Summary This Pathway/Genome Database (PGDB) was generated by the PathoLogic [1, 2] component of Pathway Tools software version 24.5 and MetaCyc [3] version 24.1 on 09-Jul-2020 18:36:28.
Genome
RepliconTotal GenesProtein GenesRNA GenesPseudogenesSize (bp)NCBI Link
NZ_CP0250254,6854,567118524,703,554RefSeq:NZ_CP025025
Ortholog data available?Yes
Database Contents
Genes4,737
Pathways271
Enzymatic Reactions1,286
Transport Reactions99
Polypeptides4,569
Protein Complexes51
Enzymes822
Transporters514
Compounds903
Transcription Units3,362
tRNAs85
Protein Features5,492
GO Terms2
Database Version29.1
Sequence SourceGCF_002874535.1
Synonyms Bacillus sp. YKJ-10
Bacillus sp. YKJ-11
Taxonomic Lineage cellular organisms
Bacteria <bacteria>
Terrabacteria group
Bacillota
Bacilli
Bacillales
Bacillaceae
Bacillus <firmicutes>
Bacillus jeotgali
Genetic Code Number 11 -- Bacterial, Archaeal and Plant Plastid (same as Standard, except for alternate initiation codons)
BIOSAMPLESAMN07212156
NCBI BioProjectPRJNA224116
NCBI-Taxonomy129985
EnvironmentKorean traditional fermented seafood jeotgal
Geographic LocationKorea
Collection Date2001
Annotation ProviderNCBI RefSeq
Annotation Date2020-05-10
Annotation PipelineNCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Pipeline Version4.11
Annotation CommentBest-placed reference protein set; GeneMarkS-2+
NCBI Genome Typerepresentative


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Page generated by Pathway Tools version 29.0 (software by SRI International) on Fri Dec 12, 2025, BIOCYC19B.