas wolfei | 1 |
| Syntrophus aciditrophicus | 1 |
| Syntrophus buswellii | 1 |
| Syntrophus gentianae | 1 |
| Syzygium aromaticum | 1 |
| Tagetes erecta | 1 |
| Tagetes patula | 1 |
| Talaromyces stipitatus | 1 |
| Tanacetum balsamita | 1 |
| Tanacetum cinerariifolium | 1 |
| Tanacetum parthenium | 2 |
| Tanacetum vulgare | 1 |
| Tannerella forsythia | 1 |
| Taphrina deformans | 1 |
| Taphrina pruni | 1 |
| Taphrina wiesneri | 1 |
| Tapinella panuoides | 1 |
| Taraxacum kok-saghyz | 1 |
| Taxus baccata | 1 |
| Taxus brevifolia | 1 |
| Taxus canadensis | 1 |
| Taxus chinensis | 1 |
| Taxus cuspidata | 2 |
| Taxus x media | 1 |
| Tecoma stans | 1 |
| Teleostei | 1 |
| Tellima grandiflora | 1 |
| Telluria mixta | 1 |
| Tephrosia vogelii | 1 |
| Terrabacter sp. DPO360 | 1 |
| Tetradesmus obliquus | 1 |
| Tetragenococcus koreensis | 1 |
| Tetragenococcus muriaticus | 1 |
| Tetrahymena pyriformis | 5 |
| Tetrahymena thermophila | 1 |
| Tetraselmis | 1 |
| Thalassiosira pseudonana | 1 |
| Thalassiosira pseudonana CCMP1335 | 1 |
| Thalictrum bulgaricum | 1 |
| Thalictrum flavum | 3 |
| Thalictrum flavum glaucum | 1 |
| Thalictrum tuberosum | 1 |
| Thauera aromatica | 8 |
| Thauera butanivorans | 2 |
| Thaumarchaeota archaeon | 1 |
| Theobroma cacao | 1 |
| Thermacetogenium phaeum DSM 12270 | 1 |
| Thermincola potens JR | 1 |
| Thermithiobacillus tepidarius | 2 |
| Thermoanaerobacter brockii | 2 |
| Thermoanaerobacter pseudethanolicus | 1 |
| Thermoanaerobacterium saccharolyticum | 1 |
| Thermoanaerobacterium thermosaccharolyticum | 2 |
| Thermoascus | 1 |
| Thermoascus aurantiacus | 1 |
| Thermoascus crustaceus | 1 |
| Thermobaculum | 1 |
| Thermobifida fusca | 2 |
| Thermococcus celer | 1 |
| Thermococcus gammatolerans | 1 |
| Thermococcus kodakarensis | 9 |
| Thermococcus kodakarensis KOD1 | 5 |
| Thermococcus litoralis | 3 |
| Thermococcus onnurineus | 1 |
| Thermococcus onnurineus NA1 | 1 |
| Thermococcus sp. B1001 | 1 |
| Thermococcus stetteri | 1 |
| Thermodesulfobacterium commune | 2 |
| Thermodesulforhabdus norvegica | 1 |
| Thermodesulfovibrio yellowstonii | 1 |
| Thermofilum pendens | 1 |
| Thermogladius calderae | 1 |
| Thermomicrobium | 1 |
| Thermoplasma acidophilum | 7 |
| Thermoplasma volcanium | 1 |
| Thermoproteus | 1 |
| Thermoproteus tenax | 5 |
| Thermoproteus uzoniensis | 1 |
| Thermosipho melanesiensis | 1 |
| Thermosphaera aggregans | 1 |
| Thermosynechococcus elongatus | 1 |
| Thermosynechococcus elongatus BP-1 | 4 |
| Thermotoga maritima | 19 |
| Thermotoga neapolitana | 2 |
| Thermus aquaticus | 7 |
| Thermus caldophilus | 1 |
| Thermus thermophilus | 10 |
| Thermus thermophilus HB8 | 5 |
| Thioalkalicoccus limnaeus | 1 |
| Thioalkalivibrio paradoxus | 1 |
| Thioalkalivibrio paradoxus ARh 1 | 1 |
| Thioalkalivibrio thiocyanodenitrificans | 1 |
| Thioalkalivibrio thiocyanoxidans | 1 |
| Thioalkalivibrio thiocyanoxidans ARh 4 | 2 |
| Thiobacillus denitrificans | 3 |
| Thiobacillus sp. W5 | 3 |
| Thiobacillus thioparus | 10 |
| Thiobacillus thioparus T5 | 1 |
| Thiobacillus thioparus THI 115 | 1 |
| Thiobacillus thioparus TK-m | 2 |
| Thiocapsa marina | 1 |
| Thiocapsa roseopersicina | 2 |
| Thiocapsa roseopersicina M11 | 1 |
| Thiococcus pfennigii | 1 |
| Thioflavicoccus mobilis | 1 |
| Thiohalophilus thiocyanatoxydans | 1 |
| Thiomonas delicata | 1 |
| Thiothrix ramosa | 1 |
| Thraustochytrium sp. ATCC21685 | 1 |
| Thuja plicata | 1 |
| Thunbergia alata | 2 |
| Tilletia caries | 1 |
| Tissierella creatinini | 1 |
| Tissierella creatinophila | 1 |
| Todarodes pacificus | 1 |
| Toxicodendron vernicifluum | 1 |
| Toxoplasma gondii | 1 |
| Toxoplasma gondii ME49 | 1 |
| Toxoplasma gondii RH | 1 |
| Treponema denticola | 4 |
| Treponema pallidum | 2 |
| Treponema phagedenis | 1 |
| Treponema vincentii | 1 |
| Trichinella spiralis | 1 |
| Trichoderma arundinaceum | 2 |
| Trichoderma brevicompactum | 2 |
| Trichoderma harzianum | 1 |
| Trichoderma reesei | 10 |
| Trichoderma reesei QM9414 | 1 |
| Trichoderma viride | 2 |
| Trichodesmium erythraeum | 2 |
| Trichomonas vaginalis | 2 |
| Trichophyton benhamiae | 2 |
| Trichophyton mentagrophytes | 1 |
| Trichophyton simii | 1 |
| Trichormus variabilis | 10 |
| Trichormus variabilis ATCC 29413 | 3 |
| Trichosanthes kirilowii | 1 |
| Trichosporon moniliiforme WU-0401 | 1 |
| Trifolium incarnatum | 1 |
| Trifolium pratense | 5 |
| Trifolium repens | 1 |
| Triglochin maritima | 3 |
| Trigonella foenum-graecum | 1 |
| Triticum aestivum | 26 |
| Triticum spelta | 1 |
| Tritrichomonas suis | 1 |
| Trypanosoma brucei | 2 |
| Trypanosoma brucei brucei | 1 |
| Trypanosoma cruzi | 2 |
| Trypanosoma vivax | 1 |
| Tsukamurella paurometabola | 3 |
| Tyria jacobaeae | 1 |
| Ulva curvata | 1 |
| Ulva intestinalis | 1 |
| Ulva lactuca | 1 |
| Umezakia natans | 1 |
| Uncinocarpus reesii | 1 |
| uncultured bacterium HF130_AEPn_1 | 1 |
| unidentified bacterium BIS-6 | 1 |
| unidentified bacterium DG-C1 | 1 |
| unidentified bacterium MM-P | 1 |
| Urochloa panicoides | 1 |
| Ustilago cynodontis | 2 |
| Ustilago hordei | 1 |
| Ustilago maydis | 6 |
| Ustilago nuda | 1 |
| Ustilago sphaerogena | 2 |
| Ustilago syntherismae | 1 |
| Vaccinia virus | 1 |
| Vaccinium myrtillus | 1 |
| Vaccinium vitis-idaea | 1 |
| Vanilla planifolia | 2 |
| Vanrija humicola | 1 |
| Variovorax paradoxus | 1 |
| Variovorax paradoxus B4 | 1 |
| Variovorax sp. PBS-H4 | 1 |
| Variovorax sp. SRS16 | 1 |
| Variovorax sp. WDL1 | 1 |
| Veillonella parvula | 5 |
| Vernicia fordii | 1 |
| Vernonia galamensis | 1 |
| Vertebrata lanosa | 1 |
| Verticillium sp. DSP | 1 |
| Vibrio alginolyticus | 3 |
| Vibrio alginolyticus NBRC 15630 = ATCC 17749 | 2 |
| Vibrio anguillarum serovar O1 | 1 |
| Vibrio anguillarum serovar O2 | 1 |
| Vibrio cholerae | 12 |
| Vibrio cholerae 569B | 1 |
| Vibrio cholerae non-O1 | 2 |
| Vibrio cholerae O1 | 3 |
| Vibrio cholerae O1 biovar El Tor str. N16961 | 2 |
| Vibrio cholerae O139 | 2 |
| Vibrio cholerae O37 | 1 |
| Vibrio fluvialis JS17 | 1 |
| Vibrio furnissii | 2 |
| Vibrio harveyi | 5 |
| Vibrio parahaemolyticus | 4 |
| Vibrio sp. AX-4 | 1 |
| Vibrio sp. EJY3 | 1 |
| Vibrio sp. JT0107 | 1 |
| Vibrio sp. K-7 | 1 |
| Vibrio sp. XY-214 | 1 |
| Vibrio vulnificus | 2 |
| Vibrio vulnificus CMCP6 | 3 |
| Vibrionaceae | 1 |
| Viburnum furcatum | 1 |
| Vicia faba | 6 |
| Vicia faba Chukyo | 1 |
| Vicia sativa nigra | 1 |
| Vigna aconitifolia | 3 |
| Vigna angularis | 3 |
| Vigna radiata | 2 |
| Vigna radiata radiata | 10 |
| Virgibacillus pantothenticus | 3 |
| Vitis labrusca | 1 |
| Vitis labrusca x Vitis vinifera | 1 |
| Vitis vinifera | 14 |
| Vogesella indigofera | 1 |
| Vulcanisaeta distributa | 1 |
| Wachendorfia thyrsiflora | 1 |
| Watasenia scintillans | 1 |
| Weissella confusa | 1 |
| Weissella paramesenteroides | 1 |
| Weissella viridescens | 2 |
| Wickerhamiella galacta | 1 |
| Wickerhamomyces anomalus | 1 |
| Wickerhamomyces mucosus | 1 |
| Wolinella succinogenes | 3 |
| Wolinella succinogenes DSM 1740 | 1 |
| Wollastonia biflora | 1 |
| Xanthobacter | 4 |
| Xanthobacter agilis | 1 |
| Xanthobacter autotrophicus | 3 |
| Xanthobacter autotrophicus Py2 | 5 |
| Xanthobacter flavus | 1 |
| Xanthobacter flavus 14p1 | 3 |
| Xanthomonas arboricola | 3 |
| Xanthomonas axonopodis | 2 |
| Xanthomonas campestris | 10 |
| Xanthomonas campestris pv. campestris | 1 |
| Xanthomonas citri | 2 |
| Xanthomonas oryzae | 4 |
| Xanthomonas oryzae pv. oryzae | 1 |
| Xanthomonas sp. 35Y | 2 |
| Xanthomonas translucens | 1 |
| Xanthophyllomyces dendrorhous | 6 |
| Xanthothecium peruvianum | 1 |
| Xenopus laevis | 1 |
| Xenorhabdus nematophila ATCC 19061 | 1 |
| Xylella fastidiosa | 1 |
| Yarrowia lipolytica | 5 |
| Yersinia enterocolitica | 6 |
| Yersinia enterocolitica (type O:8) | 1 |
| Yersinia frederiksenii | 1 |
| Yersinia intermedia | 1 |
| Yersinia kristensenii | 1 |
| Yersinia pestis | 2 |
| Yersinia pseudotuberculosis | 8 |
| Yersinia pseudotuberculosis (type O:2a) | 1 |
| Yersinia ruckeri | 1 |
| Yersinia sp. EA015 | 1 |
| Yoonia vestfoldensis SKA53 | 1 |
| Zea luxurians | 1 |
| Zea mays | 51 |
| Zea mays huehuetenangensis | 1 |
| Zea mays mays | 2 |
| Zea mays mexicana | 1 |
| Zea mays parviglumis | 1 |
| Zingiber officinale | 3 |
| Zingiber zerumbet | 2 |
| Zobellia galactanivorans | 4 |
| Zoogloea ramigera | 1 |
| Zygosaccharomyces rouxii | 1 |
| Zymomonas mobilis | 5 |
| [Bacillus] caldovelox | 1 |
| [Bacillus] selenitireducens | 1 |
| [Brevibacterium] flavum | 1 |
| [Butyribacterium] methylotrophicum | 1 |
| [Candida] berthetii | 1 |
| [Candida] boidinii | 4 |
| [Candida] dendrica | 1 |
| [Candida] ethanolica | 1 |
| [Candida] fennica | 1 |
| [Candida] gotoi | 1 |
| [Candida] incommunis | 1 |
| [Candida] inconspicua | 1 |
| [Candida] maris | 1 |
| [Candida] maritima | 1 |
| [Candida] methanosorbosa | 1 |
| [Candida] montana | 1 |
| [Candida] nanaspora | 1 |
| [Candida] nemodendra | 1 |
| [Candida] nitratophila | 1 |
| [Candida] norvegica | 1 |
| [Candida] odintsovae | 1 |
| [Candida] ovalis | 1 |
| [Candida] pini | 1 |
| [Candida] pseudolambica | 1 |
| [Candida] quercuum | 1 |
| [Candida] rhagii | 1 |
| [Candida] rugopelliculosa | 1 |
| [Candida] silvicultrix | 1 |
| [Candida] sonorensis | 1 |
| [Candida] sorboxylosa | 1 |
| [Candida] stellimalicola | 1 |
| [Candida] succiphila | 1 |
| [Candida] vartiovaarae | 1 |
| [Clostridium] hylemonae DSM 15053 | 3 |
| [Clostridium] scindens | 3 |
| [Clostridium] scindens ATCC 35704 | 3 |
| [Clostridium] sporosphaeroides | 1 |
| [Clostridium] symbiosum | 1 |
| [Flavobacterium] lutescens | 1 |
| [Haemophilus] ducreyi | 3 |
| [Nectria] haematococca | 2 |
| [Pseudomonas] geniculata | 2 |
| [Ruminococcus] gnavus | 1 |
| [Ruminococcus] gnavus ATCC 29149 | 5 |
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