Summary This Pathway/Genome Database (PGDB) was generated by the PathoLogic [1, 2] component of Pathway Tools software version 25.0 and MetaCyc [3] version 25.0 on 01-Jul-2021 21:12:15.
Genome
ContigTotal GenesProtein GenesRNA GenesPseudogenesSize (bp)NCBI Link
NZ_JADBEH0100000022,1862,08857412,381,381NCBI Assembly:GCF_014874165.1
NZ_JADBEH01000000188870188,110NCBI Assembly:GCF_014874165.1
Total:2,2742,17557422,469,491
Ortholog data available?No
Database Contents
Genes2,274
Pathways197
Enzymatic Reactions1,029
Transport Reactions56
Polypeptides2,176
Protein Complexes26
Enzymes576
Transporters209
Compounds777
Transcription Units1,466
tRNAs48
Protein Features2,718
Database Version29.0
Sequence SourceGCF_014874165.1
Synonyms Micrococcaceae bacterium YIM 65004
Micrococcus sp. JKR76
Taxonomic Lineage cellular organisms
Bacteria <bacteria>
Terrabacteria group
Actinomycetota
Actinomycetes
Micrococcales
Micrococcaceae
Micrococcus
Micrococcus yunnanensis
Genetic Code Number 11 -- Bacterial, Archaeal and Plant Plastid (same as Standard, except for alternate initiation codons)
BIOSAMPLESAMN15741210
NCBI BioProjectPRJNA224116
NCBI-Taxonomy566027
Annotation ProviderNCBI RefSeq
Annotation Date2020-10-10
Annotation PipelineNCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Pipeline Version4.13
Annotation CommentBest-placed reference protein set; GeneMarkS-2+
NCBI Genome Typerepresentative


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Page generated by Pathway Tools version 29.0 (software by SRI International) on Sun Jun 15, 2025, BIOCYC18A.